Basic Information

Insect: Pogonomyrmex barbatus
Gene Symbol: HIVEP1
Assembly: GCA_000187915.1
Location: NW:69738-99318[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.0013 0.094 12.5 0.0 1 23 115 137 115 137 0.97

2 9 0.0057 0.4 10.5 2.4 1 21 143 163 143 167 0.86

3 9 0.0025 0.17 11.7 0.0 1 21 378 398 378 399 0.96

4 9 1e-06 7.3e-05 22.3 1.6 1 23 1116 1138 1116 1138 0.99

5 9 4.7e-06 0.00033 20.2 5.2 1 23 1144 1168 1144 1168 0.92

6 9 3.8e-06 0.00026 20.5 0.3 2 23 1854 1875 1853 1875 0.97

7 9 0.00016 0.011 15.4 1.9 1 23 1881 1905 1881 1905 0.92

8 9 0.0016 0.11 12.3 3.2 1 23 1926 1950 1926 1950 0.93

9 9 1.3 93 3.1 0.6 1 19 2108 2126 2108 2131 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.0013	0.094	12.5	0.0	1	23	115	137	115	137	0.97
2	9	0.0057	0.4	10.5	2.4	1	21	143	163	143	167	0.86
3	9	0.0025	0.17	11.7	0.0	1	21	378	398	378	399	0.96
4	9	1e-06	7.3e-05	22.3	1.6	1	23	1116	1138	1116	1138	0.99
5	9	4.7e-06	0.00033	20.2	5.2	1	23	1144	1168	1144	1168	0.92
6	9	3.8e-06	0.00026	20.5	0.3	2	23	1854	1875	1853	1875	0.97
7	9	0.00016	0.011	15.4	1.9	1	23	1881	1905	1881	1905	0.92
8	9	0.0016	0.11	12.3	3.2	1	23	1926	1950	1926	1950	0.93
9	9	1.3	93	3.1	0.6	1	19	2108	2126	2108	2131	0.92

