Basic Information

Insect: Pogonomyrmex californicus
Gene Symbol: HIVEP1
Assembly: GCA_017141365.1
Location: JAEVLP010004539.1:63352-72901[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.002 0.3 12.5 0.0 1 23 111 133 111 133 0.97

2 9 0.0086 1.3 10.5 2.4 1 21 139 159 139 163 0.86

3 9 0.0038 0.56 11.7 0.0 1 21 374 394 374 395 0.96

4 9 1.6e-06 0.00024 22.3 1.6 1 23 1111 1133 1111 1133 0.99

5 9 7.1e-06 0.0011 20.2 5.2 1 23 1139 1163 1139 1163 0.92

6 9 5.7e-06 0.00085 20.5 0.3 2 23 1849 1870 1848 1870 0.97

7 9 0.00024 0.036 15.4 1.9 1 23 1876 1900 1876 1900 0.92

8 9 0.0024 0.36 12.3 3.2 1 23 1921 1945 1921 1945 0.93

9 9 2 3e+02 3.1 0.6 1 19 2103 2121 2103 2126 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.002	0.3	12.5	0.0	1	23	111	133	111	133	0.97
2	9	0.0086	1.3	10.5	2.4	1	21	139	159	139	163	0.86
3	9	0.0038	0.56	11.7	0.0	1	21	374	394	374	395	0.96
4	9	1.6e-06	0.00024	22.3	1.6	1	23	1111	1133	1111	1133	0.99
5	9	7.1e-06	0.0011	20.2	5.2	1	23	1139	1163	1139	1163	0.92
6	9	5.7e-06	0.00085	20.5	0.3	2	23	1849	1870	1848	1870	0.97
7	9	0.00024	0.036	15.4	1.9	1	23	1876	1900	1876	1900	0.92
8	9	0.0024	0.36	12.3	3.2	1	23	1921	1945	1921	1945	0.93
9	9	2	3e+02	3.1	0.6	1	19	2103	2121	2103	2126	0.92

