Aara004827.1
Basic Information
- Insect
- Anopheles arabiensis
- Gene Symbol
- ZFY
- Assembly
- GCA_016920715.1
- Location
- NC:38553723-38556942[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 3.7 1.8e+02 2.4 2.1 1 14 48 61 48 64 0.83 2 13 9.3e-05 0.0045 16.9 1.1 2 23 346 367 345 367 0.97 3 13 7.3e-05 0.0035 17.2 0.8 2 23 374 394 373 394 0.97 4 13 0.09 4.3 7.5 0.7 1 23 404 426 404 426 0.94 5 13 1.9 92 3.3 0.1 3 23 451 478 449 478 0.78 6 13 9 4.3e+02 1.2 1.1 2 20 485 503 484 506 0.64 7 13 5.1e-07 2.4e-05 24.0 2.7 1 23 544 567 544 567 0.96 8 13 0.0025 0.12 12.4 1.1 2 23 573 594 572 594 0.95 9 13 2.1e-05 0.001 18.9 2.2 1 23 599 621 599 621 0.94 10 13 0.0056 0.27 11.3 0.1 2 23 630 652 629 652 0.97 11 13 0.00031 0.015 15.2 0.5 2 20 659 677 658 679 0.93 12 13 4.6e-05 0.0022 17.8 0.4 1 23 690 712 690 712 0.99 13 13 0.00049 0.024 14.6 2.6 1 23 718 741 718 741 0.98
Sequence Information
- Coding Sequence
- ATGGAACAGTTTGTAAATTGCGTACTGTGCTTGACTACCGAGCCGCAAAGCTTTCTCAAGGTGTACAATGAGGAGAAACAGGATACAGACATCGCGTCCGTAATAACAAAACATCTTTGGGTGAAACCGGCCAAGGATTCGTACGTATGTGATGAGTGCTGGAAATGTTTGAACGATTTCCACGAGTTCTACATCAAGCTCGAGAACATACACTATCCGCCCgatccggaggatgcgtcATGCAATGCCAAAGACATCCGCCAGTACCTTTTCGAATTTCATCCCGTGGAAGACGTGAAGATCGAGGAACTGTCTCAGAATGCGGAGGACATGGAAGAAATAGAGTACGAGTATTTGGAAGCATGTAACGAAGAAACCATAGAGAATGAGAACGCCGAACGTTCCAGCGGTCGTCCGAAACGAGCCAGTGCCGCACAGGCGAACTATAAAATTGAAGCGGCCGAATCGGAGTGGGAAAAGGATTACCTTGCGACCAACGAGGACgagtacgacgacgacgacgacgaagcggACGCCGATTACAATGGCGATGAGAAGGAAGAGGTTGACTATCTGGAAGAGGATAATGATGACAGTGAGGTCATTAACTACGATAGTCCCTCGAAGGCAAAGCAAGAGCCGGGCACCAAAAAGGAGCCAGCCAGCGAACCGACGTCACCACCGAAAAGGGGTAGAGGTAGGCCGCCGAAGGCAAAAGCCGAGGTCGAAATCAAACCGGAACCGAAATCCAAGCTGCGCCGTCGGGGTCGTAAAAGAAAGGTTTCAGTTAGCAGCAGCGACTCGGAGCTGGAATCCGACTTTGACGATTTTATTGACGGCGAAGACTGGAAGAAGTATCGCAACACGTCGAATGATAAGGGGAGAAGATCGCTCGGTTTTCGGCAGCTGCAGGAAAAGATATTTTCATACGTGGATGAATTTATCTGCTACTACTGTCCGGAAAAAATCGTCTTCGAGCGGTTTCACCATGCGAATTTGCATTACAAGAAGGTACACAATGAGCCAGCCTTTCTACGGTGTCCAAAGTGTGGCAAAAAGTGCTTCACACCGGGCGGATTTGTGAGCCACATGGAAACGCATGAAGATCCGGAGCGGAACAAGTGTAAAATCTGCGGCAAGGTTACGGATCAAATCACGCTCAAGAAGCACATGCGAGCGCACCAGGAGAACCTGGAGAAGGACTTTCCGTACCCGTGCAGCCTGTGCAATCGGCGgttcgaggaggaggagaagcgcGACAAACACGAACGGCTGCACGGACGGAAAGTGATCATCAAGAAGGAGAAGGGTCGCGATCTGGAGCTGCTTGAGTTCTACAAACGCATCTACTGTGAAGTGTGTGAAGAGAAAAAGCCCGAATCAACCTCGTTCGATAACTTCTGGGATCTGAAGGTGCACATGGGTAATGAGCACAACAAAACGCCATTCCTAAAGTGTCCAATCTGCTTCAAGAAGAATGTGTGCCGCCAGCAGCTAATGGTGCACGTGGATGTACATAATAATCCAGAAAACTATCGctGTGAGGTGTGTAAGGAAATCCATCAGAATCTTGAAAAGCACATGATAAAAGCACACACCCCGGAAACGTCGTTACCGGACGAGAAAAATTACAGCTGCGAACATTGCGGAAAGATGTTCAAATATCAAACGAATCTTAAAAGTCATATCGATCGTATCCACGGTGTAAAGGATGTATCCTGTGACATTTGCCACAAATATTTCAATAGCAAAGCATTGAGCGCTCACAAACGTTCAGCCCACACGGACGAGATGTTTATGTGCGAACATTGTCCGAAAATGTTCAAAACGCGCAGCGGTCTCGAATCCCACAAGAGTGACCACGACGAAACGTTGCGCAAATCGGTGCAGTGTCTCATCTGTGGCAAGGAGATGCGCCGCGGTGCCAGCATGGCGAAGCACATGAAAACGATCCACTCGCAGGAGGATCCGGTCAGCTGTGATCTATGCGGCAAGGTGTTCCGCACCACGTTCCACATGATGCGGCACCGCGCCAACACGTGCTCGGCCACGATCGACTCACGGCCGTACAAGTGCGAAGTGTGCGGCAAAGGCTTTGCCATGAAGCTCACGATGACCGAGCATATGACAACGCACACGCGCACAAGCCTGTATCAGTGCGCGTTCTGCTTCAAGACCTTCGGGTACATTTCGAATCTGTACAAACACCGAAAGAAGGCTCACCCGCTCGAATGGCAGGAGGTGCAGGCACGGCCTGAACAGGGAATCGCCACCGTAATCGAAATACGCAATTAG
- Protein Sequence
- MEQFVNCVLCLTTEPQSFLKVYNEEKQDTDIASVITKHLWVKPAKDSYVCDECWKCLNDFHEFYIKLENIHYPPDPEDASCNAKDIRQYLFEFHPVEDVKIEELSQNAEDMEEIEYEYLEACNEETIENENAERSSGRPKRASAAQANYKIEAAESEWEKDYLATNEDEYDDDDDEADADYNGDEKEEVDYLEEDNDDSEVINYDSPSKAKQEPGTKKEPASEPTSPPKRGRGRPPKAKAEVEIKPEPKSKLRRRGRKRKVSVSSSDSELESDFDDFIDGEDWKKYRNTSNDKGRRSLGFRQLQEKIFSYVDEFICYYCPEKIVFERFHHANLHYKKVHNEPAFLRCPKCGKKCFTPGGFVSHMETHEDPERNKCKICGKVTDQITLKKHMRAHQENLEKDFPYPCSLCNRRFEEEEKRDKHERLHGRKVIIKKEKGRDLELLEFYKRIYCEVCEEKKPESTSFDNFWDLKVHMGNEHNKTPFLKCPICFKKNVCRQQLMVHVDVHNNPENYRCEVCKEIHQNLEKHMIKAHTPETSLPDEKNYSCEHCGKMFKYQTNLKSHIDRIHGVKDVSCDICHKYFNSKALSAHKRSAHTDEMFMCEHCPKMFKTRSGLESHKSDHDETLRKSVQCLICGKEMRRGASMAKHMKTIHSQEDPVSCDLCGKVFRTTFHMMRHRANTCSATIDSRPYKCEVCGKGFAMKLTMTEHMTTHTRTSLYQCAFCFKTFGYISNLYKHRKKAHPLEWQEVQARPEQGIATVIEIRN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00093658; iTF_00101154; iTF_00107172; iTF_00104585; iTF_00095820; iTF_00102546; iTF_00108615; iTF_00105321; iTF_00101871; iTF_00099827;
- 90% Identity
- iTF_00107172; iTF_00093658; iTF_00101154; iTF_00104585; iTF_00102546;
- 80% Identity
- -