Zorn014641.1
Basic Information
- Insect
- Zaprionus ornatus
- Gene Symbol
- Bro_1
- Assembly
- GCA_018904035.1
- Location
- JAEIFZ010000260.1:1510511-1511167[-]
Transcription Factor Domain
- TF Family
- CBF
- Domain
- CBF_beta domain
- PFAM
- PF02312
- TF Group
- Beta-Scaffold Factors
- Description
- Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.9e-71 2.5e-67 225.6 0.8 1 159 40 190 40 198 0.92
Sequence Information
- Coding Sequence
- ATGCACCATCATCAAGGTCTTGGAGATGCCGCCGCATTGGCCGGCATGTTGCCGCCCAACTACGATGCAATGGGCATGTACGCCGCCGAGCCACCCAAGCCACGTTTCATCTTTAAAATGCCTCGCGTAGTACCGGATCAGAAGTCCAAGTTCGAAAGTGATGAACTGTTCCGCCGCCTGAGCCGAGAATGTGAAGTGCGTTATACGGGCTACAGGGAACGCGCCATCGATGAGCGCCGCATGCGATTCATTAATGATTGTCGCAAGGGATACGCTGAAATCTCATTTGTTGCTTCCGGTACCAATCTTCAGCTTTATTTCAATGCCCAACCTAATCCCTATGCGGTGGAGCAAGAATGCGATTTCGAGAAGGAACGTAACAAGGTGCACCTGCGTTCAAGCTTCATTATGAACGGAGTGTGTGTGCGATTCCGTGGCTGGTTGGACTTGGATCGCTTGGATGGCGTTGCCTGTTTGGAATACGATGAGCTGCGTGCAAGGGAGGAGGATGCACAGCTTTGCGAGCAAATCGAAAGCCACAAGCGTATGAATGATGCCCAACGCATGTACACTCCACCACAGGAGGCAGTTATGCAGCGTGGTGGACCAGGAGGACCTGGACCGGCTGTTATGCCTGGACAGCCAATGGGCTGGTGA
- Protein Sequence
- MHHHQGLGDAAALAGMLPPNYDAMGMYAAEPPKPRFIFKMPRVVPDQKSKFESDELFRRLSRECEVRYTGYRERAIDERRMRFINDCRKGYAEISFVASGTNLQLYFNAQPNPYAVEQECDFEKERNKVHLRSSFIMNGVCVRFRGWLDLDRLDGVACLEYDELRAREEDAQLCEQIESHKRMNDAQRMYTPPQEAVMQRGGPGGPGPAVMPGQPMGW
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01554447;
- 90% Identity
- iTF_01550754;
- 80% Identity
- -