Amel005366.1
Basic Information
- Insect
- Anopheles melas
- Gene Symbol
- ZFY
- Assembly
- GCA_000473525.2
- Location
- AXCO02002227.1:12845-15616[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 3.2 1.7e+02 2.7 2.0 1 15 48 62 48 65 0.83 2 13 9.8e-05 0.0053 17.0 1.1 2 23 297 318 296 318 0.97 3 13 1.1e-05 0.0006 19.9 0.6 2 23 325 346 324 346 0.97 4 13 0.095 5.1 7.6 0.7 1 23 356 378 356 378 0.94 5 13 2 1.1e+02 3.4 0.1 3 23 403 430 401 430 0.78 6 13 9.5 5.1e+02 1.3 1.1 2 20 437 455 436 458 0.64 7 13 5.3e-07 2.9e-05 24.1 2.7 1 23 496 519 496 519 0.96 8 13 0.0027 0.14 12.5 1.1 2 23 525 546 524 546 0.95 9 13 2.2e-05 0.0012 19.0 2.2 1 23 551 573 551 573 0.94 10 13 0.0059 0.32 11.4 0.1 2 23 582 604 581 604 0.97 11 13 0.00033 0.018 15.3 0.5 2 20 611 629 610 631 0.93 12 13 4.9e-05 0.0026 17.9 0.4 1 23 642 664 642 664 0.99 13 13 0.00052 0.028 14.7 2.6 1 23 670 693 670 693 0.98
Sequence Information
- Coding Sequence
- ATGGAACAGTTTGTAAATTGCGTACTGTGCTTGACTACCGAGCCGCAAAGCTTTCTCAAGGTGTACAATGAAGAGAAACAGGATACAGACATCGCGTCCGTAATAACAAAACATCTTTGGGTGAAACCGGCCAAGGATTCGTACGTATGTGATGAGTGCTGGAAATGTTTGAACGATTTCCACGAGTTCTACACCAAGCTCGAGAACATACACTATCCGCCCGATCCGGAGGATGCGTCATGCAATGCCAAAGACATCCGACAGTACCTTTTCGAATTTCATCCCGTGGAAGACGTGAAGATCGAGGAATTGTCTCAGAATGCGGAGGACATGGAAGAAATAGAGTACGAGTATTTGGAAGCATGCAACGAAGAAACCATAGACAATGAGAACGCCGAACGTTCTAGCGGTCGTCCGAAACGGGCCAGTGCCGCACAGGCTAACTATAAAATTGAAGCGGCCGAATCGGATCCCTCGAAGGCAAAGCAAGAGCCGGGCACCAAAAAGGAGCCAGCCAGCGAACCGACGTCACCACCGAAAAGGGGTAGAGGTAGGCCTCCGAAGGCAAAAGCCGAGGTCGAAATCAAACCCGAACCGAAATCCAAGCTGCGCCGTCGGGGTCGTAAAAGAAAGGTTTCGGTTAGCAGCAGCGACTCGGAGCTGGAATCCGACTTTGACGATTTTATTGACGGCGAAGACTGGAAGAAGTATCGCAACACGTCGAAGGATAAGGGGAGAAGATCGCTCGGTTTTCGGCAGCTGCAGGAAAAGATATTTTCGTACGTGGATGAATTTATCTGCTACTACTGTCCGGAAAAAATCGTCTTCGAACGGTTTCACCATGCGAATTTGCATTACAAGAAGGTACACAATGAGCCAGCCTTTCTGCGGTGTCCAAAGTGTGGCAAAAAGTGCTTCACACCGGGCGGATTTGTGAGCCACATGGAAACGCACGAAGATCCGGAGCGGAACAAGTGTAAAATCTGCGGCAAGGTTACGGATCAGGAAATCACGCTCAAGAAGCACATGCGAGCGCACCAGGAGAACCTGGAGAAGGACTTTCCGTACCCGTGCAGCCTGTGCAATCGGCGGTTCGAGGAGGAGGAGAAGCGCGATAAACACGAACGGCTGCACGGACGGAAAGTGATCATCAAGAAGGAGAAGGGTCGCGATCTGGAGCTGCTTGAGTTCTACAAACGCATCTACTGTGAAGTGTGTGAAGAGAAAAAGCCCGAATCAACCTCGTTCGATAACTTCTGGGATCTGAAAGTGCACATGGGTAATGAGCACAACAAAACGCCATTCCTAAAGTGCCCAATCTGCTTCAAGAAGAATGTGTGCCGCCAGCAGCTAATGGTGCACGTGGATGTACATAGTAATCCAGAAAACTATCGCTGTGAGGTGTGTAAGGAAATCCATCAGAATCTTGAAAAGCACATGATAAAAGCACACACCCCGGAAACGTCGTTACCGGACGAGAAAAATTACAGCTGCGAACATTGCGGAAAGATGTTCAAATATCAAACGAATCTTAAAAGTCATATCGATCGTGTGCACGGTGTAAAGGATGTATCCTGTGACATCTGCCACAAATATTTCAATAGCAAAGCATTGAGCGCTCACAAACGTTCAGCCCACACGGACGAGATGTTTATGTGCGAACATTGTCCGAAGATGTTCAAAACGCGCAGCGGTCTCGAATCCCACAAGAGTGACCACGACGAAACGTTGCGCAAATCTGTGCAGTGTCTCATCTGTGGCAAGGAGATGCGCCGCGGTGCCAGCATGGCGAAGCACATGAAAACGATCCACTCGCAGGAGGATCCGGTCAGCTGTGATCTATGCGGCAAGGTGTTCCGCACCACGTTCCATATGATGCGGCACCGCGCCAACACGTGCTCGGCCACGATCGACTCACGGCCGTACAAGTGCGAAGTGTGCGGCAAAGGCTTTGCCATGAAGCTCACGATGACCGAGCATATGACAACGCACACGCGCACCAGCCTGTATCAGTGCGCGTTCTGCTTCAAGACCTTCGGGTACATTTCGAATCTGTACAAACACCGGAAGAAGGCTCATCCGCTCGAATGGCAGGAGGTGCAGGCACGGCCTGAACAGGGAATCGCCACCGTAATCGAAATACGCAATTAA
- Protein Sequence
- MEQFVNCVLCLTTEPQSFLKVYNEEKQDTDIASVITKHLWVKPAKDSYVCDECWKCLNDFHEFYTKLENIHYPPDPEDASCNAKDIRQYLFEFHPVEDVKIEELSQNAEDMEEIEYEYLEACNEETIDNENAERSSGRPKRASAAQANYKIEAAESDPSKAKQEPGTKKEPASEPTSPPKRGRGRPPKAKAEVEIKPEPKSKLRRRGRKRKVSVSSSDSELESDFDDFIDGEDWKKYRNTSKDKGRRSLGFRQLQEKIFSYVDEFICYYCPEKIVFERFHHANLHYKKVHNEPAFLRCPKCGKKCFTPGGFVSHMETHEDPERNKCKICGKVTDQEITLKKHMRAHQENLEKDFPYPCSLCNRRFEEEEKRDKHERLHGRKVIIKKEKGRDLELLEFYKRIYCEVCEEKKPESTSFDNFWDLKVHMGNEHNKTPFLKCPICFKKNVCRQQLMVHVDVHSNPENYRCEVCKEIHQNLEKHMIKAHTPETSLPDEKNYSCEHCGKMFKYQTNLKSHIDRVHGVKDVSCDICHKYFNSKALSAHKRSAHTDEMFMCEHCPKMFKTRSGLESHKSDHDETLRKSVQCLICGKEMRRGASMAKHMKTIHSQEDPVSCDLCGKVFRTTFHMMRHRANTCSATIDSRPYKCEVCGKGFAMKLTMTEHMTTHTRTSLYQCAFCFKTFGYISNLYKHRKKAHPLEWQEVQARPEQGIATVIEIRN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00093670;
- 90% Identity
- iTF_00093670;
- 80% Identity
- -