Aepi009331.1
Basic Information
- Insect
- Anopheles epiroticus
- Gene Symbol
- bab2
- Assembly
- GCA_000349105.1
- Location
- KB670292:112882-202012[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 9.4e-12 1.4e-08 33.7 0.0 2 39 679 717 678 721 0.90 2 4 3e-12 4.4e-09 35.3 0.1 2 39 733 770 732 773 0.94 3 4 4.6e-18 6.8e-15 53.9 0.0 3 45 789 832 787 832 0.97 4 4 3.2e-17 4.6e-14 51.3 0.0 1 43 839 882 839 883 0.96
Sequence Information
- Coding Sequence
- ATGGATACCAAAGCAGCATCTGCCGGGCCCGCCCCGACGCATTTACCTTCGTCCACATATCCAGCGACGTCCCCGTACTCGAAGGGTGCCCGGTCGTCGCATCAGTATTTTAGCTTAAGATGGAACAACTACCAGTCGAACATGACGTCCGTGTTCCACGAGCTGCTCGAGTCGCAGTCCTTCGTCGACGTCACGCTCGCCTGCGAGTACAACTCGCTCAAGGCGCACAAGGTGGTTCTGTCCGCGTGTTCGGCATACTTTCAAAAAATTCTCCTGGACAACCCGTGCAAGCATCCGACCATCATACTGCCGGCTGACATATGCTTTTCCGACCTGCAGTTCATCATCGAGTTTGTGTATCGCGGCGAAATCGACGTTTCCGAGGCAGAGCTACAGAGTTTATTACGGACGGCCGAGCAGCTAAAAATCAAAGGTCTGTGTGAGGTGGGCGAACCACAGTACGAGCAGGACTACTCACCCGCCTTAAAGCGTTACAAACCGTACCGGTCGCGATCGCCTCCGGACAATCGGCATCAGCACCACCACCATCAGCAACCACCGCCCCCACCACCCCCGTCCGGTTCGTCAGGATCGACTAGCGGTGGCCGTTCCGGTTCCTCAGCGCAAGGCGGAGGAGGAGGCGGAGCAGGAGGATCGCACGGCAGTGGCAGTGGTGGTAGTGGCAGCGGTAACAACAACAGTTCGTCTTCCTCCCAGTCGACGGGATACAGTGAGAACGGCAAGGGTAGCAGTGTTGCCGGAAAAAGTGGCAGTAGCGGAGTAGGAACAGGGCTAGCAGGAGCAGCAGGGTCTGGTTCCGGGCGCGGTCTTTACCACCCTTCgcagcatcatcacccgctgcaccatcatcatccgctgcaccatcatcaccatcatctgcatcaccCGTTGCCGCTCGGTGGTGACCCGCGGACGTCTGGCCATATTGTCGACGAAGACGATGATGGATCACCGTCGTCAGTGCTAGTGGTCGAAACGCACGATCTGACGACGACGGGTACGAAGGAGAAGCATTACCAGCAGCAGCAAcaccaccatcatccccaccaatcgtcccagcaccatcatccccatcatccgcatcatccgcagtctcagcagcatccccTCGGAAGCAAAATGGCCAGCCTAGGGATGGGCGTTGGAATAAATGGTGGTTCCGTTATGGGCGTATCGATGGGTTATTTGGATTTTGCACCAGAGCCTCCAGCACCGACGGCGACACCAGTGACAGAACATGTGGACATTAATTGTGCGCCTAGCAGCCACGATACACGTGATCTGTCCAATCCTCCCAACTCGGTGCAACTGGACAATCAaaccgtcagccatcagcagcagcttcaccatcagcagcagcagcaggcgcaacagcagcagcaacttctgcagcagcagcagcatatgctgcaacagcaggcgcaacaggcgcagcagctgcagcagcaacaaagacagacgccgcagcccgcgggagctcaacagcaaaatgaccatcagcggcactcgcccccgcacatgcagcagcaacagcacgtaatgctgatggatcagcagcagcagcaccaTCCAACCACACACAGTCCGGCGTCGAGCGTGTCGTCGTCATCGTCCAGCCAACATCCGGAGAACTTGGTGACTGGTGGCGGTGGTGCTGCTGGCTCGGTAACGCCTGGCCCACCAACCAACGGTAGCAACGGCAACGGTACAGGCCCGCAGGCAGGGGGCGACGATATGAAACCGAGACTGAACCTGAAGCAGGAAAATATTAGTGACGGCGCTGATCAGCAGCATCAAACGATGGAGGTCGAGCAGGATCAATCGTCGATGCACGGCATGGTGGTAACGCCGGAAATTTCAGGCATCATGAACCAGAGCCAGATGAGTGATATGTATCAGTCGGACGCCAGTGAAGACTCGAAGGTGGGCATTTTGGACGGCTCTTCCATGCAGTACACAAATCTGACCAGTCCCAACGAAGCAAAGACGCCTACCGGTCCGAAAACATGGACCGCAGAAGATATGGAATCAGCGCTAGAAGCACTACGTTCTCATAACATGAGCTTGACAAAGGCATCGGCAACGTACGGCATCCCATCGACGACACTGTGGCAGCGGGCCCACCGGCTTGGCATTGATACACCGAAAAAGGAGGGCCCGTCCAAAACGTGGAACGAAGATTCGCTCAACAGTGCGCTGGAAGCGCTCCGGACGGGTACGATCTCTGCCAACAAGGCCTCGAAAGCGTTCGGCATACCGTCGTCGACGCTGTACAAGATTGCCCGCCGCGAAGGCATCCGCCTGGCGGCACCGTTTAATGCCGCACCCACCACCTGGTCCGCGGAAGATTTGGACCGTGCCTTGGAAGCGATCCGTGCAGGGCAAACGTCGGTACAGAAAGCGAGCACCGAGTTTGGCATCCCGACCGGTACGCTGTACGGTCGCTGCAAGCGCGAGGGCATCGAACTATCCCGGTCCAATCCCACACCCTGGTCCGAGGACGCGATGATGGAGGCATTGGAATCTGTAAAGCAAGGACACATGTCGATCAATCAGGCCGCCATCCACTACAACCTACCGTACAGCTCACTGTACGGTCGGTTCAAACGGGGCAAGTACGATACGCCCAGCTCGGGAggcggcggcggcggcggTGGCAGTTCGTCCAAtgctgctgctgctgctgctACcggtggtggtagcggtgccggcagtggtggcggtagtggtggcggCAACGCCACTAGTGCCGGAACGGGTGGCAATAATGTTGGCAGTAGTCCCCAGATGGAGTTTAAAATAGAACCACAGCATAACGATCATAGTCCAGAGAACACGCAACATTACAATCCTGCACTATCGACTTCCTCGACGCCTACAAGTAATACACCGACccagcagcagcagcagcagcagcagcagcagcagcaacaacagcagcagcagcagcaacagcagcagcagcagcagcagcagcagcagcaacaacagcagcagcaacagcaacaacttgctcatcatttagtgcaacagcctccgtcagtgctaccggtcagcattcacattgtcgatgctgccgcccatcatcatcttccacatccgcatcagcaactgcatcaccagcagcagcagcaactgacgcagcctcagcacgtggtggtcgcgcagcaccagcagcagcagcagcatcaccatctgcaccatcagccacagctaatacagcatcacatcattccgcagcagcatcacatcatctatcagcagccgctgcaaccgatccagcagcagccacagtaccatccgatgtaccacatcatcaagcaggagaacgatcgaagttga
- Protein Sequence
- MDTKAASAGPAPTHLPSSTYPATSPYSKGARSSHQYFSLRWNNYQSNMTSVFHELLESQSFVDVTLACEYNSLKAHKVVLSACSAYFQKILLDNPCKHPTIILPADICFSDLQFIIEFVYRGEIDVSEAELQSLLRTAEQLKIKGLCEVGEPQYEQDYSPALKRYKPYRSRSPPDNRHQHHHHQQPPPPPPPSGSSGSTSGGRSGSSAQGGGGGGAGGSHGSGSGGSGSGNNNSSSSSQSTGYSENGKGSSVAGKSGSSGVGTGLAGAAGSGSGRGLYHPSQHHHPLHHHHPLHHHHHHLHHPLPLGGDPRTSGHIVDEDDDGSPSSVLVVETHDLTTTGTKEKHYQQQQHHHHPHQSSQHHHPHHPHHPQSQQHPLGSKMASLGMGVGINGGSVMGVSMGYLDFAPEPPAPTATPVTEHVDINCAPSSHDTRDLSNPPNSVQLDNQTVSHQQQLHHQQQQQAQQQQQLLQQQQHMLQQQAQQAQQLQQQQRQTPQPAGAQQQNDHQRHSPPHMQQQQHVMLMDQQQQHHPTTHSPASSVSSSSSSQHPENLVTGGGGAAGSVTPGPPTNGSNGNGTGPQAGGDDMKPRLNLKQENISDGADQQHQTMEVEQDQSSMHGMVVTPEISGIMNQSQMSDMYQSDASEDSKVGILDGSSMQYTNLTSPNEAKTPTGPKTWTAEDMESALEALRSHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPSKTWNEDSLNSALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWSAEDLDRALEAIRAGQTSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMMEALESVKQGHMSINQAAIHYNLPYSSLYGRFKRGKYDTPSSGGGGGGGGSSSNAAAAAATGGGSGAGSGGGSGGGNATSAGTGGNNVGSSPQMEFKIEPQHNDHSPENTQHYNPALSTSSTPTSNTPTQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQLAHHLVQQPPSVLPVSIHIVDAAAHHHLPHPHQQLHHQQQQQLTQPQHVVVAQHQQQQQHHHLHHQPQLIQHHIIPQQHHIIYQQPLQPIQQQPQYHPMYHIIKQENDRS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00108305;
- 90% Identity
- iTF_00099750;
- 80% Identity
- iTF_00099750;