Xrho033044.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Xestia rhomboidea
Gene Symbol
egg
Assembly
GCA_963853795.1
Location
OY970785.1:3968981-4021151[-]

Transcription Factor Domain

TF Family
MBD
Domain
MBD domain
PFAM
PF01429
TF Group
Unclassified Structure
Description
The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.8e-13 2.9e-09 37.5 0.0 4 73 1864 1926 1861 1930 0.88

Sequence Information

Coding Sequence
ATGAGTGATACGGAAGAAAAGGACAATATAGAAAAAGAACTTGTGCGACCAAATCAAGACGGAGGTTCCAACAACCCAGAATCAATATCTGAGGGTAATGTACTATCTTTGGATTCGAATAAAAATACCGAAAATAGTAGCACCGTATCTGAAAATATGCCTCGATCAGCAGCTACAGAAGGCTCTGGAGATAATGCCGGCCGCATTGTTCAAGAAAACTCAGAACTTGATAAAATAGaatcagaattgactgaaatgTCAAAGGAGTTACAAAATACTGATGTAGGCATAGGTAGTGGTGATTATACAGCCAAAACAAAGGCCAGCGACATAGATGATAAAATAATCGAGGATATAAATACTGAAATTAATGCCAAAACCGATGTAATCGTGGAGAAAGATGGAAGTAATGATGATCTTCTTGCCAAATGTGATGACATAGAACTCAAAAAGGCTGATGAATTCGACGaatttgaagatgaagatatGCAACTAAGATGGGATGAGGATGATGATGCTAGCAATCAACTTGAGGGTGATGACAACACAAATGTTGCCGTTAAGAATGATGCTATTCTGTCAGAAGACAAACTTTTGGAAGATTCTGCTGATGTTTTAACTGAAAAAGGTAAACTTGAAAGTGTAACATTAAGAAACACTTCTAAAGAATCAGAAACTAGCCCAAAACTGGACATACATACAGACAAGGCTGATCTTGAAAAAAGCTTGGAAGATGAGCTTTTAGAAGAACCTGATGTTCATACTGAAGCAATAAAAAAGCCTGAAATGGTTTTTTCTGCAGAAGAAAAAATGGATAGTGATTTCctagaagaaaaaatacttgaagACTCTGAAATGAACAGCAATACAGAATTTATAGCTCAGACCAAAGAGATTATTGATGTGAAAAATATGAATGAACAGATAAAAAAGACTAAACCTGCAGAGAAACTAATAAAAGAAGATGAACTGACACATTCCACTGAAACATTACAAATGACATCTTCTAATGATGTTTTGTCAAAAGATATCCTTTTAGTAGAACCAGATCCTAAAGACGGAAGTTCTGAAATTATTCCTGAAAAAGATGCAGAAGGTTCTGATAACATTCCTGAAAAGGAATTCCCAATGAACAAAGAACTAGATGATGATGTTCTGCTAGAAGAAAAGCTCTTAGAAGAACCTGAAACAGCTGAAGTTATTCCTGAAAGTGATGTAACAATGGAagttgatgatgaaaatgaagcAGAGTTACTAAACGATGATGGTGGTCAAAACATTAGTAGTACTCTTATGGATGTTGATAGTACTGATCCATCTATTGAAGATCAAGTGAAGATAAAAGACAAGATTATAGATCAGCCAATGGATGATGAATCTGAAGTAGCTACGAAAGACATAGCTCAAACTAATCTAGAAAAGGTTGATATAAATCAAGCAACAGATGTAATTAAAGTAATGAATGGATCTGATGCACAATTACAAATGACTGAGAAGATCATTCATCAGCCGGTTGAAGATACAACTAAAACAATAGAGGTTATCAAAGATATACCTGTTGAAGAAAAATCTGCAACATTGGAATTTGATAAAGAGACAGCTATTGAAGATCAAGCTAAAATAGACAACCAAAATATTGATTTTGCTTCATCAGAGATGGACAATACAAATGAACCAATAAATGATGAGAAGAAAAGGGTTGAAAACAGCAAAGTTCAAttaattgtagaaacaaatacaaCAGAAGAGTCTATTAAGACTCCTGAACAATCAGACACACTCACTGTTTCTAATATTCctaatattgaaattaaagaaCAAGAGAAATCCATCCCAGCTAAATCTACActtgaaaaagaaattaaaagcaAAGAGGAGCAGGAGCAACCCAAATTAAATACAGAAACTGTACATGCAgacattaattttgaaaaacttgaaaaatctaAAGAAATTGCAGTACTAGACACAAGCTTAGACAAAAACAATGTGACTGCTGAACTTTCACCTAGTTCTTCAATATTCCGAGATAGTCTATCACCAATCAAAAGTTTCCATGGTTTAAATAAACCAGATGTAATGCTAGAAATACCTACTCAAGAATTAATAGACATGGATATGACAGATTTATCTATGAATCTAGACCAATCTGAAGTTTTAGACAGTAATGACAGagatcaaaatataaaaaaagagttAGAAGATGACAACACAATTGATATGTCTATAGTTGAGGATGAAACAGAAACAGAGAAATCAGTAGATAATGTTACTAAAGTTGTTGATGACACAGCAAACCAAAACGCAGTAGATCAAGATGCCATAGTTACTGAGACAAAAGCTGATAAAATTACTACTGAAAATGTAACAGCAAATGAGAAATCAGTAGATCAACAAACAACAGTAGCTGAGACATCAGTAGATGAAGTACCAATAGAAAGTAAAATCGAGAAAAGTggaaaaaaagaagaaactgtaGTTGAAGCAACTATTGAAGAAAATATGGAAATACTGTTTGCTAGTGTTGAATCGGAAGTAGCTAAACAAGTTCCTAAGTGCATTGCATCCACAAGCGAAACCCTGGAACAGCCATCGACATCCACCACACAAATGACTCTAGACACATCGGATGAGGTTCCTGACGCAGAGGTATCAGACAGTCTGGGGCTGTTGGCTGAGTCTACGCGGGTCATGGAAGATGACGAGGAAAACGAAgacgatgatgatggtgatgatgatgatgattttgatcagGATGAAAGCAGCAACCAAGTCTCAGCGGAACAATCGGAAGACTCGAATCCACCAGCCATAGAATCAGAACCAGTGACGGAGACGGAAGACAAGGACTTGGAGTCGCCAGCCCCTAAGGAAAGCGAATTTCCGTTCTTGCGTGATAGTTACTCCCAGGATAAGGGCGAGAAGGTGCATATGGAGTATGGAAcgATGGATTTACAGGCTGAAACAATAAATGACATGAATGAAGAGGCAACATCAGCTGTAGCGGCGTTGTTGAATGTTGACAACCCCGTCATTGAAGAAGCtaagGCCCCAAAAGAAACCCCAGAACAAATGGATATAGAAACAGTAAAACTGTCAGACACGTCCGACAATGAGGCTGACGTTGAACCTGCAGGAGGTTCAATGGTTGGAAAGACCGTGGCTGAAGCTGGATCTAGCAAGGAGGTTGAAAAAGAGCAAAAGAAATCACCATCGAAATCCCCACTTCAGAGCAATGCTTCCCCAAAGCAATCACCAAGCAAGCTGAAGAACTTAGCTATAACCGCGCAAGCAGCCAGATCCGTTGTTAATATTGTGGATCTGGAGGAGAGCAGCTCATCAGACGATGACATACAAGAAACGCAAGTCCAAAAACAACCATCACCGGAACAAGAGCCAAAAGACGACAAGCCTGCTTCCCCTGACCCGGACTCAGCAGTCACCAGCGTCAACATACCAACGGGCATAGATATAATACGTAGTGTGTCTTCTGGCGGAATTACCTCGGAGATAACAACTAGAGATGGGGAAGCTGTTATCAGCGGGGTACCTAAACCGCCGCCGCATAAGCCTgccAGATTGAATACGAGTGAAGTTTCGATCAAGACTGTTAGTTCCACCGAACCAATGGTTATACCTGAAACTAAGATAAATGAACAGACACCAACACAGTCTAAACCTAAACTGAGTCTAGAAATATTCAATCTAGATTCTGACGAAGAAGATAGTTCTGCTAAAGAAAATTCCACAACAAAACCCCCACACGAATTGACGCCCCTAGAACTAGAAAAAGCACGAGAAACATCGAAATGTATCAACTATAGTTGCACTAGCGACAACAAAGTGCTGTACAGGGTCGCAGAGGCAGCGGAGCTAGCGTACTACGACGCCAACAGGAAGAAACGCGCGCTGGTGTGCCAGCCGTGCGCTGCTGTCGTCGCTGACAGGACTAAGAATCTAATCCAAGGCATGAAGGACCTAACTCCTCTCTTAGACTTAGACATGCGCAAGTCATCACAGGAACTGGTGGAGATATCAGATTCTGATTCTGAAGACGAGAATATGAATTCTGAGGAGCCGAAGGAGATCATTGGGAAAGAGGGGGCTAAAATCTTAGAAGAAAGTCTAAGCCAGTTTTTGAACGACACTTGGAAGAAATACAAAATGGATGCACGGCTCAAAGAGACGCAGATCATGTTAGATGATGAAATCGAGAAACTTGAACAGGACAGCAAAGAAATCGACGAAATGCTGAGCGCATGTCAGGTGGCGACAGACAAGCTTCGCACGGAGTTGTACGCAACATTCGAGTGTCGCTTGCAACAACTACCGCCACTAGTCATACAAGACACGCCTGAGAAAAAAgTTCGTCATGCCAAGCGCCGTTTGTCGTCAAACACCAATGAGGTGCCTGCCAAACGTCCCGCTATACCGCTTGGATATGCTCCTCTAGATTCTGCAGACGCTAAGAAAGATATATCAGTAGTGAAGCTATCAGCGGAAGCGGCCCCGCCCGATCTCCCCCCTCCCGGCGAGATCTCCCGCCCCCCCTTGCGAGTGGGGATGACGGTGTTTGCCATGAAGAACGCCTTCGGACCGTTTTTCAAAGGCAAGGTGCTGGAGATACAGCCCAAAAATGCTGTTGGGggCAACCCATTTTCTCTATGCCGTGTGAGATTCGACCATAAAGCCAAGTCTAACGGAAAGGTGCTGCAAGGGAGGTCAATCGCTTATGCAGAGCCCGCTGACGTTAGGATGACTATTGGTACTCGTCTCATTGCTCTGTTCAAAGATTCGAATAAGCGCGAGTCTTACTATTCGGGCGTGGTCGCTGAAATACCCAACCCGGTCAATAATTACAGATACCTAGTATTTTTCGACGATGGCTACGCTCAATACGTACAGCATCAGTATACCCGCCTAGTTTGCGAGAGCTCCCAACATGTATGGGATGAAGTGCATTCACTCTCGCGGGATTTCGTGTTCAATTACCTGAAGGCGTACCCTGAAAGACCCATGGTCAGGCTACACACGGGGCAGCACCTAAAGACTGAGTGGAACGGAAAATGGTGGGCATCCCGGGTGCTCCGAGTGGACGCATCATTAGCTCAGGTGATGTTCGTGGAGGGCGGGCGGCGCGAGTGGATCTACCGTGGTTCAACACGACTCGCACCCTTGTACCTTGAGCTACAAGCCGCGGAAAGACACCGGCCCCGGCCATTGCCCCGGGGCAAGGCGCCGCCTAGGCTGAATATGCCATACGTGGAGTACATTCGGTCAGATGAGCAGGAATCCAGCAAGCCAAAAGACGTGCAGGTGCAGGCTCAGCAGGAAATGCAACAACAACAGCTGCAGCGAGATGAGGAGATTCGTCGCCAACGCGCCGTGGCCAAGAAGTCCACATCAGTGCCTCCTCAGGTGTACCCGCCGGCGCATCCGATCCCGCCGCCCGTTATTACAGATCCTGTCACCAGCAGAGTTGTGtACTATACACCAAAAAATGCAGTCAGGCCATTGAAGATGGTCCCGCATAGATGCACTCCTAAATGCAAGAGAAGCGACGTGCTTTCACTAAAGGAATTGAGGACTTACAACCCGCTGGCCAAACCACTACTTAGCGGATGGGAAAGACAAATAGTCCGCTTCAAGGGCCACAAGGACGTGATGTACCGAGCGCCGTGCGGGCGACGCATACGCAACATGCGCGAGCTACATCACTACTTACGTTCCATAGACAGCGACCTGCCTGTAGATCTCTTCGATTTCCATTACTCCACGCACTGTCTGGCTGAGTTCGTGTTGAACAAGTGTCTTGTGGGGAAAAAGGACCTTTCCCACGGCAAAGAGAACGTCCCGGTGCCGTGCGTGAACTACTACGACGACTCGCTCCCGGAGTTCTGTTCGTACAACACCGAGCGCACACCCACCGCCGGGGTTCCGCTCAACTTGGAGCCCGAGTTCCTGTGCGGCTGCGACTGTACCGACGATTGTCAGGATAAATCTAAATGCGCTTGCTGGAAGATGACGCTGGAGGGCGCTCGGACCATCGGCCTGGTCGGGCCCAATGTGGGCTATGCCTACAAACGATTGCCCGAACCGTTACCTTCTGGAATATATGAGTGTAATTCTAGGTGTAAATGCAAGCATACGTGTCTAAATCGCGTGGCGCAACATCCTCTACAATTGAAGTTGCAGGTATTCAAAACCCCTAACCGAGGTTGGGGTATCCGCGCACTGAACGACGTGCCCAAAGGATCCTTTCTCTGCGTGTACGCAGGTAACCTGCTCACCGATGCTACGGCTAACTTGGATGGTTTGAATGAGGGTGACGAATATTTAGCAGAACTGGATTACATAGAAGTTGTCGAACAAATGAAGGAAGGTTATGAGGAGGATATCCCTGAGGCCGACAAGAAATTAGTCAAGAAAGAATCAGGAAAGGATGGTGAAGAAAGTGATGAAGAGCCATCGTCATCATCTGAGGATGAGGACACCGCCTCCAAGACTGACAAGGAGGATGATGACTTTAAACCTGGGAGCATTGGACTTGGCCTGGGGGCTGGCGTTGCGGAGTTCAACAAACGCCTCCGTAAACGCgagaaatcaaagaaagataGAGAAAATGCGGCGGCTGacgataaagataaagatataacTAAAGATACAACAAAAGATATTAAAGAATCAAAGGAAGAAATGAAGGCTGAAGATGATTGTATTACCATTAGTGATGATGAAGAAGtACGAGAACCTTCGAGATTCATGGCTCAAACGAAAATGGGAGCAAACGAGTATATATCTAAATACAAATCTGTTCGCACACTTTTCGGTAAGGACGAGGCGTGCTATATCATGGACGCTAAGGTTCAAGGCAACATTGGAAGATATCTCAATCACTCCTGCTGTCCCAACGTGTTCGTACAGAACGTCTTTGTGGACACCCACGACCCTCGGTTCCCCTGGGTGGCTTTCTTCGCGCTATCTCACATAAAGGCCGGCACAGAGCTCACGTGGAACTACAACTATGACGTGGGTTCGGTTCCCGGCAAGATACTCTACTGTTATTGCGGCGCCGTCAATTGTAGAGGGCGacttttgtaa
Protein Sequence
MSDTEEKDNIEKELVRPNQDGGSNNPESISEGNVLSLDSNKNTENSSTVSENMPRSAATEGSGDNAGRIVQENSELDKIESELTEMSKELQNTDVGIGSGDYTAKTKASDIDDKIIEDINTEINAKTDVIVEKDGSNDDLLAKCDDIELKKADEFDEFEDEDMQLRWDEDDDASNQLEGDDNTNVAVKNDAILSEDKLLEDSADVLTEKGKLESVTLRNTSKESETSPKLDIHTDKADLEKSLEDELLEEPDVHTEAIKKPEMVFSAEEKMDSDFLEEKILEDSEMNSNTEFIAQTKEIIDVKNMNEQIKKTKPAEKLIKEDELTHSTETLQMTSSNDVLSKDILLVEPDPKDGSSEIIPEKDAEGSDNIPEKEFPMNKELDDDVLLEEKLLEEPETAEVIPESDVTMEVDDENEAELLNDDGGQNISSTLMDVDSTDPSIEDQVKIKDKIIDQPMDDESEVATKDIAQTNLEKVDINQATDVIKVMNGSDAQLQMTEKIIHQPVEDTTKTIEVIKDIPVEEKSATLEFDKETAIEDQAKIDNQNIDFASSEMDNTNEPINDEKKRVENSKVQLIVETNTTEESIKTPEQSDTLTVSNIPNIEIKEQEKSIPAKSTLEKEIKSKEEQEQPKLNTETVHADINFEKLEKSKEIAVLDTSLDKNNVTAELSPSSSIFRDSLSPIKSFHGLNKPDVMLEIPTQELIDMDMTDLSMNLDQSEVLDSNDRDQNIKKELEDDNTIDMSIVEDETETEKSVDNVTKVVDDTANQNAVDQDAIVTETKADKITTENVTANEKSVDQQTTVAETSVDEVPIESKIEKSGKKEETVVEATIEENMEILFASVESEVAKQVPKCIASTSETLEQPSTSTTQMTLDTSDEVPDAEVSDSLGLLAESTRVMEDDEENEDDDDGDDDDDFDQDESSNQVSAEQSEDSNPPAIESEPVTETEDKDLESPAPKESEFPFLRDSYSQDKGEKVHMEYGTMDLQAETINDMNEEATSAVAALLNVDNPVIEEAKAPKETPEQMDIETVKLSDTSDNEADVEPAGGSMVGKTVAEAGSSKEVEKEQKKSPSKSPLQSNASPKQSPSKLKNLAITAQAARSVVNIVDLEESSSSDDDIQETQVQKQPSPEQEPKDDKPASPDPDSAVTSVNIPTGIDIIRSVSSGGITSEITTRDGEAVISGVPKPPPHKPARLNTSEVSIKTVSSTEPMVIPETKINEQTPTQSKPKLSLEIFNLDSDEEDSSAKENSTTKPPHELTPLELEKARETSKCINYSCTSDNKVLYRVAEAAELAYYDANRKKRALVCQPCAAVVADRTKNLIQGMKDLTPLLDLDMRKSSQELVEISDSDSEDENMNSEEPKEIIGKEGAKILEESLSQFLNDTWKKYKMDARLKETQIMLDDEIEKLEQDSKEIDEMLSACQVATDKLRTELYATFECRLQQLPPLVIQDTPEKKVRHAKRRLSSNTNEVPAKRPAIPLGYAPLDSADAKKDISVVKLSAEAAPPDLPPPGEISRPPLRVGMTVFAMKNAFGPFFKGKVLEIQPKNAVGGNPFSLCRVRFDHKAKSNGKVLQGRSIAYAEPADVRMTIGTRLIALFKDSNKRESYYSGVVAEIPNPVNNYRYLVFFDDGYAQYVQHQYTRLVCESSQHVWDEVHSLSRDFVFNYLKAYPERPMVRLHTGQHLKTEWNGKWWASRVLRVDASLAQVMFVEGGRREWIYRGSTRLAPLYLELQAAERHRPRPLPRGKAPPRLNMPYVEYIRSDEQESSKPKDVQVQAQQEMQQQQLQRDEEIRRQRAVAKKSTSVPPQVYPPAHPIPPPVITDPVTSRVVYYTPKNAVRPLKMVPHRCTPKCKRSDVLSLKELRTYNPLAKPLLSGWERQIVRFKGHKDVMYRAPCGRRIRNMRELHHYLRSIDSDLPVDLFDFHYSTHCLAEFVLNKCLVGKKDLSHGKENVPVPCVNYYDDSLPEFCSYNTERTPTAGVPLNLEPEFLCGCDCTDDCQDKSKCACWKMTLEGARTIGLVGPNVGYAYKRLPEPLPSGIYECNSRCKCKHTCLNRVAQHPLQLKLQVFKTPNRGWGIRALNDVPKGSFLCVYAGNLLTDATANLDGLNEGDEYLAELDYIEVVEQMKEGYEEDIPEADKKLVKKESGKDGEESDEEPSSSSEDEDTASKTDKEDDDFKPGSIGLGLGAGVAEFNKRLRKREKSKKDRENAAADDKDKDITKDTTKDIKESKEEMKAEDDCITISDDEEVREPSRFMAQTKMGANEYISKYKSVRTLFGKDEACYIMDAKVQGNIGRYLNHSCCPNVFVQNVFVDTHDPRFPWVAFFALSHIKAGTELTWNYNYDVGSVPGKILYCYCGAVNCRGRLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01533958; iTF_00711889; iTF_00685466; iTF_01061916; iTF_01063787; iTF_01064689; iTF_00928730;
90% Identity
-
80% Identity
-