Scyr004205.2
Basic Information
- Insect
- Scaptomyza cyrtandrae
- Gene Symbol
- Bro_1
- Assembly
- GCA_035044605.1
- Location
- JAWNNS010000473.1:2835342-2836019[+]
Transcription Factor Domain
- TF Family
- CBF
- Domain
- CBF_beta domain
- PFAM
- PF02312
- TF Group
- Beta-Scaffold Factors
- Description
- Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.1e-73 2.6e-69 232.2 0.9 1 153 48 196 48 207 0.95
Sequence Information
- Coding Sequence
- ATGGCCAGTATGAATTTACGCATCGAACTGTTAAGATCTGACAAaatgcatcatcatcaaaataTTGGAGATGCAGGCATAATGCCACCCTACGAAACAATGGCAATGTACGAACAACCCAAACCACGTTTCATATTCAAAATGCCGCGCGTTGTTCCTGATCAAAGATCCAAGTACGAGAGTGATGAGCTATTCCGTCGCCTTAGTCGGGAGAGTGAGGTTCGGTACACAGGCTATCGCGAACGAGCAATTAATGAGCGTCGGATGCGTTTTGTGACAGACTGCAGAAAAGGCTATGCTGAGCTCTCGTTTGTGGCATCAGGCACCAATGTCCAACTGTATTTTAATGTCAATCACAATCCCTACGCCCAGGAGCAGGAGTGCGATTTCGACAAAGATCGCGGCAAAGTTCACTTGCGCTCCAACTTCATTATGAACGGGGTCTGTGTGCGCTTTCGTGGCTGGTTAGATTTGGATCGACTGGATGGGGTTGCCTGTTTGGAGTACGATGAGGGTCGTGCTCTGCAGGAGGATGCACAGCTGTGtgaacaaattgaaaatcataATCAACGAATTAACGATTCAAAGCGTATGTATGCACAAACGCCACCCCAGGATATCATGCGACGTGGTCCTCCAGGTCCAGCTCCGGGACCACCAATGGGCTGGTTAAACTAG
- Protein Sequence
- MASMNLRIELLRSDKMHHHQNIGDAGIMPPYETMAMYEQPKPRFIFKMPRVVPDQRSKYESDELFRRLSRESEVRYTGYRERAINERRMRFVTDCRKGYAELSFVASGTNVQLYFNVNHNPYAQEQECDFDKDRGKVHLRSNFIMNGVCVRFRGWLDLDRLDGVACLEYDEGRALQEDAQLCEQIENHNQRINDSKRMYAQTPPQDIMRRGPPGPAPGPPMGWLN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01554447;
- 90% Identity
- iTF_01326155;
- 80% Identity
- -