Acol005857.1
Basic Information
- Insect
- Anopheles coluzzii
- Gene Symbol
- ZFY
- Assembly
- GCA_016097175.1
- Location
- CM027928.1:41184477-41187241[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 2.8 1.4e+02 2.9 2.0 1 15 48 62 48 65 0.83 2 13 8.3e-05 0.0044 17.1 1.1 2 23 238 259 237 259 0.97 3 13 9.4e-06 0.00049 20.1 0.6 2 23 266 287 265 287 0.97 4 13 0.015 0.78 10.0 0.6 1 23 297 319 297 319 0.97 5 13 1.7 90 3.5 0.1 3 23 344 371 342 371 0.78 6 13 8.1 4.2e+02 1.4 1.1 2 20 378 396 377 399 0.64 7 13 4.5e-07 2.3e-05 24.2 2.7 1 23 437 460 437 460 0.96 8 13 0.0023 0.12 12.6 1.1 2 23 466 487 465 487 0.95 9 13 1.9e-05 0.00097 19.1 2.2 1 23 492 514 492 514 0.94 10 13 0.005 0.26 11.5 0.1 2 23 523 545 522 545 0.97 11 13 0.00028 0.014 15.5 0.5 2 20 552 570 551 572 0.93 12 13 4.1e-05 0.0022 18.0 0.4 1 23 583 605 583 605 0.99 13 13 0.00044 0.023 14.8 2.6 1 23 611 634 611 634 0.98
Sequence Information
- Coding Sequence
- ATGGAACAGTTTGTAAATTGCGTACTGTGCTTGACTACCGAGCCGCAAAGCTTTCTCAAGGTGTTCAATGAAGAGAAACAGGATACAGACATCGCGTCCGTAATAACAAAACATCTTTGGGTGAAACCGGCCAAGGATTCGTACGTATGTGATGAGTGCTGGAAATGTTTAAACGATTTCCACGAGTTCTACACCAAGCTCGAGAACATACACTATCCGCCCGATCCGGAGGATGCGTCATGCAATGCCAAAGACATCCGACAGTACCTTTTCGAATTTCATCCCGTGGAAGACGTGAAGATCGAGGAACTGTCCCAGAATGCGGAGGACATGGAAGAAATAGAGTACGAGTATTTGGAAGCATGGGTAGAGGTAGGCCTCCGAAGGCAAAAGCCCGAGATCGAAATCAAACCGGAACCGAAATCAAAGCTGCGCCGCCGGGGTCGTAAAAGAAAGGTTTCGGTTAGCAGCAGCGACTCGGAGCTGGAATCCGACTTTGACGATTTTATTGACGGCGAAGACTGGAAGAAGTATCGCAACACGTCGAAGGATAAGGGGAGAAGATCGCTCGGTTTTCGGCAGCTGCAGGAAAAGATATTTTCATACGTGGATGAATTTATCTGCTACTACTGTCCGGAAAAAATCGTCTTCGAACGGTTTCACCATGCGAATTTGCATTACAAGAAGGTACACAATGAGCCAGCCTTTCTGCGGTGTCCAAAGTGTGGCAAAAAGTGCTTCACACCGGGCGGATTTGTGAGCCACATGGAAACGCACGAAGATCCGGAGCGGAACAAGTGTAAAATCTGCGGCAAGGTTACGGATCAGGAAATCACGCTCAAGAAGCACATGCGAGCGCACCAGGAGAACCTGGAGAAGGACTTTCCGTACCCGTGCAGCCTGTGCAATCGGCGGTTCGAGGAGGAGGAGAAGCGAGAGAAACACGAACGGCTGCACGGACGGAAAGTGATCATCAAGAAGGAGAAGGGTCGCGATCTGGAGCTGCTTGAGTTCTACAAACGCATCTACTGTGAAGTGTGTGAAGAGAAAAAGCCCGAATCAACCTCGTTCGATAACTTCTGGGATCTGAAGGTGCACATGGGTAATGAGCACAACAAAACGCCATTCCTAAAGTGTCCAATCTGCTTCAAGAAGAATGTGTGCCGCCAGCAGCTAATGGTGCACGTGGATGTACATAATAATCCAGAAAACTATCGCTGTGAGGTGTGTAAGGAAATCCATCAGAATCTTGAAAAGCACATGATAAAAGCACACACCCCGGAAACGTCGTTACCGGACGAGAAAAATTACAGCTGCGAACATTGCGGAAAGATGTTCAAATATCAAACGAATCTTAAAAGTCATATCGATCGTGTCCACGGTGTAAAGGATGTATCCTGTGACATCTGCCACAAATATTTCAATAGCAAAGCATTGAGCGCTCACAAACGTTCAGCCCACACGGACGAGATGTTTATGTGCGAACATTGTCCGAAAATGTTCAAAACGCGCAGCGGTCTCGAATCCCACAAGAGTGACCACGACGAAACGTTGCGCAAATCGGTCCAGTGTCTCATCTGTGGCAAGGAGATGCGCCGCGGTGCCAGCATGGCGAAGCACATGAAAACGATCCACTCGCAGGAGGATCCGGTCAGCTGTGATCTATGCGGCAAGGTGTTCCGCACCACGTTCCACATGATGCGGCACCGCGCCAACACGTGCTCGGCCACGATCGACTCACGGCCGTACAAGTGCGAAGTGTGCGGCAAAGGCTTTGCCATGAAGCTCACGATGACCGAGCATATGACAACGCACACGCGCACAAGCCTGTATCAGTGCGCGTTCTGCTTCAAGACCTTCGGGTACATTTCGAATCTGTACAAACACCGGAAGAAGGCTCATCCGCTCGAATGGCAGGAGGTGCAGGCACGGCCTGAACAGGGAATCGCCACCGTAATCGAAATACGCAATTAG
- Protein Sequence
- MEQFVNCVLCLTTEPQSFLKVFNEEKQDTDIASVITKHLWVKPAKDSYVCDECWKCLNDFHEFYTKLENIHYPPDPEDASCNAKDIRQYLFEFHPVEDVKIEELSQNAEDMEEIEYEYLEAWVEVGLRRQKPEIEIKPEPKSKLRRRGRKRKVSVSSSDSELESDFDDFIDGEDWKKYRNTSKDKGRRSLGFRQLQEKIFSYVDEFICYYCPEKIVFERFHHANLHYKKVHNEPAFLRCPKCGKKCFTPGGFVSHMETHEDPERNKCKICGKVTDQEITLKKHMRAHQENLEKDFPYPCSLCNRRFEEEEKREKHERLHGRKVIIKKEKGRDLELLEFYKRIYCEVCEEKKPESTSFDNFWDLKVHMGNEHNKTPFLKCPICFKKNVCRQQLMVHVDVHNNPENYRCEVCKEIHQNLEKHMIKAHTPETSLPDEKNYSCEHCGKMFKYQTNLKSHIDRVHGVKDVSCDICHKYFNSKALSAHKRSAHTDEMFMCEHCPKMFKTRSGLESHKSDHDETLRKSVQCLICGKEMRRGASMAKHMKTIHSQEDPVSCDLCGKVFRTTFHMMRHRANTCSATIDSRPYKCEVCGKGFAMKLTMTEHMTTHTRTSLYQCAFCFKTFGYISNLYKHRKKAHPLEWQEVQARPEQGIATVIEIRN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00093670;
- 90% Identity
- -
- 80% Identity
- -