Afun009382.1
Basic Information
- Insect
- Anopheles funestus
- Gene Symbol
- bab2
- Assembly
- None
- Location
- Contig0:20508069-20588732[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 8.4e-12 1.8e-08 33.7 0.0 2 39 707 745 706 749 0.90 2 4 2.7e-12 5.7e-09 35.3 0.1 2 39 761 798 760 801 0.94 3 4 4.1e-18 8.7e-15 53.9 0.0 3 45 817 860 815 860 0.97 4 4 2.8e-17 5.9e-14 51.2 0.0 1 43 867 910 867 911 0.96
Sequence Information
- Coding Sequence
- ATGGATACCAAAGCAGCATCAGCGGGACCCGCTCCGACGCATTTACCCTCGTCCACATATCCAGCGACGTCACCGTACTCGAAGGGTGCCCGGTCGTCGCATCAGTATTTTAGTCTAAGATGGAACAACTACCAATCCAACATGACATCCGTGTTTCACGAGCTGCTCGAGTCACAGTCCTTCGTCGATGTAACGCTAGCCTGTGAATACAATTCACTGAAGGCGCACAAGGTGGTGCTGTCGGCGTGTTCGGCATATTTTCAAAAAATTCTCCTTGACAACCCGTGCAAGCATCCGACCATTATACTGCCGGCCGATATCTGCTTTTCCGATCTGCAGTTCATCATCGAGTTTGTCTACCGTGGCGAAATTGATGTATCCGAGGCAGAACTACAGAGTTTATTGCGGACTGCAGAACAGCTCAAAATTAAGGGTCTGTGTGAGGTGGGCGAACCACAGTACGAACAGGATTATTCGCCCGCGTTAAAACGTTACAAACCGTACCGGTCACGATCGCCACCGGATAACCGGCATCAGCACCATCACCATCAGCAACCACCGCCCCCACCACCACCACCGTCCGGCTCATCGGGCACGAGTAGCGGTGGCCGGTCTGGCAGTTCTGGAGCAGTAGGAGGAGGAGGAGGAGGTGGTGGAGCAGGATCGCACGGGAGTGGTAGCGGTGGTGGCAGTAACAATAACAGTTCGTCTTCCTCCCAATCGACGGGATACAGTGAGAACGGCAAGGGCTGCAGTACGGGCAAGGGTGGTAGTGGCGGAGGTGGAGGAGGAGGAGGCGGAGGAGGCGGTGGAGGTGGAATAGGATCGGGAGCAGGGCGTAGTCTGTATCATCCTTCCCAGCATCATCACCCGCTGCACCATCACCATCATCATCACCATCCGCACCTGCATCATCTGCATCAGCTTCCGCACGGAGTCGGTGACACACGAACGTCTGGCGGCCATATTGTCGACGAGGACGATGATGGATCACCGTCCTCGGTGTTAGTGGTCGAAACGCACGATCTAAGCACAACTGGTTCGAAGGATAAACATTATCAGCAGCATCATCATCAGTCGCAGCAACAGCAGCACCATCATCCTCACCATCCCCATCATCAGCCGTCGCAGCAGCATCCCCTCGGAAGCAAAATGGCCAGCCTAGGGATGGGCGTTGGAATAAATGGTTCCGTTATGGGCGTACCTATGGGTTATTTGGATTTTGCACCAGAGCCTCCAGCACCGACAGCGACACCAGTGACAGAACATGTGGACATTAATTGTGCGCCTAGTAGCCACGATACACGTGATCTGTCCAGTAAGTATTCTGTGCCAAACGATGGTGATTTACGAGTGAAATTCGAAACGTTACGTTCGCTAGATCCTCCCAATGCGGTTCAACTGGACAATCACGCTGTCAGCCATCAGCAGCAGTTACACCATCAACAGCAGCAAGCGCAACAGCAGCAAGCGCTTTTGCAACAACAGCATTTACTACAACAGCAGCAGCAGCAACAGCAGCAGCAACAGCAACAAAGACAGACACCTCAACCAACGGGAGCTCAACAGCAGCAAAACGATCACCAACGGCACTCGCCACCGCACATGCAACAGCAGCAGCAACAGCAGCAGCAGCACGTGATGCTGATGGATCAGCAGCAACAACACCATCCAACTACGCATAGTCCGGCATCGAGCGTATCGTCCTCCTCATCCAGCCAGCATCCGGAGAATTTAGTAACCGGTAGTGGTGCGGCCGGATCCGTCACACCGGGCCCGCCCACCAACAATATCAACGGCAACGGTGGTGGTCCACCGGCAGGAGGTGCGGATGAGATGAAGCCCCGACTGAATCTGAAGCAGGAAAACCTTAGCGATGGTGGTGGCGATCAGCAACATCAAACGATGGAGGTCGAACAGGATCAATCGTCGATGCACGGTATGGTGGTGACACCGGAAATTTCGGGCATCATGAACCAGAGCCAAATGAGCGATATGTATCAGTCGGATGCAAGCGAAGACTCAAAAGTTGGCATACTGGATGGATCGTCGATACAGTACACAAACCTGACGAGTCCGAACGAGGCGAAAACGCCTACCGGGCCAAAAACATGGACTGCAGAAGATATGGAATCGGCGCTTGAAGCGCTACGTTCACACAACATGAGCTTGACGAAGGCATCTGCTACATACGGTATTCCATCCACGACACTGTGGCAGCGTGCCCACCGGCTCGGCATTGATACGCCGAAAAAGGAAGGTCCGTCTAAAACGTGGAACGAAGATTCGCTCAACAGTGCACTGGAAGCGCTGCGGACGGGTACGATCTCCGCCAACAAAGCCTCGAAGGCGTTCGGCATACCGTCGTCCACGTTGTACAAGATAGCGCGCCGTGAAGGTATCCGGCTGGCGGCACCGTTCAATGCGGCACCCACCACCTGGTCCGCGGAGGATCTGGACCGTGCCTTGGAAGCGATCCGTGCCGGACAAACGTCGGTGCAGAAGGCAAGTACGGAGTTCGGCATCCCAACCGGTACGCTGTACGGGCGCTGTAAACGCGAAGGGATCGAACTGTCCCGTTCCAATCCAACGCCCTGGTCGGAAGATGCAATGATGGAGGCCTTGGAGTCCGTTAAGCAAGGACACATGTCGATCAATCAAGCCGCCATCCACTACAATCTACCGTACAGCTCACTGTACGGTCGATTCAAACGGGGCAAGTATGATACGCCCAGCTCGGGAGGCGGCGGCGGCGGCGGTGGCAGTTCGTCTAATGCTGCTGCTGCTGCTGCTGCTACCGGTGGTGGCGGTGGCGCAGGCAGTGGCGGCAGTAATGGTGGCGCCAACGCCACTAGTGCCGGTACAGGTGGCAGTAATGTTGGCGGTAGTCCCCAGATGGAGTTTAAGATAGAACCACAGCATAACGATCATAGTCCAGAGAACACGCAACATTACAATCCTGCACTATCGGCTTCCTCGACGCCTACAAGTAATACGCCGACGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAACAGCAACAGCAACAGCAGCAGCAGCAACAGCAGCAACAACTTACCCACCATTTAGTTCAACAGTCTTCATCGGTACTACCGGTTAGCATTCACATTGTTGATGCGGCCCATCATCATCTTTCGCATCCTCACCAGCAACTGCACCACCAGCAGCAGCAGCAACTAACGCAACCGCAACACGTGGTGGTAGCGCAACATCAGCAGCAGCAGCAGCATCATCATCTGCACCATCAGCCACAGCTAATACAGCATCACATCATTCCGCAGCAACATCACATCATCTATCAGCAGCCGCTGCAACCGATCCAGCAGCAACCGCAGTATCATCCGATGTATCACATCATCAAGCAGGAAAATGATAGAAGTTGA
- Protein Sequence
- MDTKAASAGPAPTHLPSSTYPATSPYSKGARSSHQYFSLRWNNYQSNMTSVFHELLESQSFVDVTLACEYNSLKAHKVVLSACSAYFQKILLDNPCKHPTIILPADICFSDLQFIIEFVYRGEIDVSEAELQSLLRTAEQLKIKGLCEVGEPQYEQDYSPALKRYKPYRSRSPPDNRHQHHHHQQPPPPPPPPSGSSGTSSGGRSGSSGAVGGGGGGGGAGSHGSGSGGGSNNNSSSSSQSTGYSENGKGCSTGKGGSGGGGGGGGGGGGGGGIGSGAGRSLYHPSQHHHPLHHHHHHHHPHLHHLHQLPHGVGDTRTSGGHIVDEDDDGSPSSVLVVETHDLSTTGSKDKHYQQHHHQSQQQQHHHPHHPHHQPSQQHPLGSKMASLGMGVGINGSVMGVPMGYLDFAPEPPAPTATPVTEHVDINCAPSSHDTRDLSSKYSVPNDGDLRVKFETLRSLDPPNAVQLDNHAVSHQQQLHHQQQQAQQQQALLQQQHLLQQQQQQQQQQQQQRQTPQPTGAQQQQNDHQRHSPPHMQQQQQQQQQHVMLMDQQQQHHPTTHSPASSVSSSSSSQHPENLVTGSGAAGSVTPGPPTNNINGNGGGPPAGGADEMKPRLNLKQENLSDGGGDQQHQTMEVEQDQSSMHGMVVTPEISGIMNQSQMSDMYQSDASEDSKVGILDGSSIQYTNLTSPNEAKTPTGPKTWTAEDMESALEALRSHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPSKTWNEDSLNSALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWSAEDLDRALEAIRAGQTSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMMEALESVKQGHMSINQAAIHYNLPYSSLYGRFKRGKYDTPSSGGGGGGGGSSSNAAAAAAATGGGGGAGSGGSNGGANATSAGTGGSNVGGSPQMEFKIEPQHNDHSPENTQHYNPALSASSTPTSNTPTQQQQQQQQQQQQQQQQQQQQQQQQQLTHHLVQQSSSVLPVSIHIVDAAHHHLSHPHQQLHHQQQQQLTQPQHVVVAQHQQQQQHHHLHHQPQLIQHHIIPQQHHIIYQQPLQPIQQQPQYHPMYHIIKQENDRS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00108305;
- 90% Identity
- iTF_00101769;
- 80% Identity
- iTF_00101769;