Basic Information

Insect: Trachymyrmex cornetzi
Gene Symbol: HIVEP1
Assembly: GCA_001594075.1
Location: NW:144979-169903[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.014 0.98 9.5 0.1 1 23 108 130 108 130 0.97

2 9 0.0064 0.44 10.5 2.4 1 21 136 156 136 160 0.86

3 9 0.00068 0.047 13.6 0.0 1 21 370 390 370 391 0.96

4 9 1.2e-06 8.1e-05 22.3 1.6 1 23 1116 1138 1116 1138 0.99

5 9 5.3e-06 0.00036 20.2 5.2 1 23 1144 1168 1144 1168 0.92

6 9 2.6e-06 0.00018 21.2 0.2 2 23 1851 1872 1850 1872 0.97

7 9 9.1e-05 0.0063 16.4 1.9 1 23 1878 1902 1878 1902 0.92

8 9 0.0018 0.12 12.3 3.2 1 23 1923 1947 1923 1947 0.93

9 9 1.5 1e+02 3.1 0.6 1 19 2104 2122 2104 2127 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.014	0.98	9.5	0.1	1	23	108	130	108	130	0.97
2	9	0.0064	0.44	10.5	2.4	1	21	136	156	136	160	0.86
3	9	0.00068	0.047	13.6	0.0	1	21	370	390	370	391	0.96
4	9	1.2e-06	8.1e-05	22.3	1.6	1	23	1116	1138	1116	1138	0.99
5	9	5.3e-06	0.00036	20.2	5.2	1	23	1144	1168	1144	1168	0.92
6	9	2.6e-06	0.00018	21.2	0.2	2	23	1851	1872	1850	1872	0.97
7	9	9.1e-05	0.0063	16.4	1.9	1	23	1878	1902	1878	1902	0.92
8	9	0.0018	0.12	12.3	3.2	1	23	1923	1947	1923	1947	0.93
9	9	1.5	1e+02	3.1	0.6	1	19	2104	2122	2104	2127	0.92

