Basic Information

Gene Symbol
ZFY
Assembly
GCF_000005575.2
Location
NT:39539755-39542531[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 3 1.5e+02 2.6 2.0 1 15 48 62 48 65 0.83
2 13 9e-05 0.0046 16.9 1.1 2 23 349 370 348 370 0.97
3 13 1e-05 0.00052 19.8 0.6 2 23 377 398 376 398 0.97
4 13 0.016 0.83 9.8 0.6 1 23 408 430 408 430 0.97
5 13 1.9 94 3.3 0.1 3 23 455 482 453 482 0.78
6 13 8.7 4.4e+02 1.2 1.1 2 20 489 507 488 510 0.64
7 13 4.9e-07 2.5e-05 24.0 2.7 1 23 548 571 548 571 0.96
8 13 0.0024 0.12 12.3 1.1 2 23 577 598 576 598 0.95
9 13 2e-05 0.001 18.9 2.2 1 23 603 625 603 625 0.94
10 13 0.0055 0.28 11.2 0.1 2 23 634 656 633 656 0.97
11 13 0.0003 0.015 15.2 0.5 2 20 663 681 662 683 0.93
12 13 4.5e-05 0.0023 17.8 0.4 1 23 694 716 694 716 0.99
13 13 0.00048 0.024 14.6 2.6 1 23 722 745 722 745 0.98

