Basic Information

Insect: Cyphomyrmex costatus
Gene Symbol: HIVEP1
Assembly: GCA_001594065.1
Location: NW:4052437-4077657[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.0016 0.098 12.6 0.2 1 23 110 132 110 132 0.97

2 9 6.4e-05 0.004 17.0 1.8 1 23 138 162 138 162 0.91

3 9 0.00076 0.047 13.6 0.0 1 21 372 392 372 393 0.96

4 9 1.3e-06 8e-05 22.3 1.6 1 23 1118 1140 1118 1140 0.99

5 9 5.8e-06 0.00036 20.2 5.2 1 23 1146 1170 1146 1170 0.92

6 9 2.9e-06 0.00018 21.2 0.2 2 23 1852 1873 1851 1873 0.97

7 9 0.0001 0.0062 16.4 1.9 1 23 1879 1903 1879 1903 0.92

8 9 0.002 0.12 12.3 3.2 1 23 1924 1948 1924 1948 0.93

9 9 0.15 9.4 6.3 0.9 1 19 2105 2123 2105 2128 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.0016	0.098	12.6	0.2	1	23	110	132	110	132	0.97
2	9	6.4e-05	0.004	17.0	1.8	1	23	138	162	138	162	0.91
3	9	0.00076	0.047	13.6	0.0	1	21	372	392	372	393	0.96
4	9	1.3e-06	8e-05	22.3	1.6	1	23	1118	1140	1118	1140	0.99
5	9	5.8e-06	0.00036	20.2	5.2	1	23	1146	1170	1146	1170	0.92
6	9	2.9e-06	0.00018	21.2	0.2	2	23	1852	1873	1851	1873	0.97
7	9	0.0001	0.0062	16.4	1.9	1	23	1879	1903	1879	1903	0.92
8	9	0.002	0.12	12.3	3.2	1	23	1924	1948	1924	1948	0.93
9	9	0.15	9.4	6.3	0.9	1	19	2105	2123	2105	2128	0.94

