Zvit009927.1
Basic Information
- Insect
- Zaprionus vittiger
- Gene Symbol
- Bro
- Assembly
- GCA_018904025.1
- Location
- JAEIFQ010001142.1:1727612-1728283[-]
Transcription Factor Domain
- TF Family
- CBF
- Domain
- CBF_beta domain
- PFAM
- PF02312
- TF Group
- Beta-Scaffold Factors
- Description
- Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.6e-72 3.7e-68 228.2 0.2 1 157 43 192 43 202 0.94
Sequence Information
- Coding Sequence
- ATGCATCATCATCATCATCATCAAGGTGTTGGAGATGCCGCCGCCTTGGCTGGCATGTTGCCGCCGAACTACGATGCAATGGGCATGTACGCCGCTGATCCACCCAAGCCACGTTTCATCTTTAAGATGCCACGTGTAGTGCCGGATCAGAAGTCCAAATTCGAAAGTGATGAACTGTTCCGACGCCTAAGCCGCGAGAGTGAAGTGCGTTATACGGGCTACAGGGAGCGCGCCATTGATGAGCGTCGCATGCGTTTCATCAATGATTGTCGCAAGGGATACGCTGAATTGTCATTTGTTGCCTCCGGTACCAATGTGCAGCTCTATTTCAATGCCCAACCCAATCCCTATGCGGCGGAGCAGGATTGCGACTTCGAGAAGGAACGCAACAAGGTGCACCTGCGTTCCAGCTTCATTATGAACGGCGTGTGTGTGCGTTTCCGTGGCTGGTTGGACTTGGATCGCTTGGATGGCGTTGCCTGTTTGGAATACGATGAGCTGCGCGCACGGCAGGAGGATGCACAGCTGTGCGAGCAAATTGAGAGCCATAATCTGCGTATGAATGATGCTCAACGCATGTACACTCCACCACAGGAGCCACCTATGCACCACCATGCTGGTCCAGGAGCAGCTGCACCGGCTGCAATGCCTGGACATCCAATGGGCTGGTGA
- Protein Sequence
- MHHHHHHQGVGDAAALAGMLPPNYDAMGMYAADPPKPRFIFKMPRVVPDQKSKFESDELFRRLSRESEVRYTGYRERAIDERRMRFINDCRKGYAELSFVASGTNVQLYFNAQPNPYAAEQDCDFEKERNKVHLRSSFIMNGVCVRFRGWLDLDRLDGVACLEYDELRARQEDAQLCEQIESHNLRMNDAQRMYTPPQEPPMHHHAGPGAAAPAAMPGHPMGW
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01554447;
- 90% Identity
- iTF_01550754;
- 80% Identity
- -