Aleu025796.1
Basic Information
- Insect
- Agriopis leucophaearia
- Gene Symbol
- -
- Assembly
- GCA_949125355.1
- Location
- OX421291.1:2656195-2662047[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.5e-08 3.9e-05 23.9 0.2 4 37 62 95 59 103 0.89
Sequence Information
- Coding Sequence
- ATgaccacaatatcgtcgCAAGTGGCCCGTGCCGCGAGAGTGTTGGAACCTGCAGTTGAAAACAACCACGCCGCGGAGCGCAcgcttgtttttataaaattctgGCAGAATAAACGTAACATCATGGAAAACGGATCACCAGCTTCTACCAGAAGGAAAAAAAGGGCTCAATGGACTTCGCAACAGATGGAAAACGCTGTTAAAATGGTAGAAAGGGGTATATTATCTACATATGCTGCTGCAGCCAGATACAACATCCCAAGAAGAACCCTACGCAACCATCTAGCGAGTGGTTCGACTACACGAAAGTTAGGTCGGTCGGCTATATTGACTACAGAACAAGAAGCTGGACTTGTCAAAAGAATCATACGTTTGGCTGATGTTGGAGTGCCGATGACTTCAAAGATGTTGCGCGTACAGGCATTTTCATTCTGCAAAATTAAGAATATTCCAAACACTTTCAATGACGGAAAAAATGCCGCGGGGAAGAAATGGTTGAGGTTATTTCTCAAGCGACACCCTGAACTAGCACGTCGTAAAGCACAGATGATGAATCCAGCTCGTgctcaaaaattaaataaagatattGTTGGCGATCACTTTTCCAAATACAAAAGCGTGCTGGATAAACTTGGAATTGAACATAAACCTGAAAGCATTTACAACATCGACGAAAAAAATTGTCGCATATCTTTGCACCATCAGCAGGAAGTTCTGACAGCCAAAGGGAGAAAGAGAGTTCATCAAATAGCGAATGAGCATGCTGAAAGTGTGACTGTGGTAGGCTGCGGAAATGCTATAGGATCAGCTATTCCGCCAATGATATTGTTCAAAGGCAAGAGACTAAAGCCAGAATTCCAAGATAATTTACCTCCAGGCTCTGTGGTGAAGATGACGCCAAAAGGAAGTATGACGACAGGCACTTTCATAGAGTATATTAATCATTTGCATAAATACAGGACATCAGGGCCATGTCTCCTCGTATTTGATGGTGCAAAATGCCACCTGGACTTTACTATTGTCGAGGAAGCTGAGAAATGTGGCATTACTTTATACTGTCTTCCGTCAAATACCACGCACGAGTTACAGCCCATGGATAAATCGGTTTATCGTTCTTTTGAGCACCATTGGGATCAAGAGTTGATTAAATACGTCAGTCAGCATCCCGAACGAACCCTTAACAAGACAAGCTTCAATGTCATTCTCTCACAAGTATGGCCAAAATGTATGACTATTACCAATATCTCGAATGGGTTTCGCGCTACAGGGTTATATCCATATAACCCAGATGCTATTCCTGAAGAGGCGTTTGCGCCCTCTGCGTTGTCAGAACTTCCAAATCCTACAAACAGTGAGAATATTGCTGTCTTATCTGATGAATCGGGGGAACAAGAGAATTCAACTGCAAATGTGGAAGATTCAGATGGGTCAGGCACAGATACAGAGAATTTGCCACTGTTCTTGCTCTCAAAAAACAATCCGAATGCTGGAACTCCACATAAGATAGACAATCAATCAACCACGTGTGAGATTCATGAATTTTTACCAACTCCTAAGTTTAAAGTTGCAGCGACTGCTCCACGCAAGAAATCTTTGAATTACAGGGCTcaagaggtaacaaaaaatttgtttgGTGACAATGCTACGAATTCCACATCACAGATTACTGTACTATCGGCAAGAGTAGACGATGTTCCTGGTACTTCTTCCATGATAAAGATTAACACAAAGACACCAAAATCAGCGTCAGTTACTGGCTATTCATCTGCACACCCTGCAGTTGCTGCAACGCGAAAGCAAACCTCAGTAAAGACTGCTTCTTTGACAGCAGATAAGCCTACAGGATCTAAACCAAAACGTCACGATAATAAACCTTCTTGGTACTGTCCAGCTTGTGAAGAAGATCGAGTTGATGATATGCGACAATGTCTTACTTGTGGCGTTTGGTATCATGAGTTGTGTGTTGGACTCACACCcgctgataaaatattttactgttcaGGAGATTgttcaaaaaaaattatgaaaagggCTGATTAA
- Protein Sequence
- MTTISSQVARAARVLEPAVENNHAAERTLVFIKFWQNKRNIMENGSPASTRRKKRAQWTSQQMENAVKMVERGILSTYAAAARYNIPRRTLRNHLASGSTTRKLGRSAILTTEQEAGLVKRIIRLADVGVPMTSKMLRVQAFSFCKIKNIPNTFNDGKNAAGKKWLRLFLKRHPELARRKAQMMNPARAQKLNKDIVGDHFSKYKSVLDKLGIEHKPESIYNIDEKNCRISLHHQQEVLTAKGRKRVHQIANEHAESVTVVGCGNAIGSAIPPMILFKGKRLKPEFQDNLPPGSVVKMTPKGSMTTGTFIEYINHLHKYRTSGPCLLVFDGAKCHLDFTIVEEAEKCGITLYCLPSNTTHELQPMDKSVYRSFEHHWDQELIKYVSQHPERTLNKTSFNVILSQVWPKCMTITNISNGFRATGLYPYNPDAIPEEAFAPSALSELPNPTNSENIAVLSDESGEQENSTANVEDSDGSGTDTENLPLFLLSKNNPNAGTPHKIDNQSTTCEIHEFLPTPKFKVAATAPRKKSLNYRAQEVTKNLFGDNATNSTSQITVLSARVDDVPGTSSMIKINTKTPKSASVTGYSSAHPAVAATRKQTSVKTASLTADKPTGSKPKRHDNKPSWYCPACEEDRVDDMRQCLTCGVWYHELCVGLTPADKIFYCSGDCSKKIMKRAD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01220597;
- 90% Identity
- iTF_00032854; iTF_00795651; iTF_00985992; iTF_00985993; iTF_00318807; iTF_00147306; iTF_00049839; iTF_00973711; iTF_00906989; iTF_00076466; iTF_01220597; iTF_01220596; iTF_01220599; iTF_00038678; iTF_00238757; iTF_00695476; iTF_00038681; iTF_00809061; iTF_00809058; iTF_00809059; iTF_00809060; iTF_00809050; iTF_01367813; iTF_00801772; iTF_00238739; iTF_01208121; iTF_01338678; iTF_01335871; iTF_00044441;
- 80% Identity
- -