Aech008746.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Acromyrmex echinatior
Gene Symbol
HIVEP1
Assembly
GCA_000204515.1
Location
NW:5651-37285[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 9 0.0069 0.42 10.5 0.1 1 23 109 131 109 131 0.97
2 9 0.0065 0.39 10.6 2.4 1 21 137 157 137 161 0.86
3 9 0.00069 0.042 13.6 0.0 1 21 371 391 371 392 0.96
4 9 1.2e-06 7.2e-05 22.3 1.6 1 23 1113 1135 1113 1135 0.99
5 9 5.3e-06 0.00032 20.3 5.2 1 23 1141 1165 1141 1165 0.92
6 9 2.7e-06 0.00016 21.2 0.2 2 23 1848 1869 1847 1869 0.97
7 9 9.2e-05 0.0055 16.4 1.9 1 23 1875 1899 1875 1899 0.92
8 9 0.0018 0.11 12.3 3.2 1 23 1920 1944 1920 1944 0.93
9 9 1.5 91 3.1 0.6 1 19 2101 2119 2101 2124 0.92

Sequence Information

Coding Sequence
ATGACGACAGAGACCCATACTGTGGCGATGACAGACCCACAGCTgaccaataataataacaacaataacaacaacaacaacaacgaTGGCGAGCCAAAGTACCTACACAAGAAATTCAAGAAGATGGCGACGACCGAAGTTACGCCGAAAGTCGTCGAGAAGGAGGGCACGGCAAACAACGTCATTTTTGACGAGGCACCAAAACGAAAGGACGACAATAAGGATGGTAAGGAGTCATCGAAGGAACTCGGCAACAAACTCGAACCTTCGCCGGAGCCGACAGGGGGAGTCGAGCCCATCGCTGAGTCTCGAAAGAGCGGCAGCTACGCGTGTCCTTTCTGCCCGATGACGTGGACCAAGCCGAGTGTCCTTCAAAAGCACATCAGGGCGCACACAAACGAACGACCGTATCCATGCGTACCATGCGGAATTTCCTTCAAGACCAAATCAAATCTGTACAAGCATTGTAGGTCGCGCTCTCATGCACACAAGATGGAGAAAGGAGAGAAGGTATCTGAGGATTCCGACATAAGTCTATCGGATAGCGCCAGTAATGGTACTGGTacaccaccgccgccgccagCTTCGACGTCCACAACGGCAACGACGACAGTATCCACTGCTGTAGTAAAGACCGTGAAAACCGGCAAGATCTATAAGCCAAAGTTTCAAGCCCGAACAGCATTACAGTGCGTGAACAGTGACACCGAAACGTCTTCCTTATCGCCCAGTTCTTCTAACAGTTCCTGCTTGTCTTCCTCCACAAATACTTCCACTTCCAATTCTGTTAAACCTAAGGCGGAGCAGCTACAGGAGCATATCGACAAGATTATTACAGACAATCAGGCAATCGTCGATGCAGTGGATCCATGTCTGCACAAACTAATGCATCGCCAACACAGCCTAGTCGAGACAAAACAGTCATTTGAACAGCAGCCGTTAAACTTGTCTTCCGCGGAGGAGATCTTGAACAACAGAAAGCGTTGTTATAGCGATAGTTGTGCTCAGGAAGCGAAAGATGAGCTTCCGGATAGCTCAATCATTAAGGATCTTCTTTTAAAAACTCGCGGTTCTATGAACGGACCAGTACTGGAGACTGCTGTAGAAAATTTTGTCTGTCCCACTTGTAACATCCCCTATACTAGTATAGACAATTTAGAGGCTCACCGCAGATATTACTGTAAAGGTATTGACAATTCTAGAAAAGGAACCGATTATCACGCGGACTTAGAAAAACGAGATTCTGATTTCGATGTAAAATCTGCCGATTATTATAGCACCTTGCAACCGTTACCCTCGCCGGGTCCTCTACTAGGTAACACCAGACTAGTCGACGCGTACGCTCCACCTGCCAAGAAGCAAAGAACGGAAACTGTGCCGACCAGTTTAAGATCGCTAGAGGAGCTCAGCAAGTATCCGCGTCCAAACTCACTACAGATGTTCGGTGGTGAAGTGAGGATTCTCGACAACACGGGCGAAGTAACGAAAACGATGAGGATCGAGCCACGACAGACAAATTCGCCCACGAACGAGCACGTTGTCAATAGCAAGTGCATCAACTCGGAGACGGCATCGATAGTGGTAAAATCGGGACTTCATTCTGGTGGTACCATGATGCATAAACCGCCGGAAATATCGGCTAACACGTCCAATTCCTCCATATCTCTGCCCAACGCACCGAAGATATTGGCGCCCATTATACCAAACATATCAACCCCGAATATAGCGCCTACTATGTCCTGTTATGACTACTTGGAGTCGCACCTCAACCCGCTGACGAGCATCACTGCCTACAATCCGTTGACTTTGCCGCAAGCTGGTATCACAAGTATCCTCCATGGCGGAAAGGTGATACCTTATGTACCTGGTATGCCCGGACCACATACTCTGACTGGTACGCCGACTATAGACATATCTCCGAGTATAACGGCTGGCGAAGCCGGTTATAAAGTGATACCGGGCCTACCGGGCCTACACATGATACCTCAGCCACTCGACCTGGCTAGTTCAGTGAAGGTACAACCCAGTACGGTGCCTGGTATGCCCAGTCCATTGTCTGGACATGTTCCTTCCTTGCTAGACCAGCCTCTGGATTTGGCTAGTCCGGCAAAGGAGTCGATGAAGATCAGGTTCAAGACACCTCATGGCGCTGGCGTNNNCAGTCCCAAAGTTCCTAACGTCAAGGTCGAAACTTCGACAGACAAGTATCGCACGAGGATGCCGTCAACTCTCACCGGTGGAGAGACCGGCAAAGCAGAGCTCGATCgtcatatcaaaaataatacggCCGTAAAATACAGGAGTATAGAGAGTccgcgagagagaaaggattttACATACGACAAGAGTCCAAAGTTGGACAAGACTTTTAGTTATCCAAATGGCGTAGATCCCACAATTTCTTCGAACTCTTACAACAAGATGAGATACTCGCCCAAGACCATTTCGGAAAACAAGAAGAGATCATCGAATTGGGGTGTCAGTGAAGTTGATGCTGGTAGAGCACTCCCAATAGATACGCACACTGCAATCTCTAAGTTAGACTTACCTGTTCACGAGAATGgtcgattaaaaaatagtgTCCCTTCGGATACACGTGGATGGATTAAAGTCGCGGACGGATACGGCGCATTCAATGGCGCTAAGATAAAGGCCGACAACGCGTCATCGGTAATACTTGTAAACTTAGATTCTTCCAAGACAGAAGTGCCAACGAAAACTTCCGTAGAATTAATTGTTAAGGACAAACAACCCGAGGCCAAATCGCCGAAGAGCGGCGACGTCGTTAAAGAAACAATTAATGCTAATAAGTTCTTGAGACCCACGTCTCTACCATTGAAACCCGGCACGTTTACGCCGAAGAAGCATCACGGGATCACGCCTACGGCGAACACGCTTCCTCTCATCAGTCCGGAGACTCCGCGACCCAAGAAGTCGTATGGACAATTATATCTAAATGGGCATGCTTACACATATCTAGGTCTTAAATGTTCCACCAGGGTGTTTTATTGTACCTTGAATCGACCGCAGCCAATGTATGTCACACAGCAGCACGGTCTGTCGATGTACTCCAATTGGAAGATATGCAAGGAGGCACCACTAGATGTGGACATGGCACACTACGACTCTCGACATAGACCTCTCAATTACACGACCGCTTGGAAGAAACAAGAAGCTATTTTAACTCACTCTTCGCAAAGACCAACCACTCCCACCAGTCCGGACAGTGGATTGGAGAGTGACATGCAGGAGAAGACGAAAAGAGTGAAGATATTTGACGGAGGTTTTGAGAGTAACGAAGATTACACCTATGTGCGCGGAAGAGGACGAGGACGTTATGTCTGCGAAGAATGTGGTATTCGTTGTAAAAAACCATCTATGTTGAAGAAACATATCAGAACACATACGGATGTTAGACCGTATACTTGCAAGCATTGTACCTTTAGtttCAAAACAAAGGGTAATCTTACGAAACACATGAAGTCCAAAGCTCACTACAAAAAGTGTGTGGAATTGGGCGTAGTACCAGTTCCTACAACTGTCTGCGACGAAAATATCGACAAGGAGGCTATCGCGCGATTAGCTGCTGGTGGCGGTAACACGGAAGAATCTtcagaggaggaggaagaaagTGACGGAGAAGAAAGCGAAGAATCGGGCAGCGAGGAGCAAGAAGCAGCACAAAGTCTACTCAGTCTTTCACAACGTAACACGTCGAATAGATTGCCCGGCTTGTTGCCGTCTGGTAGACCCACAACGTATCCATACACGCTAACTTTACCTACGACTTCCACGATGAGCATCGTGTCCACTACCGCGGCTACGTCTACCATCAGTCAAAGTGTCACCACGCAAGAAACAACTTTGATCCAAAATGAATTATCGCATCGTTATTACTTCCCATCAAACCGAAATACGACGGAAGAAACGAGGATCAGTGTCATCCAATCGTCAAAGAAAGATGATTCTGACTTTGAGATCGAGGAAATCACCGAAGTCACGGAGTCACGTCATCAGCTGTCGCAGCCCATGGATCTCACGACGAAGCAGACCACTCAGGTGTTGCCCTCGCCGGTCCCGCGAAGAGTTAGACACGCGGACATTCTGACACCCGTTTCGGAGCCGGTCTTATTGCAGACGATAGTCCAAACAATGGAACGGCTGCCTATACAGGGTAGAGAATGGAAACCGGATGCGGAGGGCCACATGTTGCAGGCCTACCTCACGGAGAGACATGTGATGGACAGCAAAATTAAGCAACAGTATCGCGTGGGAAATACCAAGGACAATAAGCAGATACAGGAAAGAGATATTTACCTGCGTCATCAGGATCAAAATAGGTCCAGGCATATAGATTCCAACGGTATTCCGACGGTGACGTATACTGATCCTAGCAAAATGCAGCATATCGTTATGGAATCTAGGATTAAACCAATGACGAAGCATACCAGTGACGACATTAAGATGGAAATTAGGGAGAAGATTTATCAGAACAATATGGCAATGGAAAGACGAACATTCGATTACGAGGCTATTCACAAGAATAAAGAACAGACTAATCGTATGGTTTCTGATCGTGAAAATTTTGAGCTTGGTCTTACTAACGGTCCCGCTAGCACAAGACCAAGTATTGAGTATGGTCTAGCCATGACCAGGAACAATAGTTCGATCGAGAGATCGAACTGTTCTATTGTACCTGTTCGCAACACATCCAGTATTGATTGTCATTCACcgaaatctttaaatatggACGTCAATAATCGACCACAATTGATGCAACATACGAACAACGACATTGACAGAAATTCCATGTTCAACGCGATGAAGATGGTGAGTGAAATAGAAAGACCTAGGGAATGCCATCCTGTTGGTCAGGAAGTAAGATCTGCTAATCACGAGATGAGAACCGCGACTAATGATATTCGAATGCAGAATCATAGTCCACGAAATCTCGATCTAAGGCCGCCTAGTAGAGAGATCAGAACGCCCGGTCAAGAGTACAGAACACAGAATCAGGAATTGAGGCTACCGAGTCAACAGGAATACAAGATACGCGGTCAAGAAATGAGACCGCCTAGCCGTGAGTACAAACCATCGTTCGTTCACGATATGCAAGTTATTCAGGAGCTTATGCCATCGGCAAACATGGAAATCCGGCAAGCAAATCCAGATAATAGACCGCCGAGCCGTGATATGAGAGCTCTCGCGGAATACAGAACGCATGCGCAAGATCCACGTGCCaattacgaaatattacaGTCTATACACGAACCATCCAAGTCGCAGAACGTAGACGTGAGAAGCACGTCACCGCAAAAAGTACGAATTCTTTATTATGATACGAAACACACTGCAGACATAATTAAACAGAATGCATTAGATAGCATGAAACATGCGGTAGCCGGAAAGATAGTCGTCGGTGGGTCAGATTTTCAATCGCCTTCACCAAACACAGTAAACGCGAAACCGCAAGCGGAATTTCTACAACCGTCGAGTGGACCCGCGCCTAACTATGTCAGTGTCACAGAAGATGGTAGGAGTGTATGTGGGATTTGTAATAAGGTGTTCAGTAAGCCTAGTCAGTTACGGTTGCACCTCaacattcattattttgaGCGGCCATACAAATGCGAAAACTGTGCAGTTTCCTTCCGGACTAAAGGCCACTTGACGAAACATGAAAGATCCGTTTCCCATCACAATAAGgtCAGTATGACTTCTACGTTTGGTGCAGCGACTACTAGCAATCCCAGACCTTTCAAATGTACAGATTGTAAGGTAGCATTCAGAATACATGGACATTTGGCCAAGCATCTTCGCAGCAAGATGCATATCATGAAATTAGAATGCTTGGGCAAACTGCCTTTTGGAACATATGCAGAGATGGAAAGGTCTGGCATCAACTTGAATGATATCGATACTACAGACTGTGATAATAGTCTTAATAGTCTGCAGATGTTGGCTCAAAGATTAGGCGAAAAGGATCCAGCGAAAATCGCGCAGTGGGACTCGGAAACTCTGCCCGGACCGGTCGTGAGTGGCAGTGAGACTTCGTCAGATGAGGGTGAGCCTATACCGCAGCACGCACTTCATGCAACATACGTGAAAGCGACAACAGACGCAGACATTTCTCGACCATATCACATGTCAATCGTCCCCGAGAAACCGAAAGCCATTAACGACGTTCGCCTCCGCAGTCCTCAGTTCAATCAGCATAGACGTGATTACTCTGTTAAAGAGCAGCGATCAATTCCGGTGGTCGTTCCGGAAGACGCAAGACCGGAAGACAGTTTACAATCGTACAAGTGCCAAGTTTGCCCCGTATCTATGCGTACTGTAAATGAATTACAGGTACACTGTTTTGTTGAACATAATATTGAGACGGATTCTAGGAAAAAGAGAATActcaaaaaagaattatggACGAATCCGTAG
Protein Sequence
