Basic Information

Insect: Anopheles fontenillei
Gene Symbol: -
Assembly: GCA_008817895.1
Location: VTWG01012311.1:40582-43067[-]

Transcription Factor Domain

TF Family: zf-GAGA
Domain: zf-GAGA domain
PFAM: PF09237
TF Group: Zinc-Coordinating Group
Description: Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 2.9 1.1e+04 -3.6 0.5 19 34 110 124 101 135 0.52

2 11 1.3 4.9e+03 -2.5 0.1 27 46 176 195 173 201 0.84

3 11 0.34 1.2e+03 -0.6 0.0 26 32 335 341 329 352 0.74

4 11 0.3 1.1e+03 -0.4 0.0 26 48 399 421 394 426 0.82

5 11 0.0031 11 5.9 0.0 21 46 422 447 417 453 0.85

6 11 0.00014 0.5 10.3 0.0 21 45 450 474 446 481 0.87

7 11 0.0037 14 5.7 0.1 21 45 478 502 474 507 0.89

8 11 0.11 4.2e+02 0.9 0.0 21 48 530 557 526 562 0.83

9 11 0.00015 0.53 10.2 0.1 21 52 559 590 549 591 0.82

10 11 0.035 1.3e+02 2.5 0.1 22 44 616 638 612 642 0.88

11 11 0.0012 4.3 7.3 0.2 21 51 643 673 638 676 0.86

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	2.9	1.1e+04	-3.6	0.5	19	34	110	124	101	135	0.52
2	11	1.3	4.9e+03	-2.5	0.1	27	46	176	195	173	201	0.84
3	11	0.34	1.2e+03	-0.6	0.0	26	32	335	341	329	352	0.74
4	11	0.3	1.1e+03	-0.4	0.0	26	48	399	421	394	426	0.82
5	11	0.0031	11	5.9	0.0	21	46	422	447	417	453	0.85
6	11	0.00014	0.5	10.3	0.0	21	45	450	474	446	481	0.87
7	11	0.0037	14	5.7	0.1	21	45	478	502	474	507	0.89
8	11	0.11	4.2e+02	0.9	0.0	21	48	530	557	526	562	0.83
9	11	0.00015	0.53	10.2	0.1	21	52	559	590	549	591	0.82
10	11	0.035	1.3e+02	2.5	0.1	22	44	616	638	612	642	0.88
11	11	0.0012	4.3	7.3	0.2	21	51	643	673	638	676	0.86

