Zkol016151.1
Basic Information
- Insect
- Zaprionus kolodkinae
- Gene Symbol
- Bro
- Assembly
- GCA_018901885.1
- Location
- JAEIFM010000414.1:249114-249770[+]
Transcription Factor Domain
- TF Family
- CBF
- Domain
- CBF_beta domain
- PFAM
- PF02312
- TF Group
- Beta-Scaffold Factors
- Description
- Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.7e-74 2.2e-70 235.5 3.1 1 153 39 187 39 198 0.95
Sequence Information
- Coding Sequence
- ATGCATCATCATCAAGGACTTGGAGACGCAGCCGCTTTGGCTGGCATGATGCCGCCCACCTACGAAACGATGGGCATGTACGCCGAGCCGCCTAAGCCACGTTTTATCTTTAAAATGCCACGTGTAGTGCCGGATCAGAAATCCAAATTCGAAAGCGACGAGCTCTTCCGCCGCCTCAGCCGGGAGAGTGAAGTACGGTATACGGGCTACAGGGAACGCGCCATCGATGAGCGTCGCATGCGATTTGTTAACGATTGTCGCAAGGGATACGCTGAGATCTCCTTCGTCGCGTCCGGCACTAATTTGCAGCTGTATTTCAATGCCAATCACAATCCCTACGTGCAGGAGCAGGAATGTGACTTCGAGAAGGAACGAAACAAGGTACACTTGCGTTCGAACTTTATTATGAACGGAGTTTGTGTGCGATTCCGTGGCTGGGTGGATTTGGATCGTTTGGATGGCGTTGCCTGTCTGGAATATGACGAGGTGCGTGCTCAGCAGGAAGATGCCCAGCTATGCGAGCAAATCGAAAACTATAACCAGCGTATGACCGACTCTAAGCGCATGTATACCCCTCCACAAGAAGTGATGCATCGTGGAGGCCCGGGTCCTGGAGCGATACCGTCTGCTATGCCAGGCCAACCGATGGGCTGGTAA
- Protein Sequence
- MHHHQGLGDAAALAGMMPPTYETMGMYAEPPKPRFIFKMPRVVPDQKSKFESDELFRRLSRESEVRYTGYRERAIDERRMRFVNDCRKGYAEISFVASGTNLQLYFNANHNPYVQEQECDFEKERNKVHLRSNFIMNGVCVRFRGWVDLDRLDGVACLEYDEVRAQQEDAQLCEQIENYNQRMTDSKRMYTPPQEVMHRGGPGPGAIPSAMPGQPMGW
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01552933; iTF_01558792; iTF_01550754; iTF_01548618; iTF_01557323; iTF_01556588; iTF_01550038; iTF_01552215; iTF_01558039; iTF_01551482; iTF_01555198; iTF_01559519; iTF_01553728; iTF_00537994; iTF_01570004; iTF_00805729; iTF_00587163; iTF_01320954; iTF_01326927; iTF_01549340;
- 90% Identity
- iTF_01552933;
- 80% Identity
- -