Zcap000325.1
Basic Information
- Insect
- Zaprionus capensis
- Gene Symbol
- Bro
- Assembly
- GCA_018903675.1
- Location
- JAEIFN010001072.1:1595014-1595682[-]
Transcription Factor Domain
- TF Family
- CBF
- Domain
- CBF_beta domain
- PFAM
- PF02312
- TF Group
- Beta-Scaffold Factors
- Description
- Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4e-74 3.3e-70 234.9 0.5 1 158 42 192 42 202 0.94
Sequence Information
- Coding Sequence
- ATGCATCATCATCATCATCAAGGCCTTGGAGATGCTGCCGCCTTGGCTGGCATGTTGCCGCCCAACTACGATGCAATGGGCATGTACGCCGCTGAGCCACCCAAGCCACGTTTCATCTTTAAGATGCCACGTGTAGTGCCGGATCAGAAGTCCAAATTCGAAAGTGATGAACTGTTCCGCCGCCTGAGCCGAGAGAGTGAAGTGCGTTATACGGGATACAGGGAACGCGCCACCGATGAGCGTCGCATGCGTTTCATCAATGATTGTCGCAAAGGATACGCTGAAATCTCATTTGTGGCTTCCGGTACCAATCTGCAGCTCTATTTCAATGCCCAACCCAATCCCTATGCGCCGGAGCAGGATTGTGACTTTGAGAAAGAACGCAACAAGGTGCACCTGCGTTCCAGCTTCATTATGAACGGCGTGTGTGTGCGCTTCCGTGGCTGGTTGGACTTGGATCGCTTGGATGGCGTTGCCTGTTTGGAATACGATGAGCTGCGCGCACGGCAGGAGGATGCACAGCTGTGCGAGCAAATCGAGAGCCACAATCAGCGTATGAATGATGCCCAACGCATGTACACTCCACCACAGGAGCCAACTATGCACCAACGAGGTGGTCCAGGAGCAGATGCACCGGCTGCAATGCCTGGACATCCAATGGGCTGGTGA
- Protein Sequence
- MHHHHHQGLGDAAALAGMLPPNYDAMGMYAAEPPKPRFIFKMPRVVPDQKSKFESDELFRRLSRESEVRYTGYRERATDERRMRFINDCRKGYAEISFVASGTNLQLYFNAQPNPYAPEQDCDFEKERNKVHLRSSFIMNGVCVRFRGWLDLDRLDGVACLEYDELRARQEDAQLCEQIESHNQRMNDAQRMYTPPQEPTMHQRGGPGADAPAAMPGHPMGW
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01554447;
- 90% Identity
- iTF_01556588; iTF_01550038; iTF_01558039; iTF_01551482; iTF_01555198; iTF_01559519; iTF_01557323; iTF_01553728; iTF_01548618; iTF_01552215;
- 80% Identity
- -