Sequence Information

Coding Sequence
ATGGAACAGTTTGTAAATTGCGTACTGTGCTTGACTACCGAGCCGCAAAGCTTTCTCAAGGTGTACAATGAAGAGAAACAGGATACAGACATCGCGTCCGTAATAACAAAACATCTTTGGGTGAAACCGGCCAAGGATTCGTACGTATGTGATGAGTGCTGGAAATGTTTAAACGATTTCCACGAGTTCTACACCAAGCTCGAGAACATACACTATCCGCCCgatccggaggatgcgtcatGCAATGCCAAAGACATCCGACAGTACCTTTTCGAATTTCATCCCGTGGAAGACGTGAAGATCGAGGAACTGTCTCAGAATGCGGAGGACATGGAAGAAATAGAGTACGAGTATTTGGAAGCATGTAACGAAGAAACCATAGAGAATGAGAACGCCGAACGTTCCAGCGGTCGTCCGAAACGAGCCAGTGCCGCACAGGCGAACTATAAAATTGAAGCGGCCGAATCGGAGTGGGAAAAGGATTACCTTGCGACCAACGAGGACGagtacgacgacgacgacgacgacgacgacgaagcgGACGCCGATTACAATGGCGATGAGAAGGAAGAGGTTGACTATCTGGAAGAGGATAATGATGACAGTGAGGTCATTAACTACGATAGTCCCTCGAAGGCAAAGCAAGAGCCGGGCACCAAAAAGGAGCCAGCCAGCGAACCGACGTCACCACCGAAAAGGGGTAGAGGTAGGCCTCCGAAGGCAAAACCCGAGATCGAAATCAAACCGGAACCGAAATCAAAGCTGCGCCGCCGGGGTCGTAAAAGAAAGGTTTCGGTTAGCAGCAGCGACTCGGAGCTGGAATCCGACTTTGACGATTTTATTGACGGCGAAGACTGGAAGAAGTATCGCAACACGTCGAAGGATAAGGGGAGAAGGTCGCTCGGTTTTCGGCAGCTGCAGGAAAAGATATTTTCATACGTGGATGAATTTATCTGCTACTACTGTCCGGAAAAAATCGTCTTCGAACGGTTTCACCATGCGAATTTGCATTACAAGAAGGTACATAATGAGCCAGCCTTTCTGCGGTGTCCAAAGTGTGGCAAAAAGTGCTTCACACCGGGCGGATTTGTGAGCCACATGGAAACGCACGAAGATCCGGAGCGGAACAAGTGTAAAATCTGCGGCAAGGTTACGGATCAGGAAATCACGCTCAAGAAGCACATGCGAGCGCACCAGGAGAACCTGGAGAAGGACTTTCCGTACCCGTGCAGCCTGTGCAATCGGCGgttcgaggaggaggagaagcgAGAGAAACACGAACGGCTGCACGGACGGAAATTGATCATCAAGAAGGAGAAGGGTCGCGATCTGGAGCTGCTTGAGTTCTACAAACGCATCTACTGTGAAGTGTGTGAAGAGAAAAAGCCCGAATCAACCTCGTTCGATAACTTCTGGGATCTGAAGGTGCACATGGGTAATGAGCACAACAAAACGCCATTCCTAAAGTGTCCAATCTGCTTCAAGAAGAATGTGTGCCGCCAGCAGCTAATGGTGCACGTGGATGTACATAATAATCCAGAAAACTATCGcTGTGAGGTGTGTAAGGAAATCCATCAGAATCTTGAAAAGCACATGATAAAAGCACACACCCCGGAAACGTCGTTACCGGACGAGAAAAATTACAGCTGCGAACATTGCGGAAAGATGTTCAAATATCAAACGAATCTTAAAAGTCATATCGATCGTGTCCACGGTGTAAAGGATGTATCCTGTGACATCTGCCACAAATATTTCAATAGCAAAGCATTGAGCGCTCACAAACGTTCAGCCCACACGGACGAGATGTTTATGTGCGAACATTGTCCGAAAATGTTCAAAACGCGCAGCGGTCTCGAATCCCACAAGAGTGACCACGACGAAACGTTACGCAAATCGGTGCAGTGTCTCATCTGTGGCAAGGAGATGCGCCGCGGTGCCAGCATGGCGAAGCACATGAAAACGATCCACTCGCAGGAGGATCCGGTCAGCTGTGATCTATGCGGCAAGGTGTTCCGCACCACGTTCCACATGATGCGGCACCGCGCCAACACGTGCTCGGCCACGATCGACTCACGGCCGTACAAGTGCGAAGTGTGCGGCAAAGGCTTTGCCATGAAGCTCACGATGACCGAGCATATGACAACGCACACGCGCACAAGCCTGTATCAGTGCGCGTTCTGCTTCAAGACCTTCGGGTACATTTCGAATCTGTACAAACACCGAAAGAAGGCTCATCCGCTCGAATGGCAGGAGGTGCAGGCACGGCCTGAACAGGGAATTGCCACCGTAATCGAAATACGCAATTAG
Protein Sequence
MEQFVNCVLCLTTEPQSFLKVYNEEKQDTDIASVITKHLWVKPAKDSYVCDECWKCLNDFHEFYTKLENIHYPPDPEDASCNAKDIRQYLFEFHPVEDVKIEELSQNAEDMEEIEYEYLEACNEETIENENAERSSGRPKRASAAQANYKIEAAESEWEKDYLATNEDEYDDDDDDDDEADADYNGDEKEEVDYLEEDNDDSEVINYDSPSKAKQEPGTKKEPASEPTSPPKRGRGRPPKAKPEIEIKPEPKSKLRRRGRKRKVSVSSSDSELESDFDDFIDGEDWKKYRNTSKDKGRRSLGFRQLQEKIFSYVDEFICYYCPEKIVFERFHHANLHYKKVHNEPAFLRCPKCGKKCFTPGGFVSHMETHEDPERNKCKICGKVTDQEITLKKHMRAHQENLEKDFPYPCSLCNRRFEEEEKREKHERLHGRKLIIKKEKGRDLELLEFYKRIYCEVCEEKKPESTSFDNFWDLKVHMGNEHNKTPFLKCPICFKKNVCRQQLMVHVDVHNNPENYRCEVCKEIHQNLEKHMIKAHTPETSLPDEKNYSCEHCGKMFKYQTNLKSHIDRVHGVKDVSCDICHKYFNSKALSAHKRSAHTDEMFMCEHCPKMFKTRSGLESHKSDHDETLRKSVQCLICGKEMRRGASMAKHMKTIHSQEDPVSCDLCGKVFRTTFHMMRHRANTCSATIDSRPYKCEVCGKGFAMKLTMTEHMTTHTRTSLYQCAFCFKTFGYISNLYKHRKKAHPLEWQEVQARPEQGIATVIEIRN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00093670;
90% Identity
iTF_00093670;
80% Identity
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