Sequence Information

Coding Sequence: ATGCTGGGCAAGTATGGCGAGGCGAGTTCCGGCTCGATGAAAAACCTGGAAAATGGACTGCGGGACCGCGTGCTCTACCATCAGAATATGCTGAGCATGAACCTGACGACCGAATTTTACCACACTCCATTCCTTACGGCCGGCAGTGGTAGCAACGTGGAAACAGCTGCAATCGTAGTAGGCGCTCCCGCGCTGGCACAGTCGCAAAAGATGCTCAACAGTATCGCATCCCCCTCTGGATTagcctcctcttcctcctcttccagCACCTCGCAACAGCACGCCACTAATGGGGTAGCGCCGTCACAGCCAGTCCCAAACAGTGTGTCCGCAGCGCAGCAGTATCAGTGTCAACTCTGCCAGAAGTGTTTCATCTCGAGCGCGTTACTGGTGCAGCATATGAAAACGCACGACAATAATGGCAAAACTAGTCCGCCAGTGGCAACGCAGCACATCATCAAGAGCGAGTACATCGGTGGAACCGTAACGAACCAGTATGCGTACGGTATGGCCAAGCAGTTCGAGTGTCACATCTGCCACAAGTCCTTCATGACGATGGTGAACCTGAACCTGCACATGAAGATACACGAAAGTGCAATAAAGCCGCTCGCAGCGACTCACATGTACGCGGGCCAGGCAGGCCTTGCCGGCAACTTGATTGCCGGATCGACCGCGGGCTACCATCACGGCGGGCAGCATCACAGTCAGCTGTCGCAGCATCTCGCGGTTCAAAGCGCCAGCGGCAGTGCCGACGGGCTGTGCCAGATATGCCACAAAACGTTCAGCACGGCGGACCAGTTCGCGGCTCACATGAAGATCCACGAGAATGAGTTTAAAAATCGTGCGCTTTATCATTCCGGTAGTGCGAACGATGGTGGCGAGGGAGCGCCAGCACCCACCAGTAATGGGGCTGGTGTCGGAGACCATTTCTACACCGCGTCCCAGCCGCCACACCACCATCTGGGTCATGCACCGCCGCATCTCGATGCTAGCAAGGGCCATCGCTGCCCAATCTGTCACAAAATGTCCAACAACATCATCGAGCACATTAAACAGCACGAGGGTCAGCTGCAGGGCACGTCCGATGGGTCGGGTGCGGGGTATCATCCTACGAACGATGATTCCCAATCGTCGCTGGAAGAAGACagcgacggtggtggtggcgctggCGGGGACGAGAGCCTGCGAAAGCACGAGTGCTTGATATGCCACAAAAAGTTCTCCAGCTCGGGCAACCTGGCGATACACATACGGGTGCATTCGGGCGAAAAGCCGTTCCGGTGCAGCGTGTGCGGCAAGGGCTTCATCCAGTCGAACAATCTGGCGACGCACATGAAGACGCACACGGGCGAAAAGCCGTACGCGTGCACCATCTGCGGCAAGAACTTTAGCCAGTCGAACAACCTGAAGACGCACATCCGGACGCACACGGGCGAAAAGCCGTACGCGTGTACGATCTGCGGCAAGCGCTTCAACCAGAAGAACAACCTGACCACGCACATGCGCACGCACCAGCTGGTGTGCATGGTGTGCGGGGTGCAGTTCATGCACCCGATCGATCTGGCCACCCACATGAAGTTCCACAACGACGAAAAACCCTACATCTGCTCGGTGTGCAACAAGGTCTACCTGAACCTGGACGAGCTGACCGAGCACATGAAGAAGACGCACAACCAGGTAAAGCCGTACCGGTGCCACATCTGCGACAAAACCTTTACCCAATCGAACAACCTGAAGACCCACATCAAGACGCACATCTTTCAGGATCCGTACAAGTGTCAGGTGTGTTCGCGCTCCTTCCAGAAGGAGGATGACTTCTCGCAGCACATGCTGGTCCACACGGCCGACAAGCCGTACGAGTGTACATACTGCGGCAAGCGGTTCATCCAGTCGAACAACCTGAAAACGCACGTGCGCACGCACACGGGCGAAAAGCCGTACCGGTGCACGATCTGCGCGAAGCACTTTAACCAGAAGAACAATCTCAACACGCACATGCGCATCCACACGGGGGAGAAACCGTTCGAGTGTACCATCTGCGACAAGCGCTTTAATCACTTAAGACGGTTTTGCACTGTGTTTAAATCATACATCACCGCTCCTCCCGTCCGTGTGACTCATTCTCTCTGGAGGGCGGGCATTATGTCTGTATGTAAGGCGCAACGGTTGTGCCAATAG
Protein Sequence: MLGKYGEASSGSMKNLENGLRDRVLYHQNMLSMNLTTEFYHTPFLTAGSGSNVETAAIVVGAPALAQSQKMLNSIASPSGLASSSSSSSTSQQHATNGVAPSQPVPNSVSAAQQYQCQLCQKCFISSALLVQHMKTHDNNGKTSPPVATQHIIKSEYIGGTVTNQYAYGMAKQFECHICHKSFMTMVNLNLHMKIHESAIKPLAATHMYAGQAGLAGNLIAGSTAGYHHGGQHHSQLSQHLAVQSASGSADGLCQICHKTFSTADQFAAHMKIHENEFKNRALYHSGSANDGGEGAPAPTSNGAGVGDHFYTASQPPHHHLGHAPPHLDASKGHRCPICHKMSNNIIEHIKQHEGQLQGTSDGSGAGYHPTNDDSQSSLEEDSDGGGGAGGDESLRKHECLICHKKFSSSGNLAIHIRVHSGEKPFRCSVCGKGFIQSNNLATHMKTHTGEKPYACTICGKNFSQSNNLKTHIRTHTGEKPYACTICGKRFNQKNNLTTHMRTHQLVCMVCGVQFMHPIDLATHMKFHNDEKPYICSVCNKVYLNLDELTEHMKKTHNQVKPYRCHICDKTFTQSNNLKTHIKTHIFQDPYKCQVCSRSFQKEDDFSQHMLVHTADKPYECTYCGKRFIQSNNLKTHVRTHTGEKPYRCTICAKHFNQKNNLNTHMRIHTGEKPFECTICDKRFNHLRRFCTVFKSYITAPPVRVTHSLWRAGIMSVCKAQRLCQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00101095; iTF_00107119; iTF_00104825; iTF_00104528; iTF_00093596; iTF_00093863; iTF_00102751; iTF_00102498;
90% Identity: iTF_00104825;
80% Identity: iTF_00101095;