Sequence Information

Coding Sequence: ATGACGACAGAGACCCATACTGTGGCGATGACAGACCCACAGCTGaccaataataataacaacaataacaacaacaacaacaacgaTGGCGAGCCAAAGTATCTACACAAGAAATTCAAGAAGATGGCGACGACCGAAGTTGCGCCGAAAGTCGTCGAGGAGGGCACGGCAAACAACGTCGTTTCTGACGAGGCACCGAAGCGAAAGGACGACAATAAGGACGGCAAGGAGTCGTCGAAGGAACTCGGCAACAAACTCGAACCTTCCCCGGAGCCGGCAGGGGGAGTCGAGCCCACCGTTGAGTCTCGAAAGAGCGGCAGCTACGCGTGCCCTTTCTGCTCGATGACGTGGACCAAGCCGAGTGTCCTTCAAAAGCACATCAGGGCGCACACAAACGAACGACCGTATCCGTGCGTGCCATGCGGAATTTCCTTCAAGACAAAATCAAATCTGTACAAGCACTGCAGGTCGCGCTCTCATGCACACAAGATGGAGAAAGGAGAGAAGGTATCCGAGGATTCCGACATAAGTCTGTCGGATAGCGCCAGTAATGGTACTGGTacaccaccgccgccgccagCTTCGACGCCCACAACGGCAACGACGACAGTATCCACTGCTGTAGTAAAGACCGTGAAAACCGGCAAGATCTACAAGCCAAAGTTTCAAGCCCGAACAGCATTGCAGTGCGTGAACAGTGACACCGAAACGTCTTCCTTATCGCCCAGTTCTTCCAACAGTTCCTGCTTGTCTTCCTCCACAACTACTTCCACTTCCAATTCTGTTAAACCTAAGGCGGAGCAGCTACAGGAGCATATCGACAAGATTATTACAGACAATCAGGCGATCGTCGATGCGGTGGATCCATGTCTGCACAAACTAATGCATCGCCAACAGAGCCTAGTCGAGACAAAACAGTCATTTGAACAGCAGCCGTTAAACTTGTCTTCCGCGGAGGAGACCTTGAACAACAGAAAGCGTTGTTACAGCGATAGTTGTGCTCAGGAAGCGAAAGATGAGCTTCCGGATAGCTCAATCATCAAGGATCTCCTTTTGAAAACTCGCGGTTCTATGAACGGACCGGTACCGGAGACTGCCGTAGAAAATTTCGTCTGCCCCACTTGTAACATCCCCTATACTAGCATAGACAATTTGGAGGCTCACCGCAGATATTACTGTAAAGGTATTGACAATTCTCGAAAAGGAACCGATTATCACGCGGACTTGGAAAAACGAGATTCTGATTTCGATGTAAAATCTGCCGATTATTATAGCACCTTGCAACCGTTACCCTCGCCGGGTCCTCTACTAGGTAACACTAGACTAGTCGACGCGTATGCTCCGCCTGCCAAGAAGCAAAGAACGGAAACTGTGCCGACCAGTTTAagatcgctggaggagctcagcAAATACCCGCGTCCAAACTCGTTGCAGATGTTCGGTGGTGAAGTGAGGATCCTCGACAACACGGGCGAAGTAACGAAAACGATGAGGATCGAGCCACGACAGACAAATTCGCCCACGAACGAGCACGTTGTCAATAGCAAGTGCATGAACTCGGAGACGGCGTCGATAGTGGTGAAATCGGGACTTCATTCTGGTGGTACCATGATGCATAAACCGCCGGGAACATCGGCTAGCACGTCCAATTCCTCCATATCTCTGCCCAACGCACCGAAGATATTGGCGCCCATTATACCAAACATATCAACCCCGAATATAGCGCCTACCATGTCCTGTTACGACTACTTGGAGTCACACCTCAACCCGCTGACGAGCATCACTGCCTACAATCCGTTGACTCTGCCGCAAGCTGGTATCACAAGTATCCTCCATGGCGGAAAGGTGATACCTTATGTACCTGGTATGCCCGGACCACATACTCTGACTGGTACGCCGACTATAGACATATCTCCGAGTATAACGGCTGGCGAAGCCGGTTATAAAGTGATACCGGGCCTACCGGGTCTACACATGATACCTCAGCCACTGGACCTGGCTAGTCCAGTCAAGGTACAGCCCAGTACGGTGCCTGGTATGCCCAGTCCGTTGTCTGGACATGTTCCTTCCTTGCTAGATCAGCCTCTGGATTTAGCTAGTCCGGCGAAGGAGTCGATGAAGATCAGTTTCAAGACACCTAATGGCGATAGTCTGAAGAGCGGCTTGACCAGTCCCAAAGTTCCTAACGTCAAGGTCGAAACTTCGACAGACAAGTATCGCACGAGGATGCCGTCAACTCTCACCGGTGGAGAGACCGGCAAAGCAGAGCTCGATCGTCATATCAAAAATAATACGGCCGTAAAATACAGGAGTATAGAGAGTCCGCGAGAGAGGAAGGATTTTACATATGACAAGAGTCCAAAGTTGGACAAGACTTTTAGTTATCCAAATGGCGTGGATCCCACAATTTCTTCAAACTCTTACAGCAAGATGAGATACTCGCCCAAGACCATTTCGGAAAACAAGAAGAGATCATCGAATTGGGGTGTCAGTGAAGTTGATGCTGGTAGAGCACTCCCGGTAGATACGCACACTGCAATCTCTAAGTTAGACCTACCTGTTCACGAGAACGGTCGATTAAAAAATAGTGTCTCTTCGGATACACGTGGATGGATTAAAGTCGCGGACGGATACGGCGCATTCAACGGCGCTAAGATGAAGGCCGACAACGCGTCATCGGTAATACTTGTAAACTTAGATTCTTCCAAGACAGAAGTGCCAACGAAAACTTCCGTAGAATTAATTGTTAAGGACAAACAACCCGAGGCCAAATCGCCGAAGAGCGGCGACGTCGTTAAAGAAACAACTAATGTTAATAAGTTCTTGAGACCCACGTCTCTACCGTTGAAACCTGGCACGTTTACACCGAAAAAGCATCACGGGATCACGCCTACGGCGAACACCCTTCCTCTCATCAGTCCGGAGACTCCGCGACCCAAGAAATCGTACGGACAACTATATCTAAATGGGCATGCTTACACATATCTAGGTCTTAAGTGTTCCACCAGGGTGTTTTATTGTACCTTGAATCGACCGCAGCCAATGTACGTCACACAGCAGCACGGTCTGTCGATGTACTCCAATTGGAAGATATGCAAGGAGGCACCACCAGATGTGGACATGGCACACTACGACTCTCGACATAGACCTCTCAATTACACGACCGCTTGGAAGAAACAAGAGGCTATTTTAACGCACTCTTCGCAAAGACCAACCACTCCCACCAGTCCGGACAGCGGATTGGAAAGTGACATGCAGGAGAAGACGAAAAGGGTGAAGATATTTGACGGAGGTTTTGAGAGTAACGAAGATTACACCTATGTGCGCGGAAGAGGACGAGGACGTTATGTCTGCGAAGAATGTGGTATTCGTTGTAAAAAACCATCTATGTTGAAGAAACATATCAGAACACATACGGATGTTAGGCCGTATACTTGCAAGCATTGTACTTTTAGTTTCAAAACAAAGGGTAATCTCACGAAACACATGAAGTCCAAGGCTCACTACAAAAAGTGTGTGGAATTAGGTGTAGTACCAGTTCCTACAACTGTCTGCGACGAAAATATCGACAAGGAGGCTATCGCGCGATTAGCTGCTGGTGGTGGTAACACAGAAGAATCCtcagaggaggaggaagaaagTGACGGAGACGAAAGCGAGGAATCGGGCAGCGAGGAGCAAGAAGCAGCACAAAGTCTACTCAGTCTTTCACAACGTAACACGTCGAATAGATTGCCAGGCTTGTTGCCGTCTGGTAGACCCACAACATATCCATACACGCTAACTTTACCGACAACTTCCACGATGAGCATCGCGTCCACTACCGCGGCTACGTCCACCATCAGTCAAAGTGTTACCACGCAAGAAACAACTTTGATCCAAAATGAATTATCGCATCGTTATTATTTCCCATCAAATCGAAATACGACGGAAGAAACGAGGATCAGTGTCATCCAATCGTCAAAGAAAGATGATTCTGACTTCGAGATCGAGGAAATCACCGAAGTCACGGAGTCACGTCATCAGCTGTCGCTGCCCATGGATCTCACGACGAAGCAGACCACTCAGGTGTTGCCCTCGCCGGTCCCGCAAAGGATTAGACACGCGGACATTCTGACACCCGTTTCGGAGCCGGTCTTATTGCAGACGATAGTCCAGACGATGGAACGGCTGCCTATACAGGGTAGAGAATGGAAACCGGATGCGGAGGGCCACATGTTGCAGGCCTACCTCACGGAGAGACATGTGATGGACAGCAAAATTAAGCAGCAGTATCGCGTGGGAAATACCAAGGACAATAAGCAGATACAGGAAAGAGATATTTACCCGCGTCATCAGGATCAAAATAGGTCCAGGCACATAGATTCCAACGGTATTCCGACGGTGACGTATACCGATCCTAGCAAGATGCAGCATACCGTTATGGAATCTAGGATTAAACAAACGACAAAGCATACCAGTGACGACATTAAGATGGAAATTAGGGAGAAGATTTATCAGAACAATATGGCAATGGAGAGACGAATATTCGATTACGAGGCTATTCACAAGAATAAAGAACAGACTAATCGTATGGTTTCTGATCGTGAAAATTTTGAGCTTGGTCTAACTAACGGTCCCGCTAGCACAAGACCAAGTATTGAGTATAGTCTAGCCATGACCAGGAACAATAGTTCGATCGAGAGACCGAACTGTTCTATTGTACCTGTTCGCAACACATCCAGTATTGATTGCCATTCACCGAAATCTTTAAATATAGACGTCAATAACCGACCACAATTGATGCAACATACAAACAACGACATTGACAGAAATTCCATGTTCAACGCGATGAAGATGGTGAGTGAAATGGAAAGATCTAGGGAATGCCATCCTGTTGGTCAGGAAGTAAGATCTGCTAATCACGAGATGAGAACCGCGACTAACGATATTCGAATGCAGAATCATAGTCCACGAAATCTCGATCTAAGGCCGTCTAGTAGAGAGATCAGAACGCCCGGTCAAGAGTACAGAACACAGAATCAGGAATTGAGGCTACCGAGTCAACAGGAGTACAAGATACGCGGTCAAGAGATGAGACCGCCTAGCCGTGAGTACAAACCGTCGTTCGCTCACGATATGCAAGTTATTCAGGAGCTTATGCCATCGGCAAACATGGAAATCCGGCAAGCAAATCCAGATAATAGACCGCCGAGTCGTGATATGAGAGCTCTCGCGGAATACAGAACGCACGCGCAAGATCCACGTGCCAATTACGAAATATTACAGCCTATACACGAACCACCCAAGTCGCAAAACGTAGACGCGAGAAGCACGTCACCGCAAAAAGTACGAATTCTTTATTATGATACGAAACACACTGCAGACATGGTTAAGCAGAATGCATTAGACAGCATGAAACACGCGGTAGCCGGAAAGATAGTCGTCGGTGGGTCAGATTTTCAATCGCCTTCACCAAACACAGTAAACGCGAAACCGCAAGCGGAATTTCTACAACCGTCCAGTGGACCCGCGCCTAACTATGTCAGTGTCACAGAAGATGGTAGGAGTGTATGTGGGATTTGTAATAAGGTGTTCAGTAAGCCTAGTCAGTTACGGCTACACCTCAACATCCATTATTTTGAGCGGCCATACAAATGCGAAAACTGTGCAGTTTCCTTCCGGACTAAAGGCCACTTGACGAAACACGAAAGATCCGTTTCCCATCACAATAAGgTCAGTATGACTTCTACGTTTGGTGCAGCGACTACTAGCAACCCCAGACCTTTCAAGTGTACAGATTGTAAGGTAGCATTCAGAATACATGGACATTTGGCCAAGCATCTTCGCAGCAAGATGCATATCATGAAATTAGAATGCTTGGGCAAACTGCCGTTTGGAACATATGCAGAGATGGAAAGGTCTGGCATCAACTTGAATGATATCGATACTACAGACTGTGATAATAGTCTTAATAGTCTGCAGATGTTGGCTCAAAGATTAGGCGAAAAGGACCCGGCAAAAATCGCGCAGTGGGACTCGGAAACTCTGCCCGGACCGGTCGTGAGTGGCAGTGAGACTTCGTCAGATGAGGGTGAGCCTATACCGCAGCACGCACTTCATGCAACATACGTGAAAGCGACAACGGACGCAGACATCTCTCGACCATATCACATGTCAATCGTCCCCGAGAAACCGAAAGCTATTAACGACGTTCGCCTCCGCAGTCCTCAGTTCAATCAGCATAGACGTGATTACTCCGTTAAAGAGCAGCGACCAATTTCGGCGGTCGTTCCGGAAGACGCAAGACTGGAGGACAGTTTACAATCGTACAAGTGCCAAGTTTGCCCCGTATCTATGCGTACTGTAAATGAGTTACAGGTACACTGTTTTGTTGAACATAATATTGAGACGGATTCTAGTACAAATATTCATGGAGATAGAAGTGCGGGTAAATGTAGGGAAAAAGAGAATACTCAAAAAAGAATTATGGAGGAATTCGTAGTGAAGGAAGATCACAAAAGACAAAGGATAGAGGATACATAG
