Amac001436.2
Basic Information
- Insect
- Anopheles maculipalpis
- Gene Symbol
- -
- Assembly
- GCA_943734865.1
- Location
- CALSEK010000024.1:591203-601327[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 9.5e-12 1.7e-08 33.9 0.0 2 39 589 627 588 631 0.90 2 4 3.1e-12 5.4e-09 35.5 0.1 2 39 643 680 642 683 0.94 3 4 4.7e-18 8.2e-15 54.1 0.0 3 45 699 742 697 742 0.97 4 4 3.2e-17 5.6e-14 51.4 0.0 1 43 749 792 749 793 0.96
Sequence Information
- Coding Sequence
- ATGGATGAGGTAGGAGGAGGAGGAGGAAAGGGAGGGGCGGTAGTAGATGATGCATTGAGTTTATTACGAACAGCGGAACAGCTTAAAATTAAAGGCCTGTGTGAGGTTGGCGAACCACAGTACGAGCAGGACTACTCGCCAGCGTTAAAACGCTACAAACCGTATCGGTCACGATCGCCACCGGACAACCGCCATCAGCACCATCACCACCAACAACCTCCACCGCCACCACCACCACCGTCCGGCTCATCAGGCACGAGTAGCGGTGGCCGTTCCGGTTCCGCAGGAGGTGGAGGAGGATCGCACGGGAGTggtagcagtggcagcaacaacaacaataacagttcgtcttcctcccAATCGACGGGATACAGTGAGAACGGCAAAGGCTGTAGTACGGGCAAAGGAGGAAGCGGCGGAGGAGGAGGAGGAGGAGGAGGGACAGGATCTGGGATAGGGCGCGGTCTTTATCATCCTTCTcagcatcatcacccgctacaccaccatcatcatcatcatccgcacctgcatcatctgcatcatcagttaccgggtgatccacgaacgcctggcggccatcttatcgacgacgacgatgatggatcaccgtcatcggtgttagtggtggaaacgcacgatctaagcacatctgcttcgaaggataagcattatcagcagcagcagcagcatcaccatccatcgcagcaacagcatcatcatcacccgcatcatcctcatcatcagccatctcatcagcagcagcatcctctcggaagcaaaatggccagcctAGGGATGGGCGTTGGAATAAATGGTGGTTCCGTTATGGGAGTTCCGATGGGATATTTGGATTTTGCACCAGAGCCTCCAGCACCGACGGCGACACCAGTGACAGAGCATGTGGATATAAATTGTGCGCCCAGTAGCCACGATACACGTGACCTGTCCAGTAAGTATTCTGTGCCAAACGATGGTGATTTACGAGTGAAATTCGAAACGTTACGTTCGCTAGATCCTCCCAATGCGGTAcaactggacaatcacgctgtcagccatcagcaacagcagcagcagctacatcagcatcaacaacagcaggcgcaacagcaacagctcctacagcaacagcatttactacagcagcagcagcagcagcagcagcagcaacagcagcaggctcagcaacagcagcaaagacagacacctcagccaccgggagccccgcagcagcagcagcagcagcaaaacgatcaccagcgacactcgccaccgcacatgcagcaacaacacgtgatgatgatggatcagcagcaacagcagcaccatccaaccacacacagtccagcgtcaagcgtgtcctcatcgtcatccagccagcatccggagaatctggttactggtagcggtgcggcaggctctgtaacacccggaccgcccaccaacagcagcaATGGTGCTGGCGGTCCACCGGCGGTCGGCGAGGAGATGAAGCCCAGACTGAATCTGAAACAGGAAAACCTTAGCGATGGTGCGGATCAGCAACATCAAACGATGGAGGTCGAGCAGGATCAATCGTCAATGCACGGCATGGTGGTAACGCCAGAAATTTCGGGCATCATGAACCAGAGTCAAATGAGCGATATGTATCAGTCGGACGCAAGTGAAGACTCGAAAGTTGGCATTCTGGATGGGTCCTCGATGCAGTACACAAATTTGACTAGCCCGAACGAAGCAAAAACGCCAACTGGGCCGAAAACGTGGACTGCAGAAGATATGGAATCGGCACTAGAAGCGCTACGCTCTCACAATATGAGCTTAACGAAGGCATCTGCTACGTACGGTATTCCATCGACGACTCTGTGGCAGCGGGCCCATCGGCTTGGCATTGATACGCCGAAAAAGGAGGGTCCGTCTAAAACGTGGAACGAAGATTCGCTCAACAGCGCCCTGGAAGCGCTGCGGACGGGTACAATCTCCGCCAACAAAGCTTCCAAGGCATTCGGCATCCCGTCGTCCACGCTGTACAAGATAGCGCGCCGTGAGGGCATCCGTCTGGCGGCACCTTTCAATGCTGCACCAACCACCTGGTCTGCGGAGGATCTGGACCGTGCCTTGGAAGCGATCCGTGCGGGACAAACTTCGGTCCAGAAAGCTAGTACAGAGTTTGGCATACCGACCGGTACGCTGTACGGGCGCTGTAAGCGCGAGGGCATCGAACTGTCCCGTTCCAATCCGACGCCCTGGTCTGAAGATGCAATGATGGAGGCCTTGGAATCTGTAAAACAAGGACACATGTCGATCAATCAAGCCGCCATCCACTATAACCTACCGTACAGCTCACTGTACGGTCGGTTCAAACGGGGCAAATACGATACGCCCAGCTCGGGAGGCGGCGGCGGCGGTGGCGGTGGCAGTTCGTCCAAtgctgctgctgctgctgctgctaccggtggtggtggtggtggcgcaggcagtggcggcaccaacggtggcggcaacaacgccaccagtgccggtacaggtggcAGTAATGTTGGCGGTAGTCCCCAGATGGAGTTTAAGATAGAACCACAGCATAACGATCATAGTCCCGAGAACACGcaacattacaatcctgcactatcggcctcctcgacgcctacaagtaacacaccgacgcagcagcagcagcagcagcagcaacaacaacagcagcagcaacaacagcaacaacaacagcaacagcagcaacaaattacccaccatttagttcaacaatctccatcagtgctaccggttagcattcacatcgtcgacgctgctgcccatcaccatctaacgcatccgcaccagcaactgcaccatcagcagcagcaacaacttacgcagccgcagcacgtggtggtggcgcagcatcagcagcagcaacagcaccatcatctgcatcaccagccgcagctaatacagcatcacatcattccgcagcagcatcacatcatctatcagcagccgttgcaaccgatccagcagcaaccacagtatcatccgatgtatcacatcatcaagcaggaaaatgatagaagttga
- Protein Sequence
- MDEVGGGGGKGGAVVDDALSLLRTAEQLKIKGLCEVGEPQYEQDYSPALKRYKPYRSRSPPDNRHQHHHHQQPPPPPPPPSGSSGTSSGGRSGSAGGGGGSHGSGSSGSNNNNNSSSSSQSTGYSENGKGCSTGKGGSGGGGGGGGGTGSGIGRGLYHPSQHHHPLHHHHHHHPHLHHLHHQLPGDPRTPGGHLIDDDDDGSPSSVLVVETHDLSTSASKDKHYQQQQQHHHPSQQQHHHHPHHPHHQPSHQQQHPLGSKMASLGMGVGINGGSVMGVPMGYLDFAPEPPAPTATPVTEHVDINCAPSSHDTRDLSSKYSVPNDGDLRVKFETLRSLDPPNAVQLDNHAVSHQQQQQQLHQHQQQQAQQQQLLQQQHLLQQQQQQQQQQQQQAQQQQQRQTPQPPGAPQQQQQQQNDHQRHSPPHMQQQHVMMMDQQQQQHHPTTHSPASSVSSSSSSQHPENLVTGSGAAGSVTPGPPTNSSNGAGGPPAVGEEMKPRLNLKQENLSDGADQQHQTMEVEQDQSSMHGMVVTPEISGIMNQSQMSDMYQSDASEDSKVGILDGSSMQYTNLTSPNEAKTPTGPKTWTAEDMESALEALRSHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPSKTWNEDSLNSALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWSAEDLDRALEAIRAGQTSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMMEALESVKQGHMSINQAAIHYNLPYSSLYGRFKRGKYDTPSSGGGGGGGGGSSSNAAAAAAATGGGGGGAGSGGTNGGGNNATSAGTGGSNVGGSPQMEFKIEPQHNDHSPENTQHYNPALSASSTPTSNTPTQQQQQQQQQQQQQQQQQQQQQQQQQITHHLVQQSPSVLPVSIHIVDAAAHHHLTHPHQQLHHQQQQQLTQPQHVVVAQHQQQQQHHHLHHQPQLIQHHIIPQQHHIIYQQPLQPIQQQPQYHPMYHIIKQENDRS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00108305;
- 90% Identity
- iTF_00101769;
- 80% Identity
- -