Sequence Information

Coding Sequence: ATGACCGCTGAGACCCACACTGTGGCGATGACAGACCCACAGCTGACCAACAATAATAACAACAATAACAACAACAACAACAACGATGGCGAACCAAAGTACCTGCACAAGAAGTTCAAGAAGATGGCGACGACCGAAGTTGCGCCGAAAGTCGTCGAGCCTCCCAAGAAAGAGGGCACGACGAACAACGTCGTTTCTGACGAGATACCCAAGCAGAAGGATGCGGACAAGGATGGCAAGGAGCCGTCGAAGGAATCCGGCAATAAACTCGAGCCTTCCTCGGAATCAGCGGGAGGAGTTGAGCCTGCTACCGAATCCCGGAAGGCTGGCTACGCGTGTCCTTACTGCCCGATGACGTGGACCAAGCCGAGTGTCCTTCAAAAACACATTAGGGCGCACACAAACGAACGGCCGTATCCGTGTGTGCCCTGTGGAATCTCCTTCAAGACCAAGTCGAATCTGTACAAACACTGCAGGTCGCGCTCTCATGCACATAAAACGGAGAAAGGAGAAAAGGTGTCCGAGGATTCTGACATAAGTCTGTCGGATAGCGCCAGTAATGGCACTGGTACACCACCGCCGCCTCCGGCTTCAACGCCCACGACGGCAACGACGACGATACCCACCGTCGCGTTGAAGACTGTGAAGACTGGCAAGATCTATAAACCGAAATTTCAAGCCCGAACAGCCCTGCAATGCGTGAACAGCGACACCGAAACGTCTTCCTTATCGCCCAATTCTTCCAACAGCTCCTCCTCGTCTTCCTCCACAATCACCTCCACTTCCAATTCTGTCAAACCGAACGCGGAACGGTTACAGGAACACATCGACAAGATCATCACGGACAATCAGGCGATCGTCGACGCGGTGGATCCATGCTTGCACAAATTGATGCATCGTCAGCAAAGCCTGGTGGAAACAAAGCAGTCATTCGAACAGCAGCCGTTGAATTTATCTTCCGTGGAGGAGTCTTCGGATAGTAGAAAACGTTGTTACAGCGATAGTTGTGTTCAGGAAGCGAAAGATGGTGAACATCCCGAGAGTTCGATCATCAAGGATCTCCTTTTGAAAACTCGCGGCTCGGTAAACGGAGCGATACCGGAGACGGCCGTGGAGAATTTTGTCTGTCCCACTTGCAACATACCCTACACTAGCATAGATACACTAGAGGCTCATCGTAGATACTATTGTAAGGGTATTGATAGTCCTCGAAAAGGAGCCGATTATCATGCGGAATTAGAGAAGCGGGATTCCGATTTCGACGTGAAGTCTTCCGATTATTACAGCACCTTGCAGCCGTTGCCTTCGCCGGGTCCTTTATTAGGTAATACCAGACTAGTCGATGCGTACGCTCCACCTGCTAAGAAGCAAAGAACGGAATCTGTACCAACCAGTTTGAGGTCGTTGGAAGAGCTTAGCAAATACCCGCGTCCGAATTCGCTGCAGATGTTCGGCGGCGAAGTGAGAATCCTCGATAACACGGGCGAGGTGACGAAAACAATGAGAATCGAACCGCGACAGACGAACTCGCCCACGAGTGAACACGTAGTTAATAGCAAGTGCATGAATTCGGAAACGGCGTCGATAGTAGTGAAATCGGGACTTCATTCCGGCGGTACCATGATGCATAAACCACCGGGTACGTCAGCCAGCACGTCTAATTCCTCCATATCTCTACCCAACACGCCGAAAATGTTGGCACCCATCATACCGAACATATCAACCCCGAATATAGCGCCCACATTGTCCTGCTACGATTATTTAGAGTCACACATTAATCCACTGACGAGCATCACTGCCTACAATCCGTTGACTCTGCCGCAGGCTGGTATCACGAGTATCCTGCACGGCGGGAAAGTGATACCTTATGTACCTGGTATGCCCGGACCGCATACTCTAACAGGTACGCCGACTATAGACATATCTCCGAGTATAACGGCCGGCGAAGCGGGTTACAAGGTGATACCGGGACTACCGGGTTTGCACATGATACCTCAACCGTTGGATTTGGCTAGTCCGGTGAAGGTACAGTCCAGCACGATGCCTGGCATGCCCAGCCCAATGTCTGGACACGTTCCTTCCATCCTGGATCAGCCTTTGGATTTGGTCAGTCCGGCGAAGGAATCGATGAAAATCGGCTTCAAGACACCCAATGGCGACAGTTTAAAGAGCGGCTTGACCAGTCCCAAAGTTCCTAGCGTCAAGGTTGAGACCTCGACGGACAAGTATCGCGCGAGACTGTCGGAGCTCGATCGTCATATCAAAAATAATACGGCCGTAAAGTACAAGGGCATGGAGAGCCCGCGCGAGAGGAAAGAGTTCACGTATGACAAGAGTCCGAAGTTGGATAATACTTTTAATTATCCGAACGGTGTAGAACCTGCGATTTCTTCGAGCTCTTACAGCAAAATGAGATACTCGCCCAAGACCACTTCGGAAAGCAGGAAGAAATCAAATTGGGGCGTCAGTGAGGTAGATGCTGGCAGAGCTGCACCGATAGATACGCAAACCGCAATCTCCAAGTACGACCTATCTCCTCATGAGAACGGACGATTAAAGAGTAATGTCCCTTCGGATGCACGCGGATGGATTAAGGTCGCGGACGGATACGGTGCGTTCAACGGTGTCAAAACGAAGGCCGATAGCGCGCCGTCAGTGATACTTGTGAACTTAGATTCTTCCAAGACAGAAGTGCCAACGAAAACTTCCGTAGAATTAATTGTTAAGGACAAGCAACCCGAGGCCAAGTCGCCGAAGAATAGCGGCGAGACCGCTAAAGAAGCGACCGCGACTAACTCTAACAAATTCTTGAGACCTACGTCTTTGCCGCTGAAGCCCGGCACGTTTACGCCGAAGAAGCATCACGGGATCACGCCTACGGCGAACACGCTTCCTCTCATCAGTCCGGAAACTCCACGACCTAAAAAGTCGTATGGACAACTATATTTAAATGGGCATGCCTACACATATCTGGGACTCAAGTGTTCCACTAGGGTGTTTTACTGTACCCTGAATCGACCGCAGCCGATGTATGTCACACAGCAGCATGGTCTGTCGATGTACTCCAACTGGAAGATATGTAAGGAGGCTCCGCCGGACGTGGACATGGCGCACTACGATTCTCGGCATAGACCTCTGAATTACACGACCGCGTGGAAGAAGCAAGAGGACATCCTGACGCATTCCTCACAAAGACCAACTACTCCCACTAGTCCGGATAGCGGATTGGAGGGTGACATGCAGGAAAAGACGAAGAGGGTGAAGATATTTGACGGAGGCTACGAGAGCAACGAGGATTATACTTATGTGCGCGGAAGAGGTCGGGGGCGTTATGTCTGCGAAGAGTGTGGTATTCGTTGTAAAAAACCATCTATGCTGAAGAAACATATCAGAACACATACAGATGTTAGGCCATATACCTGTAAACATTGTACTTTTAGTTTCAAAACAAAGGGTAATCTTACAAAGCACATGAAGTCCAAGGCTCATTACAAGAAATGCATAGAACTAGGCGTGGTACCTGTTCCCACAACTGTCTGTGATGAGAACATTGATAAGGAGGCCATTGCGCGATTAGCTGCCGGTGGCAGCAACACGGAAGAATCCTCGGAGGAGGAGGAAGAGACCGACGGTGAGGAAAGCGAAGAATCTGGGAGCGAGGAACAAGAGGCGGCACAAAGTTTACTGAGTCTTTCGCAACGTAATACAATAAACAGATTGCCAGGCTTATTGCCATCGGGAAGACCTACGACGTATCCATACGTGCTAACTCTACCGACGACTTCCACGGTGAGCGTGACATCCACTGCCGCAACTACATCGGTTATAAGTAATCAAAACGTCACCACGCAAGGAACAGCTCTGATCCAAAATGAATTATCGCATCGCTATTACTTCCCATCGAACCGAAGTGCAACGGAAGAGACGAGGATCAGCGTCATTCAGTCATCGAAAAAAGATGACTCTGACTTCGAAATCGAAGAAATTACCGATACCACGGAGTCACGTCATCAGCTGTCGCAACCCATGGATCTCACGACGAAGCAGACCACTCAGGTGTTACCCTCGCCGGTCCCGCAAAGGGCTAGACCCGCGGACATTCTGACACCCGTCTCGGAGCCGGTCCTCTTGCAGACGATAGTCCAGACGATGGAACGGTTGCCTATTCAGGGTAGAGAATGGAAACCGGATGCAGAGGGCCACATGTTGCAGGCCTACCTCACGGAGAGACATGTGATGGACAGCAAAATTAAGCAGCAATATCGCGTGGGAAATACCAAAGTGGACAATAAGCAAATACAAGAAAGAGATGCTTACTCGCGTCATCAAGATCTTAATAGGCACGTAGAGTCTAACAGTATTCCGACAGTGACGTATACCGATCCTAGCAAGATGCAGCATACTGTTATGGAATCCAGGATTAAACACATGACGAAGCATACTAGTGATGACATCAAGATGGAAATCAGAGAAAAGATTTATCAGAACAATATGGCGATAGAGAGACGTTTGATTACGTTTGATTACGAGGCTATTCATAAGAATAAAGAACAAAGTCGTATAATTTCTGATCGTGAAAATTTCGAGCTTGGTTTAACTAATGGCTCTGCCAGCGCAAGATCGAATATCGAGTATGGTCTATCCATGACAAAAAATAATAATTCAATGGAAAGACCGAATTGTTCTATTGTACCTGTTCGCAGCACATCCAATATCGATTGTCATTCACCAAAATCTTTGAATATGGACGTCAATAATCGGCCACAGTTGCAACATACCCCTAACGACATTGACAGAAGTTCTGTATTCAACACGATAAAAATGATGAATGAAATAGAAAGATCTAGCCGTTGTATCAGTCAGGAGATGAAGTCTGTGAATCACGAAATAAGAACTTCGGCTAACGATGTTCGAATGCAGAGTCATAGTCCGCGAAATCTTGAATTAAGACCACCTAGTAGAGAGATCAGAACGCCTAGTCAAGAATACAGAACGCAAAGTCAAGAGCTGAGGCTACCAAGTCAACAGGAATACAAGATACGCGGTCAAGAGATGAGGCCACCTAGCTGCGAATACAAGTCGCATACATCGTTCCACGATATACAAATTATTCAGGAGCAAGCTGCTCAAGTTATACCGTCGGCAAACATGGAAATCCGACAGACAAATTCGGATAATAGGCCGCCGAGTCGTGACATGAGAGTTTACGCGGAATACAGAGCACACGCGCAAGATCCACGTGCCAATTACGATATATTACAGCCTATGCATGAGCCGCCCAAGTTGCAAAATATAGACGCAAGGAGCACGTCGCCCCAGAAAGTACGAATCCTCTATTACGATGCGAAACACACCGCGGACATGGTTAAACAGAATACATTAGATAACATGAAACACGCGGTAACCGGAAAAGTAGTCGTCGGTGGACCAGACTTTCGGTCGCCTTCACCAAACACAGGAAATGCGAAACCGCAAGCGGAATTTTTACAACCGTCAAGTGGACCTGCACCTAACTATGTCAGTGTCACAGAAGATGGTAGAAGTGTATGTGGAATTTGTAACAAGATGTTCAGTAAACCTAGTCAGTTACGGTTGCATCTCAACATTCATTACTTTGAGCGGCCATTCAGATGCGAAAATTGCGCAGTTTCCTTCCGGACTAAAGGTCACTTAACGAAACATGAAAGATCCGTTTCCCATCACAATAAGGTCAGTATGACTTCTACATTTGGTGCTGCGACTACTACCAATCCCAGGCCTTTCAAGTGCACAGATTGTAAGGTAGCGTTTAGAATACACGGACACTTGGCGAAGCATCTTCGCAGCAAGATGCACATTATGAAGTTAGAGTGCTTGGGCAAACTGCCGTTTGGAACGTATGCGGAGATGGAAAGATCAGGTGTCAACTTGAATGACATCGATACTTCGGACTGTGATAATAGTCTTAATAGTCTGCAGATGTTGGCTCAAAGATTATGCGAGAAAGATCCGGCAAAGATCGCGCAGTGGGAGTCAGAAGCTCTGCCCGGACCAGTCGTGAGTGGTAGCGAAACTTCGTCGGACGAGGGTGAGCCTATACCGCAGCATGCGCTCCGCGCGCAATACGTGAAAACGACGACGGATGCGAGCATCTCCCGACCATATCACGTGTCAATCGTCCCTGAGAAACCAAAAGCCATTAACGACGTGCGTCTTCGCAGCCCTCAGTTTAATCAGCAGAGACGCGATTACGCCGTTAAAGAGCAGCGACCGATCCCGACGGTCGTCTCAACAGAAGACGCGAGGGCGGAGGACAATTTACAATCGTACAAGTGCCAAGTTTGCCCCGTATCTATGCGTACTGTAAACGAGTTACAGGTACATTGTTTTGTTGAACATAATATTGAGATGGATCCTAGTACAAATATTCACGGAGATAGGAGTGCGGATAAGTGTAGCAGGGAAAAAGAGAATACTCAAAAAAGAATTATGGAGGAATCCGCAGTGAAAGAAGATCACAAAAGACAAAGGATAGAGGATACATAG