MTTETHTVAMTDPQLTNNNNNNNNNNNNDGEPKYLHKKFKKMATTEVTPKVVEKEGTANNVIFDEAPKRKDDNKDGKESSKELGNKLEPSPEPTGGVEPIAESRKSGSYACPFCPMTWTKPSVLQKHIRAHTNERPYPCVPCGISFKTKSNLYKHCRSRSHAHKMEKGEKVSEDSDISLSDSASNGTGTPPPPPASTSTTATTTVSTAVVKTVKTGKIYKPKFQARTALQCVNSDTETSSLSPSSSNSSCLSSSTNTSTSNSVKPKAEQLQEHIDKIITDNQAIVDAVDPCLHKLMHRQHSLVETKQSFEQQPLNLSSAEEILNNRKRCYSDSCAQEAKDELPDSSIIKDLLLKTRGSMNGPVLETAVENFVCPTCNIPYTSIDNLEAHRRYYCKGIDNSRKGTDYHADLEKRDSDFDVKSADYYSTLQPLPSPGPLLGNTRLVDAYAPPAKKQRTETVPTSLRSLEELSKYPRPNSLQMFGGEVRILDNTGEVTKTMRIEPRQTNSPTNEHVVNSKCINSETASIVVKSGLHSGGTMMHKPPEISANTSNSSISLPNAPKILAPIIPNISTPNIAPTMSCYDYLESHLNPLTSITAYNPLTLPQAGITSILHGGKVIPYVPGMPGPHTLTGTPTIDISPSITAGEAGYKVIPGLPGLHMIPQPLDLASSVKVQPSTVPGMPSPLSGHVPSLLDQPLDLASPAKESMKIRFKTPHGAGVXSPKVPNVKVETSTDKYRTRMPSTLTGGETGKAELDRHIKNNTAVKYRSIESPRERKDFTYDKSPKLDKTFSYPNGVDPTISSNSYNKMRYSPKTISENKKRSSNWGVSEVDAGRALPIDTHTAISKLDLPVHENGRLKNSVPSDTRGWIKVADGYGAFNGAKIKADNASSVILVNLDSSKTEVPTKTSVELIVKDKQPEAKSPKSGDVVKETINANKFLRPTSLPLKPGTFTPKKHHGITPTANTLPLISPETPRPKKSYGQLYLNGHAYTYLGLKCSTRVFYCTLNRPQPMYVTQQHGLSMYSNWKICKEAPLDVDMAHYDSRHRPLNYTTAWKKQEAILTHSSQRPTTPTSPDSGLESDMQEKTKRVKIFDGGFESNEDYTYVRGRGRGRYVCEECGIRCKKPSMLKKHIRTHTDVRPYTCKHCTFSFKTKGNLTKHMKSKAHYKKCVELGVVPVPTTVCDENIDKEAIARLAAGGGNTEESSEEEEESDGEESEESGSEEQEAAQSLLSLSQRNTSNRLPGLLPSGRPTTYPYTLTLPTTSTMSIVSTTAATSTISQSVTTQETTLIQNELSHRYYFPSNRNTTEETRISVIQSSKKDDSDFEIEEITEVTESRHQLSQPMDLTTKQTTQVLPSPVPRRVRHADILTPVSEPVLLQTIVQTMERLPIQGREWKPDAEGHMLQAYLTERHVMDSKIKQQYRVGNTKDNKQIQERDIYLRHQDQNRSRHIDSNGIPTVTYTDPSKMQHIVMESRIKPMTKHTSDDIKMEIREKIYQNNMAMERRTFDYEAIHKNKEQTNRMVSDRENFELGLTNGPASTRPSIEYGLAMTRNNSSIERSNCSIVPVRNTSSIDCHSPKSLNMDVNNRPQLMQHTNNDIDRNSMFNAMKMVSEIERPRECHPVGQEVRSANHEMRTATNDIRMQNHSPRNLDLRPPSREIRTPGQEYRTQNQELRLPSQQEYKIRGQEMRPPSREYKPSFVHDMQVIQELMPSANMEIRQANPDNRPPSRDMRALAEYRTHAQDPRANYEILQSIHEPSKSQNVDVRSTSPQKVRILYYDTKHTADIIKQNALDSMKHAVAGKIVVGGSDFQSPSPNTVNAKPQAEFLQPSSGPAPNYVSVTEDGRSVCGICNKVFSKPSQLRLHLNIHYFERPYKCENCAVSFRTKGHLTKHERSVSHHNKVSMTSTFGAATTSNPRPFKCTDCKVAFRIHGHLAKHLRSKMHIMKLECLGKLPFGTYAEMERSGINLNDIDTTDCDNSLNSLQMLAQRLGEKDPAKIAQWDSETLPGPVVSGSETSSDEGEPIPQHALHATYVKATTDADISRPYHMSIVPEKPKAINDVRLRSPQFNQHRRDYSVKEQRSIPVVVPEDARPEDSLQSYKCQVCPVSMRTVNELQVHCFVEHNIETDSRKKRILKKELWTNP