Sequence Information

Coding Sequence: ATGACGACAGAGACCCATACTGTGGCGATGACAGACCCACAGCTgaccaataataataacaataacaacaacaacaacaacaacaacgaTGGCGAGCCAAagtatttacacaaaaaattcaagaagaTGGCGACGACTGAAGTTGCGCCGAAAGTCGTTGAGAAGGAGGGCACGACAAACAACGCCGTTCCTGACGAGGCACCAAAGCGAAAGGACCACGACAAGGACGGCAAGGAGTCGTCGAAGGAACTCGGCAACAAACTCGACCCTTCCCCGGAGTCGGCAGGGGGTGTCAAACCCACTGCCGAGTCTCGGAAGAGCGGCGGCTACGCGTGCCCTCACTGCCCGATGACATGGACCAAGCCGAGTGTCCTTCAGAAGCACATCAGAGCACATACAAACGAACGACCGTTTCCGTGTCCTTCATGTGAAATCTCCTTCAAGACCAAATCAAATCTGTACAAGCACTTCAGGTCGCGTTCTCATGCACACAAGAtggagaaaagagagaagGTATCCGAGGATTCCGATATAAGTCTGTCGGATAGCGCCAGTAATGGTACTGGTacaccaccgccgccgctaGCTTCGACACCCACAACGTCAACGACGACAGTATCCACTGCTGTAGTAAAGACCGTGAAAACCGGCAAAATCTACAAGCCAAAGTTTCAAGCCCGAACAGCACTGCAGTGCGTAAACAGTGACACCGAAACGTCTTCCTTATCGCCCACTTCTTCTAACAGTTCCTCCTTGTCTTCTTCCACAACCACTTCTACTTCTAATTCTGTTAAATCTAACGCGGAACAGCTACAGGAGCATATCGACAAGATCATCACAGACAATCAGGCGATCGTCGACGCAGTGGATCCACGTCTGCATAAACTAATGCATCGCCAACAAAGCCTAGTCGAGACAAAGCAGTCATTTGAACAGCAGCCATTGAACTTGTCTTCCGTGGAGGAGACCTTGAACAGCAGAAAGCGTTGTTACAGCGATAGTTGCACTCAGGAAGCGAAAGATGAGTTATCGGATAACTCGATCATCAAGGATCGCCTGTTGAAAACTCGCGGTTCTATGAACGGACCGATACCGGAGACTGCCGTAGAAAATTTTGTCTGTCCCACGTGTAACATCCCCTATACTAGTATAGACAATTTAGAGGCTCATCGCAGATATTACTGTAAAGGTATTGATAATTCTCGAAAAGGAACCGATTATCACGCGGACTTAGAAAAACGAGATTCTGATTTCGATGTAAAATCTGCCGATTATTATAGCACTTTGCAACCGTTGCCCTCGCCGGGTCCTCTACTAGGTAACACCAGACTAGTCGACGCGTATGCTCCACCAGCCAAGAAGCAAAGAACGGAAAATGTGCCAACCAGTTTAAGATCGCTTGAGGAACTTAGCAAGTACCCGCGTCCAAACTCGCTGCAGATGTTCGGTGGTGAAGTAAGGATCCTCGACAACACGGGCGAAGTAACGAAAACGATGAGGATCGAACCACGACAGACAAATTCGCCCACAAATGAGCATGTAGTCAACAACAAGTGCATGAACTCGGAGACGGCGTCGATAGTGGTGAAATCGGGACTTCATTCTGGTGGTACCATGATGCATAAACCGCCGGGAACGTCGGCTAGCACATCCAATTCCTCCATATCCCTGCCTAATGCACCGAAGATATTGGCGCCCATCATACCAAACATATCAACTCCGAATATAGCGCCTACCATGTCCTGCTACGACTATTTAGAATCGCACCTCAACCCGCTGACGAGCATCACTGCCTACAATCCGTTGACTCTACCGCAAGCTGGTATCACAAGTATTCTCCATGGCGGAAAGGTGATACCTTATGTACCTGGTATGCCCGGACCACATACTCTGACCGGTACGCCGACTATAGACATATCTCCGAGCATAACGGCTGGCGAAGCCGGTTATAAAGTGATACCGGGCCTACCGGGCTTACACATGATACCTCAGCCACTGGACCTGGCTAGTCCAGTGAAGGTACAGCCCAATACAGTGCCTGGTATGCCCAGTCCATTGTCTGGACATGTTCCTTCCATGCTGGATCAGCCTCTGGATTTAGCTAGTCCGGCAAAGGAGTCATTGAAGATTAGTTTCAAGACACCTAATGGCGATGGTCTGAAGAGCAGCTTAACCAGTCCTAAAGTTCCTAACGTCAAGGTCGAAACTTCGACAGACAAGTATCGCACAAGGATACCGTCAACTCTCACCGGTGGAGAAACCGGCAAAGCAGAGCTCGATCgtcatatcaaaaataatacggCCGTAAAGTACAGGAGTGTAGAGAGTCCGCGAGAGAGGAAGGATTTTACATACGACAAGAGTCCAAAGTTTGACAAGACTTTTAGTTATCCAAATGGCGTGGATCCTACAATTTCTTCGAACTCTTACAGTAAGATGAGATACTCGCCCAAGACCATCTCGGAAAGCAAGAAAAGATCACCGAATTGGGGTATTAGTGAAGTGGATGTTGGCAGAGCACTCCCGGTAGATACGCACACAGCAATCTCTAAATTAGACCTACCTGTTCACGAGAACggtcgattaaaaaataatgtttcttcGGATACACGTGGATGGATTAAAGTCGCGGACGGATACAGCGCATTTAACGGCGCTAAGACAAAGGCCGACAACGCGTCATCGGTAATACTTGTAAACTTAGATTCTTCCAAGACAGAAGTGCCAACGAAAACTTCCGTAGAATTAATTGTTAAGGACAAACAACCCGAAGTCAAATCACCGAAGAGCGGTGACGTTGTTAAAGAAACAACAAACGCTAATAAGTTCTTGAGACCTACGTCTCTACCATTGAAACCCGGCACGTTTACGCCGAAGAAGCATCACGGGATCACGCCTACGGCGAACACACTTCCTCTCATCAGTCCGGAGACTCCGCGACCCAAGAAGTCGTACGGACAACTATATCTAAATGGGCATGCTTACACATATCTAGGTCTCAAGTGTTCCACCAGGGTGTTTTATTGTACTTTGAATCGACCGCAGCCAATGTATGTCACACAGCAGCATGGTCTATCGATGTACTCCAATTGGAAGATATGCAAGGAGGCACCACCAGATGTGGACATGGCACATTACGACTCTCGACATAGACCTCTCAATTACACGACCGCTTGGAAGAAACAAGAGGATATTTTAACACACTCTTCGCAAAGACCAACCACTCCCACCAGTCCGGACAGCGGATTAGAGAATGACATGCAAGAGAAGACGAAGAGGGTGAAGATATTTGACGGAGGCTTTGAAAGTAACGAAGATTACACTTATGTGCGCGGAAGAGGACGAGGACGTTATGTCTGCGAAGAATGTGGTATTCGTTGTAAAAAACCATCTATGTTGAAAAAACATATCAGAACACATACGGATGTTAGGCCGTATACTTGCAAGCATTGTACCTTTAGTTTCAAGACAAAGGGTAATCTCACAAAACACATGAAGTCCAAGGctcattacaaaaaatgtgtGGAATTAGGCGTAGTACCAGTCCCTACAACTGTCTGCGACGAAAATATCGACAAGGAGGCTATCGCGCGATTAGCTGCTGGTGGCGGTAACACGGAAGAATCCTcagaggaggaggaagaaagTGACGGAGAAGAAAGCGAAGAGTCGGGTAGCGAGGAGCAAGAAGCAGCACAAAGTCTACTCAGTCTTTCACAACGTAATACGTCGAATAGATTGCCGGGCTTGTTGCCATCTGGTAGGCCCTCAACGTATCCATACACGTTAACTTTACCGACAACTTCCACGGTAAGCATCGCACCCACTACCGCGACTACATCTACCATCAGTCAAAGCGTCACCACGCAAGAAACAACTTTGATCCAAAATGAATTATCGCACCGTTATTATTTCCCATCAAATCGAAATACGACGGAAGAAACGAGGATCAGTGTTATCCAATCGTCAAAGAAAGATGATTCTGACTTTGAGATCGAAGAAATCGCCGAAGCTACGGAGTCGCGTCATCAGCTGTCACAGCCCATGGATCTCACGACGAAGCAGACCACTCAGGTGTTGCCTTCGCCGGTCCCGCAAAGGGTTAGACCCGCGGATATTCTGACACCCGTTTCGGAGCCGGTCTTATTGCAGACGATAGTCCAGACGATGGAACGGCTACCTATACAGGGTAGAGAATGGAAACCGGATGCGGAGGGCCACATGTTGCAGGCCTACCTCACAGAGAGACATGTGATGGACAGCAAAATTAAGCAGCAGTATCGCGTGGGAAATACCAAGGACAATAAGCAGATACAGGAAAGAGATATTTACCTACGTCATCAGGATCAGAATAGGTCCAGGCACATAGATTCCAATGGTATTCCGACGGTGACATACACCGATCCTAGCAAGATGCAGCATACCGTTATGGAATCTAGGGTTAAACAAATGACGAAGCATACCAGTGACGATATTAAGATGGAAATCAGGGAGAAGATTTATCAGAACAATATGGCGATAGAGAGACGAACATTCGATTACGAGACTATTCACAAGAATAAAGAACAAACTAATCGTATGATTTCTGATCGTGAAAATTTTGAGCTTGGTCTAACTAACGGTCCCGCTAGCACAAGACCAGGTATTGAATATGGTCTATCTATGATCAGGAACAATAATTCGATCGAAAGACCGAACTGTTCTATTGTACCTGTTCGCAACACGTCCACTATTGATTGTCATTCGccgaaatctttaaatatggACGTCAATAATCGACCACCGTTGATGCAACACACGAACAATGACATTGACAGAAGTTCCATGTTCAACGCAATGAAGATGGTGAGTGAAATGGAAAGACCTAGAGAATGCCATCCTGTCGGTCAGGAAGTAAGATCTGCTAATCAAGAGATGAGATCCGCGACTAACGATATTCGAATGCAGAATCATAGTCCACGAAATCTCGACCTAAGACCACCAAGTAGAGAGATCAGAACACCCGGTCAAGAGTATAGAACACAGAATCAGGAATTGAGGTTGCCGAATCAACAGGAGTACAAGATACGCGGCCATGAGATGAGACCGCCTAGCCGTGAGTACAAGCCGTTCGCTCACGATATGCAAGTTATGCAGGAGCTTATGCCATCGGCAAACATGGAAATCCGGCAAACAAATCCAGATAATAGACCACCAAGCCGTGATATGAGAGCTCTCGCGGAATACAGAGCGCATGTGCAAGATTCACGCACCAACTACGAAATATTACAGCCTATCCACGAGCCACTCAAGTCGCAAAACATAGACGCAAGAAGCACGTCACCTCAAAAAGTACGAATCCTCTATTACGACACCAAACACACTGCGGACATGGTTAAACAGAATGCATTAGATAGCATGAAGCACGCGATAGCTGGAAAGATAGTCGTCGGTGGATCAGATTTTCAATCGCCTTCAACAAACACAGGAAACGGGAAACCACAAGCGGAATTTCTACAACCGTCGAGTGGACCCGCGCCTAATTATGTCAGTGTCACGGAAGATGGTAGGAGTGTATGTGGGATTTGTAATAAGGTGTTCAGTAAGCCTAGTCAGTTACGGTTGCACCTCAACATTCATTATTTTGAGCGGCCATATAAATGCGAAAACTGTGCAGTTTCCTTCCGGACTAAAGGCCACTTGACGAAACACGAAAGATCCGTTTCCCATCACAATAAGgtCAGTATGACTTCTACGTTTGGTGCGGCGACTACTAGCAATCCCAGACCTTTCAAGTGTACAGATTGTAAGGTAGCATTCAGAATACATGGACATTTGGCCAAGCATCTTCGTAGCAAGATGCATATCATGAAATTAGAATGCTTGGGCAAACTGCCGTTTGGAACATATGCAGAGATGGAAAGGTCTGGCGTCAACTTGAATGATATCGATACTACAGACTGTGATAATAGTCTTAATAGTCTGCAGATGTTGGCTCAAAGATTAGGCGAAAAGGATCCGGCGAAAATGGCGCAGTGGGATTCGGAAGCTCTGCCCGGACCGGTTGTGAGTGGCAGTGAGACTTCGTCAGATGAGGGTGAGCCTATACCGCAGCACACACTTCATGCGCAATATATGAAAGCGACAACGGACGCAGACATCTCTCGATCATATCAAATGTCAATCGTCCCCGAGAAACCGAAAGCCATTAACGACGTTCGCCTCCGCAGCCCTCAGTTCAATCAACATAGACGTGATTACGCCGTTAAAGAGCAGCGACCAATTCCGACGGTCATTCCGGAAGACGCAAGGTCGGAGGACAGTTTACAATCGTACAAGTGCCAAGTTTGCCCCGTATCTACGCGTACTGTAAATGAGTTACAGGTACACTGTTTTGTTGAACATAATATTGAGACGGATTCTAGTACAAATATTCATGGAGATAGAAGTGCGGGTAAATGTAGGGAAAAAGAGAATactcaaaaaagaattatggAGGAATCCGTAGTGAAGGAAGATCACAAAAGACAAAGGATAGAAGATACATAG