Protein Sequence: MTAETHTVAMTDPQLTNNNNNNNNNNNNDGEPKYLHKKFKKMATTEVAPKVVEPPKKEGTTNNVVSDEIPKQKDADKDGKEPSKESGNKLEPSSESAGGVEPATESRKAGYACPYCPMTWTKPSVLQKHIRAHTNERPYPCVPCGISFKTKSNLYKHCRSRSHAHKTEKGEKVSEDSDISLSDSASNGTGTPPPPPASTPTTATTTIPTVALKTVKTGKIYKPKFQARTALQCVNSDTETSSLSPNSSNSSSSSSSTITSTSNSVKPNAERLQEHIDKIITDNQAIVDAVDPCLHKLMHRQQSLVETKQSFEQQPLNLSSVEESSDSRKRCYSDSCVQEAKDGEHPESSIIKDLLLKTRGSVNGAIPETAVENFVCPTCNIPYTSIDTLEAHRRYYCKGIDSPRKGADYHAELEKRDSDFDVKSSDYYSTLQPLPSPGPLLGNTRLVDAYAPPAKKQRTESVPTSLRSLEELSKYPRPNSLQMFGGEVRILDNTGEVTKTMRIEPRQTNSPTSEHVVNSKCMNSETASIVVKSGLHSGGTMMHKPPGTSASTSNSSISLPNTPKMLAPIIPNISTPNIAPTLSCYDYLESHINPLTSITAYNPLTLPQAGITSILHGGKVIPYVPGMPGPHTLTGTPTIDISPSITAGEAGYKVIPGLPGLHMIPQPLDLASPVKVQSSTMPGMPSPMSGHVPSILDQPLDLVSPAKESMKIGFKTPNGDSLKSGLTSPKVPSVKVETSTDKYRARLSELDRHIKNNTAVKYKGMESPRERKEFTYDKSPKLDNTFNYPNGVEPAISSSSYSKMRYSPKTTSESRKKSNWGVSEVDAGRAAPIDTQTAISKYDLSPHENGRLKSNVPSDARGWIKVADGYGAFNGVKTKADSAPSVILVNLDSSKTEVPTKTSVELIVKDKQPEAKSPKNSGETAKEATATNSNKFLRPTSLPLKPGTFTPKKHHGITPTANTLPLISPETPRPKKSYGQLYLNGHAYTYLGLKCSTRVFYCTLNRPQPMYVTQQHGLSMYSNWKICKEAPPDVDMAHYDSRHRPLNYTTAWKKQEDILTHSSQRPTTPTSPDSGLEGDMQEKTKRVKIFDGGYESNEDYTYVRGRGRGRYVCEECGIRCKKPSMLKKHIRTHTDVRPYTCKHCTFSFKTKGNLTKHMKSKAHYKKCIELGVVPVPTTVCDENIDKEAIARLAAGGSNTEESSEEEEETDGEESEESGSEEQEAAQSLLSLSQRNTINRLPGLLPSGRPTTYPYVLTLPTTSTVSVTSTAATTSVISNQNVTTQGTALIQNELSHRYYFPSNRSATEETRISVIQSSKKDDSDFEIEEITDTTESRHQLSQPMDLTTKQTTQVLPSPVPQRARPADILTPVSEPVLLQTIVQTMERLPIQGREWKPDAEGHMLQAYLTERHVMDSKIKQQYRVGNTKVDNKQIQERDAYSRHQDLNRHVESNSIPTVTYTDPSKMQHTVMESRIKHMTKHTSDDIKMEIREKIYQNNMAIERRLITFDYEAIHKNKEQSRIISDRENFELGLTNGSASARSNIEYGLSMTKNNNSMERPNCSIVPVRSTSNIDCHSPKSLNMDVNNRPQLQHTPNDIDRSSVFNTIKMMNEIERSSRCISQEMKSVNHEIRTSANDVRMQSHSPRNLELRPPSREIRTPSQEYRTQSQELRLPSQQEYKIRGQEMRPPSCEYKSHTSFHDIQIIQEQAAQVIPSANMEIRQTNSDNRPPSRDMRVYAEYRAHAQDPRANYDILQPMHEPPKLQNIDARSTSPQKVRILYYDAKHTADMVKQNTLDNMKHAVTGKVVVGGPDFRSPSPNTGNAKPQAEFLQPSSGPAPNYVSVTEDGRSVCGICNKMFSKPSQLRLHLNIHYFERPFRCENCAVSFRTKGHLTKHERSVSHHNKVSMTSTFGAATTTNPRPFKCTDCKVAFRIHGHLAKHLRSKMHIMKLECLGKLPFGTYAEMERSGVNLNDIDTSDCDNSLNSLQMLAQRLCEKDPAKIAQWESEALPGPVVSGSETSSDEGEPIPQHALRAQYVKTTTDASISRPYHVSIVPEKPKAINDVRLRSPQFNQQRRDYAVKEQRPIPTVVSTEDARAEDNLQSYKCQVCPVSMRTVNELQVHCFVEHNIEMDPSTNIHGDRSADKCSREKENTQKRIMEESAVKEDHKRQRIEDT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00015593;
90% Identity: iTF_01228577;
80% Identity: -