Amin009977.1
Basic Information
- Insect
- Anopheles minimus
- Gene Symbol
- bab2
- Assembly
- GCA_000349025.1
- Location
- KB663721.1:19965806-20055787[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 8.2e-12 1.5e-08 33.7 0.0 2 39 692 730 691 734 0.90 2 4 2.6e-12 4.9e-09 35.3 0.1 2 39 746 783 745 786 0.94 3 4 4e-18 7.4e-15 53.9 0.0 3 45 802 845 800 845 0.97 4 4 2.8e-17 5.1e-14 51.3 0.0 1 43 852 895 852 896 0.96
Sequence Information
- Coding Sequence
- atggataCCAAAGCAGCATCAGCGGGACCCGCCCCGACGCATTTACCCTCGTCCACATATCCGGCGACGTCCCCCTACTCGAAGGGTGCCCGGTCGTCGCATCAGTATTTTAGTCTAAGATGGAACAACTACCAATCGAACATGACATCCGTGTTTCACGAGCTGCTCGAGTCACAATCCTTCGTCGATGTTACGCTAGCCTGCGAATACAATTCGCTAAAGGCACACAAGGTGGTACTGTCGGCGTGTTCggcatattttcaaaaaattctcCTCGACAACCCGTGCAAGCATCCGACCATTATACTGCCGGCAGATATCTGCTTTTCCGATCTGCAGTTCATCATCGAGTTTGTGTACCGTGGTGAAATCGACGTATCCGAGGCAGAACTGCAGAGTTTATTACGGACGGCAGAACAGCTAAAAATTAAGGGTCTCTGTGAGGTGGGCGAACCACAGTACGAGCAGGATTATTCGCCCGCGCTAAAGCGTTACAAACCGTACCGGTCACGATCGCCACCGGACAACCGgcatcagcaccatcaccaccagcaaccaccgcccccaccaccaccccccTCCGGTTCATCCGGCACGAGTAGCGGTGGTCGGTCCGGTTCCGGAGCAgtaggaggaggaggaggaggtggaTCGCACGGAAGTGGCAGCGGCGGTAGCAGTAACAATAACAGTTCGTCTTCCTCCCAATCGACGGGATACAGCGAGAACGGCAAGGGCTGTAGCACGGGCAAGGGCGGTAGCGGTGGAGGTGGAACAGGAGGCGGTGGAGTAGGAGGGATAGGATCGGGGGTAGGAGGACGTAGCCTGTATCATCACCCGctgcaccatcaccatcatcaccatcatccgcaCCTGCACCATCTGCATCAGTTACCGCACGGCGGTGAGACGCGAACGCCTGGCGGCCATATTGTCGACGAGGACGATGATGGATCGCCGTCCTCGGTGTTAGTGGTCGAAACGCACGATCTAAGCACAACCGGGTCGAAGGAAAAGCATTACCAGCATCAGcagtcgcagcagcagcaccaccttCATCATCCTCACCATCCGCATCATCCGTCGTCGCAGCAGCATCCCCTCGGAAGCAAAATGGCCAGCCTAGGGATGGGCGTTGGAATAAATGGTTCCGTAATGGGCGTACCTATGGGTTATTTGGATTTTGCACCAGAGCCTCCAGCACCGACGGCGACACCGGTGACAGAACATGTGGACATTAATTGTGCGCCTAGCAGCCACGATACACGTGATCTGTCCAATTCTGTGCCAAACGATGGTGACTTACGAGTGAAATTCGAAACGTTACGTTCGCTAGATCCTCCCAATGCGGTACAACTGGACAATCACGCCGTCagtcatcagcagcagcagcagcagctccaccatcagcaacagcaggcgcaacagcaacagctattgcagcaacagcatttactacagcagcagcagcagcagcagcaacagcaacaaagaCAGACACCTCAGCCACCGGGagctcaacagcagcaaaacgatcaCCAGCGGCACTCGCCTCCGcacatgcagcagcaacaacaacagcacgtGATGTTGAtggatcagcagcagcagcagcagcaacagcagcaccatccAACAACGCATAGTCCGGCATCGAGCgtatcgtcatcgtcatccaGCCAGCATCCGGAGAACTTAGTGACTGGAAGTGGTGGTGCTGGTTCCGTAACACCTGGCCCGgccaccaacaacagcaatggAAATGGGGGCGGTCCACCGGCGGGTGGGGACGAGATGAAGCCCAGACTGAATCTGAAGCAGGAAAACCTTAGTGATGGTGGTAACGatcaacatcaaacgatgGAGGTCGAGCAGGATCAATCGTCCATGCACGGCATGGTTGTGACACCGGAAATTTCGGGTATCATGAACCAGAGTCAAATGAGCGATATGTATCAGTCGGATGCGAGTGAAGACTCGAAGGTGGGAATTTTGGATGGATCGTCGATACAGTACACCAATCTGACAAGTCCGAATGAGGCAAAAACGCCTACCGGGCCGAAAACGTGGACAGCGGAAGATATGGAATCGGCGCTCGAAGCGCTACGTTCACACAACATGAGCTTGACAAAGGCATCTGCCACATACGGTATTCCATCGACGACACTGTGGCAACGTGCGCACCGGCTAGGCATTGATACGCCGAAGAAGGAGGGCCCGTCCAAGACGTGGAATGAGGATTCGCTCAACAGTGCACTGGAAGCGCTCCGGACGGGTACGATCTCCGCGAACAAAGCGTCGAAAGCGTTCGGCATACCGTCGTCCACGCTGTACAAGATAGCGCGCCGCGAAGGCATCCGCCTGGCGGCACCGTTCAATGCGGCACCCACCACCTGGTCCGCGGAGGATCTGGACCGTGCCTTGGAAGCGATCCGTGCCGGGCAAACGTCGGTACAGAAGGCCAGTACGGAGTTCGGCATCCCGACCGGCACGCTGTACGGGCGCTGCAAGCGCGAGGGCATCGAGCTGTCCCGGTCCAATCCTACGCCCTGGTCCGAAGATGCAATGATGGAGGCCTTGGAGTCCGTTAAACAAGGACACATGTCGATCAATCAGGCCGCCATCCACTACAATCTGCCGTACAGCTCGCTGTACGGTCGGTTCAAACGGGGCAAGTACGATACGCCCAGTTCGGGAGGCGGCAGCGGTGGCAGTTCGTccaatgctgctgctgctgctgctgctaccggtggtggtggtggtggcggcggcggcggcgcAGCCAGTGGCGGTAGTAATGGTGGCGCCAACGCCACCAGTGCCGGTACCGGTGGCAGTAATGTTGGCGGTAGTCCCCAGATGGAGTTTAAGATAGAACCACAGCATAACGATCATAGTCCAGAGAACACGCAACATTACAATCCTGCACTATCGGCTTCCTCGACGCCTACAAGTAACACACcgacccagcagcagcagcagcagcaacaacagcagcagcaacagcaacagcaacagcagcagcagcaacttaCCCACCATTTAGTGCAACAGTCTCCATCGGTACTGCCGGTCAGCATTCACATTGTCGATGccgctcatcatcatcttccgcATCCCCACCAGCAActacaccaccagcagcaacagcagctgaCGCAACCGCAACACGTCGTGGTGgcacagcatcagcagcagcagcaacatcatcatctgcaCCATCAGCCACAGCTAATACAGCATCACATCATTCCGCAGCAGCATCACATCATCTATCAGCAGCCGCTGCAACCGATCCAGCAGCAGCCCCAGTACCATCCGATGTATCACATCATCAAGCAGGAAAATGATAGAAGTTGA
- Protein Sequence
- MDTKAASAGPAPTHLPSSTYPATSPYSKGARSSHQYFSLRWNNYQSNMTSVFHELLESQSFVDVTLACEYNSLKAHKVVLSACSAYFQKILLDNPCKHPTIILPADICFSDLQFIIEFVYRGEIDVSEAELQSLLRTAEQLKIKGLCEVGEPQYEQDYSPALKRYKPYRSRSPPDNRHQHHHHQQPPPPPPPPSGSSGTSSGGRSGSGAVGGGGGGGSHGSGSGGSSNNNSSSSSQSTGYSENGKGCSTGKGGSGGGGTGGGGVGGIGSGVGGRSLYHHPLHHHHHHHHPHLHHLHQLPHGGETRTPGGHIVDEDDDGSPSSVLVVETHDLSTTGSKEKHYQHQQSQQQHHLHHPHHPHHPSSQQHPLGSKMASLGMGVGINGSVMGVPMGYLDFAPEPPAPTATPVTEHVDINCAPSSHDTRDLSNSVPNDGDLRVKFETLRSLDPPNAVQLDNHAVSHQQQQQQLHHQQQQAQQQQLLQQQHLLQQQQQQQQQQQRQTPQPPGAQQQQNDHQRHSPPHMQQQQQQHVMLMDQQQQQQQQQHHPTTHSPASSVSSSSSSQHPENLVTGSGGAGSVTPGPATNNSNGNGGGPPAGGDEMKPRLNLKQENLSDGGNDQHQTMEVEQDQSSMHGMVVTPEISGIMNQSQMSDMYQSDASEDSKVGILDGSSIQYTNLTSPNEAKTPTGPKTWTAEDMESALEALRSHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPSKTWNEDSLNSALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWSAEDLDRALEAIRAGQTSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMMEALESVKQGHMSINQAAIHYNLPYSSLYGRFKRGKYDTPSSGGGSGGSSSNAAAAAAATGGGGGGGGGGAASGGSNGGANATSAGTGGSNVGGSPQMEFKIEPQHNDHSPENTQHYNPALSASSTPTSNTPTQQQQQQQQQQQQQQQQQQQQQLTHHLVQQSPSVLPVSIHIVDAAHHHLPHPHQQLHHQQQQQLTQPQHVVVAQHQQQQQHHHLHHQPQLIQHHIIPQQHHIIYQQPLQPIQQQPQYHPMYHIIKQENDRS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00108305;
- 90% Identity
- iTF_00101769;
- 80% Identity
- iTF_00105234;