Protein Sequence: MTTETHTVAMTDPQLTNNNNNNNNNNNNNDGEPKYLHKKFKKMATTEVAPKVVEKEGTTNNAVPDEAPKRKDHDKDGKESSKELGNKLDPSPESAGGVKPTAESRKSGGYACPHCPMTWTKPSVLQKHIRAHTNERPFPCPSCEISFKTKSNLYKHFRSRSHAHKMEKREKVSEDSDISLSDSASNGTGTPPPPLASTPTTSTTTVSTAVVKTVKTGKIYKPKFQARTALQCVNSDTETSSLSPTSSNSSSLSSSTTTSTSNSVKSNAEQLQEHIDKIITDNQAIVDAVDPRLHKLMHRQQSLVETKQSFEQQPLNLSSVEETLNSRKRCYSDSCTQEAKDELSDNSIIKDRLLKTRGSMNGPIPETAVENFVCPTCNIPYTSIDNLEAHRRYYCKGIDNSRKGTDYHADLEKRDSDFDVKSADYYSTLQPLPSPGPLLGNTRLVDAYAPPAKKQRTENVPTSLRSLEELSKYPRPNSLQMFGGEVRILDNTGEVTKTMRIEPRQTNSPTNEHVVNNKCMNSETASIVVKSGLHSGGTMMHKPPGTSASTSNSSISLPNAPKILAPIIPNISTPNIAPTMSCYDYLESHLNPLTSITAYNPLTLPQAGITSILHGGKVIPYVPGMPGPHTLTGTPTIDISPSITAGEAGYKVIPGLPGLHMIPQPLDLASPVKVQPNTVPGMPSPLSGHVPSMLDQPLDLASPAKESLKISFKTPNGDGLKSSLTSPKVPNVKVETSTDKYRTRIPSTLTGGETGKAELDRHIKNNTAVKYRSVESPRERKDFTYDKSPKFDKTFSYPNGVDPTISSNSYSKMRYSPKTISESKKRSPNWGISEVDVGRALPVDTHTAISKLDLPVHENGRLKNNVSSDTRGWIKVADGYSAFNGAKTKADNASSVILVNLDSSKTEVPTKTSVELIVKDKQPEVKSPKSGDVVKETTNANKFLRPTSLPLKPGTFTPKKHHGITPTANTLPLISPETPRPKKSYGQLYLNGHAYTYLGLKCSTRVFYCTLNRPQPMYVTQQHGLSMYSNWKICKEAPPDVDMAHYDSRHRPLNYTTAWKKQEDILTHSSQRPTTPTSPDSGLENDMQEKTKRVKIFDGGFESNEDYTYVRGRGRGRYVCEECGIRCKKPSMLKKHIRTHTDVRPYTCKHCTFSFKTKGNLTKHMKSKAHYKKCVELGVVPVPTTVCDENIDKEAIARLAAGGGNTEESSEEEEESDGEESEESGSEEQEAAQSLLSLSQRNTSNRLPGLLPSGRPSTYPYTLTLPTTSTVSIAPTTATTSTISQSVTTQETTLIQNELSHRYYFPSNRNTTEETRISVIQSSKKDDSDFEIEEIAEATESRHQLSQPMDLTTKQTTQVLPSPVPQRVRPADILTPVSEPVLLQTIVQTMERLPIQGREWKPDAEGHMLQAYLTERHVMDSKIKQQYRVGNTKDNKQIQERDIYLRHQDQNRSRHIDSNGIPTVTYTDPSKMQHTVMESRVKQMTKHTSDDIKMEIREKIYQNNMAIERRTFDYETIHKNKEQTNRMISDRENFELGLTNGPASTRPGIEYGLSMIRNNNSIERPNCSIVPVRNTSTIDCHSPKSLNMDVNNRPPLMQHTNNDIDRSSMFNAMKMVSEMERPRECHPVGQEVRSANQEMRSATNDIRMQNHSPRNLDLRPPSREIRTPGQEYRTQNQELRLPNQQEYKIRGHEMRPPSREYKPFAHDMQVMQELMPSANMEIRQTNPDNRPPSRDMRALAEYRAHVQDSRTNYEILQPIHEPLKSQNIDARSTSPQKVRILYYDTKHTADMVKQNALDSMKHAIAGKIVVGGSDFQSPSTNTGNGKPQAEFLQPSSGPAPNYVSVTEDGRSVCGICNKVFSKPSQLRLHLNIHYFERPYKCENCAVSFRTKGHLTKHERSVSHHNKVSMTSTFGAATTSNPRPFKCTDCKVAFRIHGHLAKHLRSKMHIMKLECLGKLPFGTYAEMERSGVNLNDIDTTDCDNSLNSLQMLAQRLGEKDPAKMAQWDSEALPGPVVSGSETSSDEGEPIPQHTLHAQYMKATTDADISRSYQMSIVPEKPKAINDVRLRSPQFNQHRRDYAVKEQRPIPTVIPEDARSEDSLQSYKCQVCPVSTRTVNELQVHCFVEHNIETDSSTNIHGDRSAGKCREKENTQKRIMEESVVKEDHKRQRIEDT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00015593;
90% Identity: iTF_00014945;
80% Identity: -