Sequence Information

Coding Sequence: ATGACGACAGAGACCCACACTGTGGCGATGACAGACCCACAGCTGACcaacaataacaacaacaacaacaacaacaacaacgatGGCGAACCAAAGTACCTGCACAAGAAGTTCAAGAAGATGGCGACGACCGAAGTTGCGCCGAAAGTCGTCGAGCCTCCCAAGAAAGAGGGTACGACGAACAATGTCGTTTCTGATGAGATACCCAAGCAGAAGGATGCCAAGGATGACAAGGATGACAAGGATGGCAAGGAGCCGTCGAAGGAATCCGGCAATAAACTCGAGCCTTCCTCGGAATCAGCGGGAGGAGTTGAGCCCGCTACCGAATCCCGGAAGGCTGGCTACGCGTGTCCTTACTGCCCGATGACGTGGACCAAGCCGAGCGTCCTTCAAAAACACATTAGGGCGCACACAAACGAACGGCCCTATCCGTGTGTGCCCTGTGGAATCTCCTTCAAGACCAAGTCGAATCTGTACAAACACTGCAGGTCGCGCTCTCATGCACATAAAACGGAGAAAGGAGAAAAGGTGTCCGAGGATTCTGACATAAGTCTGTCGGATAGCGCCAGTAATGGCACTGGTACGCCACCGCCGCCTCCGGCTTCAACGCCCACGACGGCAACGACGACGATACCCACCGTCGCGTTGAAGACTGTGAAGACTGGCAAGATCTATAAACCGAAATTTCAAGCCCGAACAGCCCTGCAATGCGTGAACAGCGACACCGAAACGTCTTCCTTATCGCCCAATTCTTCCAACAGCTCCTCCTCGTCTTCCTCCACAATCACCTCCACTTCCAATTCTGTCAAGCCGAACGCGGAACGGTTACAGGAACACATCGACAAGATCATCACGGACAATCAGGCGATCGTCGACGCGGTGGATCCATGCTTGCACAAATTGATGCATCGTCAACAAAGCCTGGTGGAAACAAAGCAGTCATTCGAACAGCAGCCGTTGAATTTATCTTCCGTGGAGGAGTCTTCGGATAGTAGAAAACGTTGTTACAGCGATAGTTGTGTTCAGGAAGCGAAAGATGGTGAACATCCCGAGAGTTCGATCATCAAGGATCTCCTTTTGAAAACTCGCGGCTCGGTAAACGGAGCGATACCGGAGACGGCCGTGGAGAATTTTGTCTGTCCCACTTGCAACATACCCTACACTAGCATCGATACACTAGAGGCTCATCGTAGATACTATTGTAAGGGTATTGATAGTCCTCGAAAAGGAGCCGATTATCATGCGGAATTAGAGAAGCGGGATTCCGATTTCGACGTGAAGTCTTCCGATTATTACAGCACCTTGCAGCCGTTGCCTTCGCCGGGTCCTTTATTGGGTAATACCAGACTGGTCGATGCGTACGCTCCACCTGCTAAGAAGCAAAGAACGGAATCTGTACCAACCAGTTTGAGGTCGTTGGAAGAGCTTAGCAAATACCCGCGTCCGAATTCGCTGCAGATGTTCGGCGGCGAAGTGAGAATCCTCGATAACACGGGCGAGGTGACGAAAACAATGAGAATCGAACCGCGACAGACGAACTCGCCCACGAGTGAACACGTAGTTAATAGCAAGTGCATGAATTCGGAAACGGCGTCGATAGTAGTGAAATCGGGACTTCATTCCGGCGGTACCATGATGCATAAACCACCGGGTACGTCAGCCAGCACGTCTAATTCCTCCATATCTCTACCCAACACGCCGAAAATGTTGGCACCCATCATACCGAACATATCAACCCCGAATATAGCGCCCACATTGTCCTGCTACGATTATTTAGAGTCACACATTAATCCACTGACGAGCATCACTGCCTACAATCCGTTGACTCTGCCGCAGGCTGGTATCACGAGTATCCTGCACGGCGGGAAAGTGATACCTTATGTACCTGGTATGCCCGGACCGCATACCTTAACAGGTACGCCGACTATAGACATATCTCCGAGTATAACGGCCGGCGAAGCGGGTTACAAGGTGATACCGGGACTACCGGGTTTGCACATGATACCTCAACCGTTGGATTTGGCTAGTCCGGTGAAGGTACAGCCCAGCACGGTGCCTGGCATGCCCAGCCCAATGTCTGGACACGTTCCTTCCATCCTGGATCAGCCTTTGGATTTGGCCAGTCCGGCGAAGGAATCGATGAAAATCGGCTTCAAGACACCCAATGGCGACAGTTTAAAGAGCGGCTTGACCAGTCCCAAAGTTCCTAGCGTCAAGGTTGAGACCTCGACGGACAAGTATCGCGCGAGACTGTCGGAGCTCGATCgtcatatcaaaaataatacggCCGTAAAGTACAAGGGCATGGAGAGCCCGCGCGAGAGGAAAGAGTTCACGTATGACAAGAGTCCGAAGCTggataatacttttaattatccgAACGGTGTAGATCCTGCGATTTCTTCGAGCTCTTACAGCAAAATGAGATACTCGCCCAAGACCACTTCGGAAAGCAGGAAGAAATCAAATTGGGGCGTCAGTGAGGTAGATGCTGGCAGAGCTGCACCGATAGATACGCAAACCGCAAGTACGACCAAGTACGACCTATCTCCTCATGAGAACGGACGATTAAAGAGCAATGTCCCTTCGGATGCACGCGGATGGATTAAGGTCGCGGACGGATACGGTGCGTTCAACGGTGTCAAAACGAAGGCCGATAGCGCGCCGTCAGTGATACTTGTGAACTTAGATTCTTCCAAGACAGAAGTGCCAACGAAAACTTCCGTAGAATTAATTGTTAAGGACAAGCAACCCGAGGCCAAGTCGCCGAAGAATAGCGGCGAGACCGCTAAAGAAGCGACCGCGACTAACTCTAACAAATTTTTGAGACCTACGTCTTTGCCGCTGAAGCCCGGCACGTTTACGCCGAAGAAGCATCACGGGATCACGCCTACGGCGAACACGCTTCCTCTCATCAGTCCGGAAACTCCACGACCTAAAAAGTCGTATGGACAACTATATTTAAATGGACATGCCTACACATATCTGGGACTCAAGTGTTCCACTAGGGTATTTTATTGTACCCTGAATCGACCGCAGCCGATGTATGTCACACAGCAGCATGGTCTGTCGATGTACTCCAACTGGAAGATATGTAAGGAGGCTCCGCCGGACGTGGACATGGCGCACTACGATTCTCGGCATAGACCTCTGAATTACACGACCGCGTGGAAGAAGCAAGAGGACATCCTGACGCATTCCTCACAAAGACCAACTACTCCCACTAGTCCGGATAGCGGATTGGAGAGTGACATGCAGGAAAAGACGAAGAGGGTAAAGATATTTGACGGAGGCTACGAGAGCAACGAGGATTATACTTATGTGCGCGGAAGAGGTCGAGGGCGTTATGTCTGCGAAGAGTGTGGTATTCGTTGTAAAAAACCATCTATGCTGAAGAAACATATCAGAACACATACAGATGTTAGGCCATATACCTGTAAACATTGTACTTTTAGTTTCAAAACAAAGGGTAATCTTACAAAGCACATGAAGTCCAAGGCTCATTACAAGAAATGCATAGAACTAGGCGTGGTACCTGTTCCCACAACTGTCTGTGATGAGAATATTGATAAGGAGGCCATTGCGCGATTAGCTGCCGGTGGCAGCAACACGGAAGAATCctcggaggaggaggaagagaccGACGGTGAGGAAAGCGAAGAATCTGGGAGCGAGGAACAAGAGGCGGCACAAAGTTTACTGAGTCTTTCGCAACGTAATACAATAAACAGATTGCCAGGCTTATTGCCATCGGGAAGACCTACGACGTATCCATACGCGCTAACTCTACCGACGACTTCCACGGTGAGCGTGACATCCACTGCCGCAACTACATCGGTTATAAGTAATCAAAACGTCACCACGCAAGGAACAGCTCTGATCCAAAATGAATTATCGCATCGCTATTACTTCCCATCGAACCGAAGTGCAACGGAAGAGACGAGGATCAGCGTCATTCAGTCATCGAAAAAAGATGACTCTGACTTCGAAATCGAAGAAATTACCGATACCACGGAGTCACGTCATCAGCTGTCGCAACCCATGGATCTCACGACGAAGCAGACCACTCAGGTGTTACCCTCGCCGGTCCCGCAAAGGGCTAGACCCGCGGACATTCTGACACCCGTCTCGGAGCCGGTCCTCTTGCAGACGATAGTCCAGACGATGGAACGGTTGCCTATTCAGGGTAGAGAATGGAAACCGGATGCAGAGGGCCACATGTTGCAGGCCTACCTCACGGAGAGACATGTGATGGACAGCAAAATTAAGCAGCAATATCGCGTGGGAAATACCAAAGTGGACAATAAGCAAATACAAGAAAGAGATGTTTACTCGCGTCATCAAGATCTTAACAGGCACGTAGAGTCTAACAGTATTCCGACAGTGACGTATACCGATCCTAGCAAGATGCAGCATACTGTTATGGAATCCAGGATTAAACACATGACGAAGCATACTAGTGATGACATCAAGATGGAAATCAGAGAAAAGATTTATCAGAACAATATGGCGACAGAGAGACGTTTGATTACGTTTGATTATGAGGCTATTCATAAGAATAAAGAACAAAGTCGTATAATTTCTGATCGTGAAAATTTCGAGCTCGGTTTAACTAATGGCTCTGCCAGCGCAAGATCGAATATCGAGTATGGTCTATCCATgccaaaaaataataattcaatggaAAGACCGAATTGTTCTATTGTACCTGTTCGCAGCACATCCAATATCGATTGTCACTCACCAAAATCTTTGAATATGGACGTCAATAATCGGCCACAGTTGCAACATACCCCTAACGACATTGACAGAAGTTCTGTATTCAACacgataaaaatgatgaatgaaATAGAAAGATCTAGCCGTTGTATCAGTCAGGAGATGAAGTCTGTGAATCACGAAATAAGAACTTCGGCTAACGATGTTCGAATGCAGAGTCATAGTCCGCGAAATCTTGAATTAAGACCACCTAGTAGAGAGATCAGAACGCCTAGTCAAGAATACAGAACGCAAAGTCAAGAGGTGAGGCTACCAAGTCAACAGGAATACAAGATACGCGGTCAAGAGATGAGGCCACCTAGTTGCGAATACAAGTCGCATACATCGTTCCAcgatatacaaattattcagGAGCAAGCTGCTCAAGTTATACCGTCGGCAAATATGGAGATCCGACAAACAAATTCGGATAATAGGCCGCCGAGTCGTGACATGAGAGTTTACGCGGAATACAGAGCACACGCGCAAGATCCACGTGCCAATTACGATATATTACAGCCTATGCATGAGCCTCCCAAGTCGCAAAATATAGACGCAAGGAGCACGTCGCCCCAGAAAGTACGAATCCTCTATTACGATGCGAAACACACCGCGGACATGGTTAAACAGAATACATTAGATAACATGAAACACGCGGTAACCGGAAAAGTAGTCGTCGGTGGACCAGACTTTCGGTCGCCTTCACCAAACACAGGAAATGCGAAACCGCAAGCGGAATTTTTACAACCGTCAAGTGGACCTGCACCTAACTATGTCAGTGTCACAGAAGATGGTAGAAGTGTATGTGGAATTTGTAACAAGATGTTCAGTAAACCTAGTCAGTTACGGTTGCATCTCAACATTCATTACTTTGAGCGGCCATTCAGATGCGAAAATTGCGCAGTTTCCTTCCGGACTAAAGGTCACTTAACGAAACATGAAAGATCCGTTTCCCATCACAATAAGGTCAGTATGACTTCTACATTTGGTGCTGCGACTACTACCAATCCCAGGCCTTTCAAGTGCACAGATTGTAAGGTAGCGTTTAGAATACACGGACACTTGGCGAAGCATCTTCGCAGCAAGATGCACATTATGAAGTTAGAGTGCTTGGGCAAACTGCCGTTTGGAACGTATGCGGAGATGGAAAGATCAGGTGTCAACTTGAATGACATCGATACTTCGGACTGTGATAATAGTCTTAATAGTCTGCAGATGTTGGCTCAAAGATTATGCGAGAAAGATCCGGCAAAGATCGCGCAGTGGGAGTCAGAAGCTCTGCCCGGACCAGTCGTGAGTGGTAGCGAAACTTCGTCGGACGAGGGTGAGCCTATATCGCAGCATGCGCTCCGCGCGCAATACGTGAAAACGACGACGGATGCGAGCATCTCCCGACCATATCACGTGTCAATCGTCCCTGAGAAACCAAAAGCCATTAACGACGTGCGTCTTCGCAGTCCTCAGTTTAATCAGCAGAGACGCGATTACGCCGTTAAAGAGCAGCGACCGATCCCGACGGTCGTCTCAACAGAAGACGCGAGGGCGGAGGACAGTTTACAATCGTACAAGTGCCAAGTTTGCCCCGTATCTATGCGTACTGTAAACGAGTTACAGGTACATTGTTTTGTTGAACATAATATTGAGATGGATCCTAGTACAAATATTCACGGAGATAGGAGTGCGGGTAAGTGTAGCagggaaaaagagaatactcaaaaaagaattatagagGAATCCGCAGTGAAAGAAGATCACAAAAGACAAAGGATAGAGGATACATAG
Protein Sequence: MTTETHTVAMTDPQLTNNNNNNNNNNNDGEPKYLHKKFKKMATTEVAPKVVEPPKKEGTTNNVVSDEIPKQKDAKDDKDDKDGKEPSKESGNKLEPSSESAGGVEPATESRKAGYACPYCPMTWTKPSVLQKHIRAHTNERPYPCVPCGISFKTKSNLYKHCRSRSHAHKTEKGEKVSEDSDISLSDSASNGTGTPPPPPASTPTTATTTIPTVALKTVKTGKIYKPKFQARTALQCVNSDTETSSLSPNSSNSSSSSSSTITSTSNSVKPNAERLQEHIDKIITDNQAIVDAVDPCLHKLMHRQQSLVETKQSFEQQPLNLSSVEESSDSRKRCYSDSCVQEAKDGEHPESSIIKDLLLKTRGSVNGAIPETAVENFVCPTCNIPYTSIDTLEAHRRYYCKGIDSPRKGADYHAELEKRDSDFDVKSSDYYSTLQPLPSPGPLLGNTRLVDAYAPPAKKQRTESVPTSLRSLEELSKYPRPNSLQMFGGEVRILDNTGEVTKTMRIEPRQTNSPTSEHVVNSKCMNSETASIVVKSGLHSGGTMMHKPPGTSASTSNSSISLPNTPKMLAPIIPNISTPNIAPTLSCYDYLESHINPLTSITAYNPLTLPQAGITSILHGGKVIPYVPGMPGPHTLTGTPTIDISPSITAGEAGYKVIPGLPGLHMIPQPLDLASPVKVQPSTVPGMPSPMSGHVPSILDQPLDLASPAKESMKIGFKTPNGDSLKSGLTSPKVPSVKVETSTDKYRARLSELDRHIKNNTAVKYKGMESPRERKEFTYDKSPKLDNTFNYPNGVDPAISSSSYSKMRYSPKTTSESRKKSNWGVSEVDAGRAAPIDTQTASTTKYDLSPHENGRLKSNVPSDARGWIKVADGYGAFNGVKTKADSAPSVILVNLDSSKTEVPTKTSVELIVKDKQPEAKSPKNSGETAKEATATNSNKFLRPTSLPLKPGTFTPKKHHGITPTANTLPLISPETPRPKKSYGQLYLNGHAYTYLGLKCSTRVFYCTLNRPQPMYVTQQHGLSMYSNWKICKEAPPDVDMAHYDSRHRPLNYTTAWKKQEDILTHSSQRPTTPTSPDSGLESDMQEKTKRVKIFDGGYESNEDYTYVRGRGRGRYVCEECGIRCKKPSMLKKHIRTHTDVRPYTCKHCTFSFKTKGNLTKHMKSKAHYKKCIELGVVPVPTTVCDENIDKEAIARLAAGGSNTEESSEEEEETDGEESEESGSEEQEAAQSLLSLSQRNTINRLPGLLPSGRPTTYPYALTLPTTSTVSVTSTAATTSVISNQNVTTQGTALIQNELSHRYYFPSNRSATEETRISVIQSSKKDDSDFEIEEITDTTESRHQLSQPMDLTTKQTTQVLPSPVPQRARPADILTPVSEPVLLQTIVQTMERLPIQGREWKPDAEGHMLQAYLTERHVMDSKIKQQYRVGNTKVDNKQIQERDVYSRHQDLNRHVESNSIPTVTYTDPSKMQHTVMESRIKHMTKHTSDDIKMEIREKIYQNNMATERRLITFDYEAIHKNKEQSRIISDRENFELGLTNGSASARSNIEYGLSMPKNNNSMERPNCSIVPVRSTSNIDCHSPKSLNMDVNNRPQLQHTPNDIDRSSVFNTIKMMNEIERSSRCISQEMKSVNHEIRTSANDVRMQSHSPRNLELRPPSREIRTPSQEYRTQSQEVRLPSQQEYKIRGQEMRPPSCEYKSHTSFHDIQIIQEQAAQVIPSANMEIRQTNSDNRPPSRDMRVYAEYRAHAQDPRANYDILQPMHEPPKSQNIDARSTSPQKVRILYYDAKHTADMVKQNTLDNMKHAVTGKVVVGGPDFRSPSPNTGNAKPQAEFLQPSSGPAPNYVSVTEDGRSVCGICNKMFSKPSQLRLHLNIHYFERPFRCENCAVSFRTKGHLTKHERSVSHHNKVSMTSTFGAATTTNPRPFKCTDCKVAFRIHGHLAKHLRSKMHIMKLECLGKLPFGTYAEMERSGVNLNDIDTSDCDNSLNSLQMLAQRLCEKDPAKIAQWESEALPGPVVSGSETSSDEGEPISQHALRAQYVKTTTDASISRPYHVSIVPEKPKAINDVRLRSPQFNQQRRDYAVKEQRPIPTVVSTEDARAEDSLQSYKCQVCPVSMRTVNELQVHCFVEHNIEMDPSTNIHGDRSAGKCSREKENTQKRIIEESAVKEDHKRQRIEDT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00015593;
90% Identity: iTF_01229258;
80% Identity: -