Protein Sequence: MTTETHTVAMTDPQLTNNNNNNNNNNNNDGEPKYLHKKFKKMATTEVAPKVVEEGTANNVVSDEAPKRKDDNKDGKESSKELGNKLEPSPEPAGGVEPTVESRKSGSYACPFCSMTWTKPSVLQKHIRAHTNERPYPCVPCGISFKTKSNLYKHCRSRSHAHKMEKGEKVSEDSDISLSDSASNGTGTPPPPPASTPTTATTTVSTAVVKTVKTGKIYKPKFQARTALQCVNSDTETSSLSPSSSNSSCLSSSTTTSTSNSVKPKAEQLQEHIDKIITDNQAIVDAVDPCLHKLMHRQQSLVETKQSFEQQPLNLSSAEETLNNRKRCYSDSCAQEAKDELPDSSIIKDLLLKTRGSMNGPVPETAVENFVCPTCNIPYTSIDNLEAHRRYYCKGIDNSRKGTDYHADLEKRDSDFDVKSADYYSTLQPLPSPGPLLGNTRLVDAYAPPAKKQRTETVPTSLRSLEELSKYPRPNSLQMFGGEVRILDNTGEVTKTMRIEPRQTNSPTNEHVVNSKCMNSETASIVVKSGLHSGGTMMHKPPGTSASTSNSSISLPNAPKILAPIIPNISTPNIAPTMSCYDYLESHLNPLTSITAYNPLTLPQAGITSILHGGKVIPYVPGMPGPHTLTGTPTIDISPSITAGEAGYKVIPGLPGLHMIPQPLDLASPVKVQPSTVPGMPSPLSGHVPSLLDQPLDLASPAKESMKISFKTPNGDSLKSGLTSPKVPNVKVETSTDKYRTRMPSTLTGGETGKAELDRHIKNNTAVKYRSIESPRERKDFTYDKSPKLDKTFSYPNGVDPTISSNSYSKMRYSPKTISENKKRSSNWGVSEVDAGRALPVDTHTAISKLDLPVHENGRLKNSVSSDTRGWIKVADGYGAFNGAKMKADNASSVILVNLDSSKTEVPTKTSVELIVKDKQPEAKSPKSGDVVKETTNVNKFLRPTSLPLKPGTFTPKKHHGITPTANTLPLISPETPRPKKSYGQLYLNGHAYTYLGLKCSTRVFYCTLNRPQPMYVTQQHGLSMYSNWKICKEAPPDVDMAHYDSRHRPLNYTTAWKKQEAILTHSSQRPTTPTSPDSGLESDMQEKTKRVKIFDGGFESNEDYTYVRGRGRGRYVCEECGIRCKKPSMLKKHIRTHTDVRPYTCKHCTFSFKTKGNLTKHMKSKAHYKKCVELGVVPVPTTVCDENIDKEAIARLAAGGGNTEESSEEEEESDGDESEESGSEEQEAAQSLLSLSQRNTSNRLPGLLPSGRPTTYPYTLTLPTTSTMSIASTTAATSTISQSVTTQETTLIQNELSHRYYFPSNRNTTEETRISVIQSSKKDDSDFEIEEITEVTESRHQLSLPMDLTTKQTTQVLPSPVPQRIRHADILTPVSEPVLLQTIVQTMERLPIQGREWKPDAEGHMLQAYLTERHVMDSKIKQQYRVGNTKDNKQIQERDIYPRHQDQNRSRHIDSNGIPTVTYTDPSKMQHTVMESRIKQTTKHTSDDIKMEIREKIYQNNMAMERRIFDYEAIHKNKEQTNRMVSDRENFELGLTNGPASTRPSIEYSLAMTRNNSSIERPNCSIVPVRNTSSIDCHSPKSLNIDVNNRPQLMQHTNNDIDRNSMFNAMKMVSEMERSRECHPVGQEVRSANHEMRTATNDIRMQNHSPRNLDLRPSSREIRTPGQEYRTQNQELRLPSQQEYKIRGQEMRPPSREYKPSFAHDMQVIQELMPSANMEIRQANPDNRPPSRDMRALAEYRTHAQDPRANYEILQPIHEPPKSQNVDARSTSPQKVRILYYDTKHTADMVKQNALDSMKHAVAGKIVVGGSDFQSPSPNTVNAKPQAEFLQPSSGPAPNYVSVTEDGRSVCGICNKVFSKPSQLRLHLNIHYFERPYKCENCAVSFRTKGHLTKHERSVSHHNKVSMTSTFGAATTSNPRPFKCTDCKVAFRIHGHLAKHLRSKMHIMKLECLGKLPFGTYAEMERSGINLNDIDTTDCDNSLNSLQMLAQRLGEKDPAKIAQWDSETLPGPVVSGSETSSDEGEPIPQHALHATYVKATTDADISRPYHMSIVPEKPKAINDVRLRSPQFNQHRRDYSVKEQRPISAVVPEDARLEDSLQSYKCQVCPVSMRTVNELQVHCFVEHNIETDSSTNIHGDRSAGKCREKENTQKRIMEEFVVKEDHKRQRIEDT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00015593;
90% Identity: iTF_00014945;
80% Identity: -