Veme008537.1
Basic Information
- Insect
- Vollenhovia emeryi
- Gene Symbol
- HIVEP1
- Assembly
- GCA_000949405.1
- Location
- NW:239149-271376[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 0.0015 0.12 12.5 0.0 1 23 109 131 109 131 0.97 2 9 0.00024 0.019 15.0 2.9 1 21 137 157 137 161 0.89 3 9 0.00069 0.053 13.6 0.0 1 21 370 390 370 391 0.96 4 9 1.2e-06 9.1e-05 22.3 1.6 1 23 1113 1135 1113 1135 0.99 5 9 5.3e-06 0.00041 20.3 5.2 1 23 1141 1165 1141 1165 0.92 6 9 4.1e-06 0.00032 20.6 0.2 3 23 1848 1868 1846 1868 0.97 7 9 0.00012 0.0095 16.0 3.4 1 23 1874 1898 1874 1898 0.92 8 9 0.0018 0.14 12.3 3.2 1 23 1919 1943 1919 1943 0.93 9 9 0.57 44 4.4 0.7 1 19 2101 2119 2101 2124 0.93
Sequence Information
- Coding Sequence
- ATGACGACAGAGACCCATACTGTGGCGATGACAGACCCACAGCTGACcaataacaacaacaacaacaataacaacaacaacaacaacgatGGCGAGCCAAAGTACCTGCACAAGAAGTTCAAGAAGATGGCGACGACCGAAGTTGCGCCGAAAGTCGTCGAGAAGGAGGGCACGGCGAATAACGTCGCCTCCGATGAGACCCCCAAGCGAAAGGACGATGCCAAGGACGGCAAGGAGTCGTCGAAGGAGCTCGGCGGCAAGCTCGAACCTTCCCCGGAACCGGCAGGGGGAGTCGAGCCCGCCGCCGAGTCCCGGAAGAGTGGCTACGCGTGTCCTTACTGCCCGATGACGTGGACCAAGCCGAGTGTTCTTCAGAAACACATCAGGGCGCACACGAACGAACGGCCGTATCCGTGCGCGCTCTGCGGAATCTCCTTCAAGACCAAGTCGAATTTGTACAAGCACTGCAGGTCGCGCTCTCACGTGCACAAGATGGAGAAGGGGGAGAAGGTGTCCGAGGATTCCGACATAAGTCTGTCAGATAGTGCCAGTAATGGCACCGGgacaccaccgccgccgccagcTTCGACGCCCACAACGGCCACGACGACGGTATCTACCGCCGCAGTGAAGACCGTGAAGACCGGCAAGATCTACAAGCCGAAGTTTCAAGCCCGAACGGCCCTGCAGTGCGTGAACAGCGACACCGAAACGTCTTCCTTATCGCCCAGTTCTTCCAACAGTTCCTCCTTGTCTTCCTCTACGACCACCTCCAACTCTGTTAAACCGAACGCGGAACAGTTGCAGGAGCACATCGACAAGATTATTACGGACAATCAGGCGATCGTTGACGCGGTAGATCCATGCCTGCACAAACTGATGCACCGCCAGCAGAGCTTGGTGGAGACCAAGCAGTCGTTTGAGCAGCAGCCGTTGAACTTGTCTTCCGCAGAGGAGTCTTTAAACGTCAGAAAGCGTTGCTACAGCGACAGCTGCGCGCAAGAAGCGAAAGACAACGAGCTTCCGGAAAGTTCGATCATCAAAGATCTCCTGTTGAAAACTCGCGGTTCCATGAACGGACCGATACTGGAGACCGCGGTGGAAAACTTCGTCTGTCCCACTTGCAACATCCCCTACACTAGCATAGATAATTTAGAGGCTCACCGTAGGTATTATTGCAAGGGTATCGACAGTTCGCGAAAAGGAGCGGATTATCATACGGACTTGGAGAAGCGAGATTCTGATTTCGACGTGAAATCTTCCGATTATTACAGTACCTTGCAACCGTTACCCTCGCCGGGTCCTCTGCTGGGTAATACTAGACTAGTCGACGCGTACGCTCCGCCTGCCAAAAAGCAAAGAACGGAATCCGTGCCGACCAGTTTGAGGTCGTTGGAAGAGCTCAGCAAATACCCGCGTCCGAACTCGCTGCAGATGTTCGGCGGCGAAGTGAGGATTCTCGACAACACGGGCGAGGTGACGAAGACAATGAGAATCGAGCCACGGCAGACGAATTCGCCCACGAGCGAGCACGTGGTCAACAGCAAGTGCATGAACTCGGAGACGGCGTCGATAGTGGTGAAATCGGGACTCCATTCTGGCGGTACCATGATGCACAAGCCGCCAGGCACATCGGCCAACACGTCCAACTCCTCCATATCCCTGCCCAATGCGCCCAAGATATTGGCGCCCATCATACCGAACATATCAACCCCGAATATAGCGCCCACCATGTCCTGCTACGACTACTTGGAATCGCACCTCAACCCGCTGACGAGTATCACTGCCTACAATCCGTTGACTCTGCCGCAAGCTGGTATCACGAGTATCCTCCATGGCGGCAAGGTGATACCTTATGTGCCTGGTATGCCTGGACCGCACACTCTGACCGGTACACCGACCATAGACATATCTCCGAGTATAACGACCGGCGAAGCCGGTTTCAAGGTGATACCGGGCCTACCGGGTCTACATATGATAACTCAGCCGCTGGATCTGGCCAGTCCGGTCAAAGTACAGCCCAGCACGGTGCCTGGCATGCCTAGTCCGTTGTCCGGACACGTTCCTCCCATGTTAGATCAGCCTCTGGATCTGGCTAGTCCGGCGAAGGAACCGATGAAGATCAGTTTCAAGACACCCAACGGCGACGGTCTGAAGAGCGGCCTGACCAGTCCCAAAGTTCCTAGCGTCAAGGTCGAGACCTCGACGGACAAGTATCGCACGAGGGTACCGTCGACTCTCACCGGCGGAGAGACTGGCAAAGCGGAGCTCGATCGTCATATCAAAAATAATACGACCGTCAAGTACAAGAGTATAGAGAGTCCGCGGGAGAGGAAGGATTTCGCGTACGACAAGAGCCCGAAACTGGACAAGGCTTTTAGTTATCCGAACGGCGTGGACCCCACCATCTCCTCCAACTCTTACAGCAAAATGAGATACTCGCCCAAGACCGTTCTGGAAAGCAGGAAGAGATCGTCAAATTGGGGCGTTAGTGAAATGGATGCTGGCAGAGCAGCTCCGGTAGACACTGCAATCCCCAAGTACGATCTACCTCCTCATGAGAACGGTCGATTAAAGAATAGCGTCTCTTCGGATGCACGTGGATGGATGAAGGTTGCGGATGGATACGGCGCGTTCAACGGCGCCAAGATGAAGGCCGACAACGCGCCGTCGGTGATACTTGTCAACCTAGACTCTTCCAAGACAGAAGTGCCAACGAAAACTTCCGTAGAATTAATTGTTAAGGACAAGCAACCCGAGGCCAAATCGCCCAAGAGCGATGTCGCGAAAGAAACGACTAGTGCTAATAAGTTCTTGAGACCCACGTCTCTGCCGTTGAAACCCGGCACGTTTACGCCGAAGAAGCATCACGGGATCACGCCTACGGCGAATACACTTCCTCTCATCAGTCCGGAGACTCCGCGACCCAAGAAGTCGTACGGGCAACTATATCTAAATGGGCATGCCTACACATATCTGGGACTCAAGTGTTCCACTAGGGTGTTTTATTGTACTCTGAATCGACCGCAGCCAATGTACGTAACGCAGCAGCACGGTCTGTCGATGTACTCCAATTGGAAGATATGCAAAGAGGCACCACCGGACGTGGACATGGCGCACTATGACTCTCGAAATAGGCCCCTCAACTTCACGACCGCGTGGAAGAAACAAGAGGACATCCTAACGCACTCCTCGTATAGACCAACCACTCCGTCCAGTCCGGACAGCGGACTAGATAGCGACATGCAGGAGAAGACGAAAAGGGTCAAGATATTTGACGGAGGCTTCGAGAGCAACGAAGATTACACTTATGTGCGCGGGAGAGgTCGAGGACGCTATGTCTGCGAAGAATGCGGTATTCGTTGTAAGAAACCATCTATGCTGAAGAAACATATCAGGACACATACGGATGTTAGGCCATACACGTGCAAGCATTGTACCTTTAGTTTTAAAACAAAGGGTAACCTCACGAAACACATGAAGTCCAAGGCTCACTACAAGAAGTGCGTGGAATTGGGCGTGGTGCCAGTCCCCACAACCGTCTGCGACGAAAACATCGATAAGGATGCTATCGCGCGACTAGCCGCCGGTGGCGGTAACACGGAGGAATCTtcagaggaggaggaagagactGACGGAGAGGAAAGCGATGAATCTGGTAGCGAGGAGCAGGAAGCGGCGCAGAGTCTACTGAGTCTTTCGCAGCGTAACACGTCGAGCAGATTGCCGGGTTTGCTGCCGTCCGGCCGACCCACAACGTATCCGTACACGTTAACTATACCGACGACTTCCGCAGTGAGCGTCGCGTCCACCACCGCGACTACATCGACCGTGAGTCAAAGCGTCACCACCCAGGGAACGGCTCTGATCCAAAGCGAATTATCGCACCGTTACTACTTCCCGTCGAATCGAAGTGCGACGGAAGAAACGAGGATCAGCGTCATTCAATCGTCGAAGAAAGACGACTCCGACTTTGAGATCGAGGAAATCACCGATGTCGCGGAGTCGCGCCATCAGCTGTCGCAGCCCATGGATCTCACGACGAAGCAGACCACTCAAGTGTTGCCCTCGCCGGTACCGCATAGAGCAAGACCCGTGGACATTCTGACACCCGTTTCGGAGCCGGTCCTACTCCAGACGATAGTCCAAACGATGGAACGGCTGCCTATACAGGGTAGAGAATGGAAACCGGACGCGGAGGGACACATGTTGCAGGCCTACCTCACGGAGAGACATGTGATGGACAGCAAAATTAAGCAGCAGTATCGCGTGGGAAGTACCAAGGACAACAAACAGATACAGGAGAGAGACGTTTACCCGCGGCATCAAGATCCGAGCAGGCCCAGGCACGTAGAGTCCAACGGCACTCCAACGGTGACGTACACCGATCCCAGCAAGATGCAACATACCGTTAGCGAGTCTACGATCAAGTACATAACGAAGTTAAGTGAGGACATTAAGATGGAAATCAGGGAAAAGATTTATCAGAACAACATGACGATGGAGAGACGAACGTTCGATTACGAGGCTATTCACAAAAGTAAGGAACAGACTAACCGTATGGTTTCGGATCGTGAGAATTTTGAGCTTGGTCTAACCAATGGTCCCGCTGGCGCGAGACCGAGTATCGAGTACGGTCTGCCCATGGCCAGGAACGGTGGTTCGATCGAGAGACCGAATTGTTCTATTGTACCCATTCGCAGCACGTCCCGTATCGATTGCCATTCACCGAAATGCCTGAATATGGACGTCAACAACCGACCACCGTTGATGCAACACGCGAACAACGATATCGATAGAAGTTCCATGTTCAACGCGATGAAGATGGTGAGCGAGATGGAAAGACCTAGGGAGTGCCATCCCGTCGGTCAAGAAATGAGGTCTGCGAGTCACGAGATGAGACCCGCAGCCAACGATGTTCGAATGCAGAATCACAGTCCGCGGAATCTCGACCTGAGGCCGCCCAGTAGAGAGATCAGAACGCCCGGTCAAGAGTACAGAGCGCAGAGTCAAGAACTCAGGCTACCGAGTCAACAGGAGTACAAGATACGCGGTCAAGACATAAGACCGCCCAGTCGTGAATACAAGCCGGCGTTCGCTCATGACATGCAGGTCATTCAGGAGCTCATGCCGTCAACAAACATGGAAATCCGGCAGACGAATCCGGATAATAGACCGCCGAGCCGTGACATGAGAGGCCTCGCGGAGTACAGAGCGCACGCGCAAGACCCACGTGCCAGCTACGAGATGTTGCAGCCTATACACGAGCCGCCCAAGTCGCAGAACGTGGATGCGAGAAGCGCGTCACCGCAGAAGACACGAGTTCTCTATTACGATATAAAGCACGCCGCGGACATGGTTAAACAGAATACATTGGACAGCATGAAACACGCGATGGCCGGCAAGGTAGTCGTCGGTGGGCCGGACTTTCGATCGCCGTCGCCAAACACGGGAAGCGCAAAGCCGCAGGCGGAATTTTTACAACCGTCGAGTGGTCCGGCGCCCAACTACGTCAGTGTCACGGAGGACGGTAGGACTGCATGCGGGATTTGCAACAAGGTGTTCAGCAAGCCTAGTCAGTTACGGTTGCACCtcaatattcattattttgaGCGGCCGTACAGATGCGACCATTGTGCAGTTTCTTTCCGAACTAAAGGCCACTTGACGAAGCACGAGAGATCCGTTTCCCACCATAATAAGGTCAGTATGACGTCTACGTTTGGCGCGGCGACTACCAGCAACCCTAGGCCTTTCAAGTGTACAGACTGCAAGGTGGCGTTCAGAATACATGGACATTTGGCCAAGCATCTACGCAGCAAGATGCACATCATGAAGTTGGAATGCCTGGGCAAACTTCCGTTTGGAACGTATGCGGAGATGGAGAGATCTGGCGTCAACTTGAATGATATCGACACTACGGACTGTGATAATAGTCTTAATAGTCTGCAGATACTGGCTCAAAAACTAGGCGACAAGGATCCAGCGAAGGTCGCGCAGTGGGACTCGGAGGCTCTGCCCGGGCCGGTCGTGAGCGGCAGCGAGACCTCGTCGGACGAGGGCGAGCCTATACCGCAGCACGCGCTCCACGCGCAATACGCGAAGGCGACCACAGACGTGGACGTTCCCCGACCATATCACATGTCGCTCGTCCCCGAGAAACCGAAGGCCATCGGCGATGCTCGCCTGCGCAGCCCTCAGTTTAATCAGCAGAGACGCGACTACGTCGTCAAGGAGCAGCGACCGATCCCGCTGGTCGTCCCGGCGGAGGACGCGAGGGCGGAGGACAGTTTACAATCGTACAAGTGCCAAGTTTGCCCCGTATCTATGCGTACTCTAAACGAGTTGCAGGTACACTGTTTTGTTGAACATAGTATTGAGACGGATTCTAGTACAAATATTCACGGCGACAGGAGTGCGGGTAAATGTAGCAGGGAAAAAGAGAATACTCAGAAAAGAATTATGGAGGAGTCCGCGGTGAAGGAAGACCACAAAAGACAGAGGATAGAGGATACATAG
- Protein Sequence
- MTTETHTVAMTDPQLTNNNNNNNNNNNNNDGEPKYLHKKFKKMATTEVAPKVVEKEGTANNVASDETPKRKDDAKDGKESSKELGGKLEPSPEPAGGVEPAAESRKSGYACPYCPMTWTKPSVLQKHIRAHTNERPYPCALCGISFKTKSNLYKHCRSRSHVHKMEKGEKVSEDSDISLSDSASNGTGTPPPPPASTPTTATTTVSTAAVKTVKTGKIYKPKFQARTALQCVNSDTETSSLSPSSSNSSSLSSSTTTSNSVKPNAEQLQEHIDKIITDNQAIVDAVDPCLHKLMHRQQSLVETKQSFEQQPLNLSSAEESLNVRKRCYSDSCAQEAKDNELPESSIIKDLLLKTRGSMNGPILETAVENFVCPTCNIPYTSIDNLEAHRRYYCKGIDSSRKGADYHTDLEKRDSDFDVKSSDYYSTLQPLPSPGPLLGNTRLVDAYAPPAKKQRTESVPTSLRSLEELSKYPRPNSLQMFGGEVRILDNTGEVTKTMRIEPRQTNSPTSEHVVNSKCMNSETASIVVKSGLHSGGTMMHKPPGTSANTSNSSISLPNAPKILAPIIPNISTPNIAPTMSCYDYLESHLNPLTSITAYNPLTLPQAGITSILHGGKVIPYVPGMPGPHTLTGTPTIDISPSITTGEAGFKVIPGLPGLHMITQPLDLASPVKVQPSTVPGMPSPLSGHVPPMLDQPLDLASPAKEPMKISFKTPNGDGLKSGLTSPKVPSVKVETSTDKYRTRVPSTLTGGETGKAELDRHIKNNTTVKYKSIESPRERKDFAYDKSPKLDKAFSYPNGVDPTISSNSYSKMRYSPKTVLESRKRSSNWGVSEMDAGRAAPVDTAIPKYDLPPHENGRLKNSVSSDARGWMKVADGYGAFNGAKMKADNAPSVILVNLDSSKTEVPTKTSVELIVKDKQPEAKSPKSDVAKETTSANKFLRPTSLPLKPGTFTPKKHHGITPTANTLPLISPETPRPKKSYGQLYLNGHAYTYLGLKCSTRVFYCTLNRPQPMYVTQQHGLSMYSNWKICKEAPPDVDMAHYDSRNRPLNFTTAWKKQEDILTHSSYRPTTPSSPDSGLDSDMQEKTKRVKIFDGGFESNEDYTYVRGRGRGRYVCEECGIRCKKPSMLKKHIRTHTDVRPYTCKHCTFSFKTKGNLTKHMKSKAHYKKCVELGVVPVPTTVCDENIDKDAIARLAAGGGNTEESSEEEEETDGEESDESGSEEQEAAQSLLSLSQRNTSSRLPGLLPSGRPTTYPYTLTIPTTSAVSVASTTATTSTVSQSVTTQGTALIQSELSHRYYFPSNRSATEETRISVIQSSKKDDSDFEIEEITDVAESRHQLSQPMDLTTKQTTQVLPSPVPHRARPVDILTPVSEPVLLQTIVQTMERLPIQGREWKPDAEGHMLQAYLTERHVMDSKIKQQYRVGSTKDNKQIQERDVYPRHQDPSRPRHVESNGTPTVTYTDPSKMQHTVSESTIKYITKLSEDIKMEIREKIYQNNMTMERRTFDYEAIHKSKEQTNRMVSDRENFELGLTNGPAGARPSIEYGLPMARNGGSIERPNCSIVPIRSTSRIDCHSPKCLNMDVNNRPPLMQHANNDIDRSSMFNAMKMVSEMERPRECHPVGQEMRSASHEMRPAANDVRMQNHSPRNLDLRPPSREIRTPGQEYRAQSQELRLPSQQEYKIRGQDIRPPSREYKPAFAHDMQVIQELMPSTNMEIRQTNPDNRPPSRDMRGLAEYRAHAQDPRASYEMLQPIHEPPKSQNVDARSASPQKTRVLYYDIKHAADMVKQNTLDSMKHAMAGKVVVGGPDFRSPSPNTGSAKPQAEFLQPSSGPAPNYVSVTEDGRTACGICNKVFSKPSQLRLHLNIHYFERPYRCDHCAVSFRTKGHLTKHERSVSHHNKVSMTSTFGAATTSNPRPFKCTDCKVAFRIHGHLAKHLRSKMHIMKLECLGKLPFGTYAEMERSGVNLNDIDTTDCDNSLNSLQILAQKLGDKDPAKVAQWDSEALPGPVVSGSETSSDEGEPIPQHALHAQYAKATTDVDVPRPYHMSLVPEKPKAIGDARLRSPQFNQQRRDYVVKEQRPIPLVVPAEDARAEDSLQSYKCQVCPVSMRTLNELQVHCFVEHSIETDSSTNIHGDRSAGKCSREKENTQKRIMEESAVKEDHKRQRIEDT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00015593;
- 90% Identity
- iTF_00014945;
- 80% Identity
- -