Lpor025595.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Lycophotia porphyrea
Gene Symbol
egg
Assembly
GCA_950005105.1
Location
OX465411.1:3541062-3585808[-]

Transcription Factor Domain

TF Family
MBD
Domain
MBD domain
PFAM
PF01429
TF Group
Unclassified Structure
Description
The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.5 1.1e+04 -3.2 0.1 28 38 1813 1833 1793 1834 0.62
2 2 3e-13 1.3e-09 38.2 0.0 4 73 1865 1927 1862 1931 0.88

Sequence Information

Coding Sequence
ATGAGTGCTAGGGAAGAAAATGACaatgaagaaaaagaaattcTACGAAAAAATCAAGGTTTCAACAACCCAGAAACATTAACTGAGAGTAATGTACTATCTTTGGATTCGAATAGAAATACCGGAATTAATAGCAATATATCTGAAAATGTGCATCGAACAGCAGCTATAGAAGGCTCTGGGGATAATGCCGGCCGCATTGTTCAAGAAGACTCGGAACTTGATAAAATAGAAGCAGAATTGAGTGAAATTTCAAAGGAGTTAACTGATGCAGGCATAGGTAGTGGTGATTATACAGCTAAAGCAACGGTAAGCGACATAgatgataaaataattgaggACATTAATATTGAAACATCTAAAACCGTTGTGGAGAAAGGTGGAAGTAATCATGATCATCTTGACAAATGTGATGATATAGAACTCAAAAAGGCTGATGATTTTGACGAATTTGAAGATGAAGATATGCAACTAAGGTgggatgaggatgatgatgctAGCAATCAACTTGAGGGTGATGACAATGCAAATGTTGGTAATAAGATTGATGGTATTCTGTCAGAAGACCAACTTTTAGAAGATACTTCTGATGTTTTAACTGGAAAAGGCAATCTTGAAAGTGTAACCGTAAGAGACACTTCTAAAGAATCAGAAACTAGTCCAAAACTGGACTTCCTTACAGACCAGGCTGATCTTGAAAAAAGCTTGGAAGAAGAGCTTTTAGAAGAACCTGATGTTAATACTGAAGCAATAAAAAACCCGGAAATGGTTTTTTCTGCAGAAGAAAAAATGGATCGAGATTTCCTAGAAGAGAAAATACTTGAAGACTCTGAAATGAACAGTCAAACAGAATTTATAGCTCAAGCCAAAGAGATTATTGACGTGGAAAGTACGAAtgaacagataaaaaaaattaaacctgcagagaaactaataaaaaaagatgaaCTGAAACATTTTACTGAAATATTACAAATGACATCTTCTAATAATGATGCTTTGTCAAAAGATAATCTTTTAGAAAAACCAGATTATAAGGACAAAAGTTCTGAAATTATTCCTGTGAAAGTCACAGAAAGTTCTGACAACATTCctggaaaaaaaaaggaataccCAATGAACAAAAAACTAGATGATGATGTTCTGCTAGAAGAAAAGCTCTTAGAAGAACCTGAAACAGCTGAAGTTATTCCTGAAAGTGATGTAACTATGGAAGTTGATGATGAAAATGAAGCAGAGTTACTAAAAGATGATGGAGGTCAAAACGATAGTAGTACTCCTATGGATGTTGATAGTACTGATCCATCTATTAAAGATCAAGCAAAGATAGACTCGATTATAGATCAGCCAATGGATGATGAATCTGAAGTAGGGAAGAAAGAGATAGCTCAAACTAATCTAGAAAAGGTTGATATAAATCAAACAACAGATGAAATCAAGGTAATGAATGAATCTGATTTGATTCATCAGCCAGTTGAAGATACAACCAAAACAATAGAAGTTATCAAAGATTTACCTGTTGAAGAAAAATCTGCAACAGTAGAATTTGATAAAGAGACAGCTATTGGGGATCAAGCTAAAATAGATAAGCAAAATATTGAATTAGCTGCATCAGAGATGGAAAATTTAAATCAACTAATGAATGATGAGAAGAAAATGGTTGAAAACAGCGAAGTTCAAATAATTgtagaaacaaataaaacagaagAGTCTAGCAAGACTCCTGAACAATCAAACACAGTCACTGTTTCTAATATTCCTAATATTCAAATTGAAGGACAAGAGAAATCTATCCCAGATAAATCTACGCTTGAAAAGGAAATTGAAAGCAAAGAGGAGCAAGagcaaactaaattaaatacacaAAGTGTACATGTAgacattaattttgaaaaacctGAAAAATCTAAAGAAATTGTTGAACTAGACACAAACTTAGACGAAAACAATGTGACTGCTGAAGTTTCACCTAGTTCTTCAATATTTCGAGATAGTCTGTCACCTATCAAAAGTTTCCATGGTTTAAATAAACCAGATGTAATGCTAGAAATACCTACTCAAGAACTAATAGACATGGATATGACAGATTTGTCTATGAATCTAGACCAATCTGAAGTTTTAGACAGTAATGACATAGATCAAAATGTAACAAAAGCTGAGAAAGATACAGAAACTGAGAAATCAGTAGATAATTTAACTAAAGTTGTTGATGACACAGCAAACCAAAACGCAGTAGATCAAGACTCCATTGTTACTGAAACAAAAGCTGATAAATTTACTGAAAATGTCACAGCAAATGAGGAATCAGTAGATCAACAAACCACAGTAACTGAAGCAACAGTAGATAAAGTACCAATAGTAATTCAAACTGTAGAAAGtggaaaaaaagaagaaactgTAGTTGAAGCAACTATTGAAGAAAATATGGAAATGCTGTTTGCTGATGTTGAACCGGAAGTTGCTAAAGAAGTTCCTGAGTGCATTGCATCCACAAGCGAAACCCTGGAACAGCCATCAACATCCACCACACAAATGGCTCCAGATACATCGGATGAGGTTCCAGATCAGGTATCAGACAGTCTGGGGCTGTTGGCTGAGTCTACGCGTGTCATGGAAGATGATGAGgaaaacgatgatgatgatgatggtgatgacgatgatgattttGATCAGGATGAAAGCAGTAACCAAGTCTCAGCGGAACAGTCGGAAGACTCAAATCCAGCAGCCATTGAGTCTGAACCAGTTACAGAGACGGAGGACAAGGAGTTGGAGACGCCAGAACCTAAGGAAAGCGAGTTTCCGTTCTTGCGTGATAGTTATTCCCAGGATAAAGGCGAGAAAGTGCATATGGAGTATGGGACgATGGAATTACAGGCTGAAACAATAAATGAGATGAATGAAGAGGCAACATCAGCTGTAGCGGCGTTGTTGAATGCTGATATCCCCGTCATTGAACAAGCTAAGGCCGCAAAAGAAATCCCAGAAGAAATGGATATTGAAACAGTAAAACTGTCAGATACGTCTGACAATGAGGTTGACATTGAACCTACTGTCGTTGAAAATACTGTGGCTGAATCTAGCAAGGAGGTTGAAGAAGAGCAAAAGAAATCACCAACAAAATCCCCACTTCAAATCAGTGTCTCCCCCAAGCAATCACCAAGCAAGCTGAAGAACTTAGCTATAACCGCACAAGCAGCTAGATCTGTTGTTAATATTGTGGATTTGGAGGAGAGCAGCTCTTCAGACGATGACATACAAGAAACGGAAGTCCAAAAACAACCATCACCGGATCCAGAGACAAAAGACGACAAACCTGCTTCCCCCGACCTGGACTCAGCAGTTACCAGCGTCAACATACCGACGGGCATAGACATAATACGTAGTGTGTCTTCCGGTGGAATTACCTCAGAGATTACTACTAAAGATGGGGAGGCCGTTATCAGTGGGGTCCCTAAACCACCGCCGCATAAGCCTgccAGATTGAATACGAGTGAAGTTTCCATCAAGACTGTTAGTTCCGCCGAACCAATGGTGATACCTGAAACtaagATAAACGAACAGATACCAACACAGCCTAAACCTAAACTGAGTCTAGAAATATTCAGTCTAGATTCTGACGATGAAGATAGTTCGGCTAAAGAAAAATCCGCAACAACACCCCAACACGAAATGACGGCCTTAGAACTGGAAAAAGCACGAGAAACATCCAAATGTATCAACTATAGTTGCACTAGCGACAACACCGTGCCATACAGAGTCGCGGAGGCAACAGAGATAGCGTACTACGACGCCAGCAGGAAGAAACGCGCCCTGGTGTGCCAGCCGTGTGCTGCTGTCGTCGCTGACAGGACTAAGAATCTAATCCAAGGCATGAAGGACCTAACTCCTCTCCTAGACCTGGACATGCGCAAGTCATCACAGGAACTGGTGGAGATATCAGATTCTGACTCTGAAGACGAGGACATGAATTCTGAAGAGCCGAAGGAGACCATCGGGAAGGAGGGGGCTAAaATCTTAGAAGACAGTCTAACCCAATTTTTTAACGACACTTGGAAGAAATACAAAATGGATGCGCGGCTGAAAGAGACGCAAATCATGTTGGATGATGAAATCGAGAAACTTGAACaGGACAGCAAAGAAATCGACGCAATGTTGAACGCATGTCAGGTAGCGACAGACAAGCTTCGTTGCGAGTTGTACGCGACGTTTGAATGTCGCCTGCAACAACTACCCGCACTAATTATACAAGACACACCCGAGAAAAAGTATATCGGACAAGAAGAGCAAGTCATCCCTCCTGTGGTTGGTGAATCAGCAGCGATTCGTCACGCCAAGCGTCGTTTGTCGTCGAGCACCAATGAGTTGCCTGCTAAACGCCCCGCCATACCGCTTGGATATGCTCCTCTCGATTCTCCAGACGCAAAGGAAAAAGCAACTATTCCGGCACCGGAGAGTAAACTGGATGATGACAAAGACATATCAGTAGTGAAGTTGTCTGCGGAAGCGGCCCCGGCCGACCTCCCCCCTCCTGGAGAGATCTCCCGCCCCCCCTTACGAGTGGGGATGCCGGTGTTTGCTATGAAGAACGCCTTCGGACCGTTTCTGAGAGGCAAGGTGCTGGAGATACAGCCCAAGAATCCTAGTGGGggcaACCCGTTCTCTCTGTGCCGCGTGAGGTTTGACCATAAAGCCAAGTCTAACGGGAAGGTGCTGCAAGCGAGGTCCATCGCTTATTCTGAACCCGCTGATGTTCGAATGACTATTGGTACTCGTCTAATAGCCTTATTCAAGGATTCGAATAAGCGCGAGTCCTACTATTCGGGCGTGGTCGCTGAAATACCCAACCCGGTGAATAATTATAGgtaCCTAGTATTCTTCGACGATGGATACGCTCAATACGTACAGCATCAGTATACCCGGCTAGTTTGTGAGAGCTCCTCTTTAGTGTGGGAGGAAGTGCATCCATTCTCGCGGGAGTTCGTGCGCGAGTACCTGATGGCGTACCCTGAGAGGCCCATGGTCAGGCTGCACACGGGGCAGCACTTGAAGACTGAGTGGAACGGAAAATGGTGGGCATCCCGGGTGACCCGAGTAGATGCATCACTAGCTCAGGTTATGTTCGTGGAGGACGGTCGGCGCGAGTGGATCTATCGCGGTTCAACACGACTCGCACCTTTGTACCTTGAACTGCGCGCCGCCGAGAGGCATCGGCCCCGGCCCATGCCCCGGAGCAAGGCGCAGCCTAGGTTGAATATGCCGTACGTGGAGTACATTCGGTCGGATGAGCAGGAAGCTAGCAAGCCACCAGATGTGCAGGTGCAGGCTCAGCAGCAAATGCAGCAACAACAGCTGCAGCGAGATGAGGAGATTCGTCGCCAACGCGCCGTGGCTAAGAAGTCCACATCAGCAGCTCCTCAAGTGTACCCGCCGACGCATCAGGTCATGCCGCCCCTTAACACGGATCCTGTCACCAGCAGAGTTGTGTACTACACACCAAAGAATGCAGTCAGGCCTTTGAAGATGGTGCCACATAGATGCACTCCTAAGTGCAAGAGAAGTGACGTGCTTTCACTGAAGGAGTTGAGAACTTACAACCCGCTGGCCAAACCACTGCTTAGCGGATGGGAAAGACAAATAGTCCGCTTCAAGGGCCACAAGGACGTCATGTACCGCGCGCCGTGCGGCCGGCGCATACGCAACATGCGCGAGCTACATTACTACTTACGTTCCATAGACAGCGACCTGCCTGTAGATCTCTTCGATTTCCACTACTCCACGCACTGTCTCGCAGAGTTCGTGTTGAACAAGTGTCTTGTGGGAAAAAAGGACCTCTCCCACGGCAAAGAGAACGTCCCGGTGCCGTGCGTGAACTACTACGACGACTCGCTCCCGGAGTTCTGTTCGTACAACACTGAGCGTACACCCACCGCCGGGGTGCCGCTCAATTTGGAGCCGGAGTTCCTGTGCGGCTGCGACTGTACCGATGATTGTCAGGATAAATCGAAATGCGCTTGCTGGAAGATGACGTTAGAGGGCGCTCGGACCATTGGCCTGGTCGGGCCCAATGTGGGCTATGTCTACAAACGATTGCCCGAACCGTTACCTTCTGGGATATATGAGTGTAATTCAAGGTGTAAATGCAAGCACACATGCCTAAATCGCGTAGCGCAACATCCACTACAATTGAAGTTGCAGGTATTCAAAACTCCTAACCGCGGTTGGGGTATCCGCGCACTGAACGACGTACCCAAAGGTTCCTTCCTCTGCGTGTACGCAGGTAACCTGCTCACCGATGCTACGGCTAACTTGGACGGTTTGAATGAGGGCGACGAATATTTAGCAGAACTGGATTATATAGAAGTTGTCGAACAAATGAAGGAAGGATATGAAGAGGACATTCCTGAGGCCGATAAGAAATTGGACAAGAAAGAATCAGGCAAAGATGATGAAGACAGCGAGGAAGacccgtcatcatcatctgaggATGAGGAGACTGCCTCCAAGACTGACAAGGAGGATGATGACTTCAGACCTGGCCACCTTGGACTGGGACTCGGTACTGGCGTTGCGGAGTTCAACAAACGCCTTCGTAAACGCGAGAAATCaaagaaagataaagaaaaTGCGGCGGCTGGGGAtaaagataaagaaaaagatacgaCTAAAGATATTAAAGAACCAAAGGAAGCGAATGCTGAAGAAGATTGTATTACAATTAGTGATGATGAAGAAGGTATGTTACAATCAATAATGAATCTTAACACGTTTGTTTAG
Protein Sequence
MSAREENDNEEKEILRKNQGFNNPETLTESNVLSLDSNRNTGINSNISENVHRTAAIEGSGDNAGRIVQEDSELDKIEAELSEISKELTDAGIGSGDYTAKATVSDIDDKIIEDINIETSKTVVEKGGSNHDHLDKCDDIELKKADDFDEFEDEDMQLRWDEDDDASNQLEGDDNANVGNKIDGILSEDQLLEDTSDVLTGKGNLESVTVRDTSKESETSPKLDFLTDQADLEKSLEEELLEEPDVNTEAIKNPEMVFSAEEKMDRDFLEEKILEDSEMNSQTEFIAQAKEIIDVESTNEQIKKIKPAEKLIKKDELKHFTEILQMTSSNNDALSKDNLLEKPDYKDKSSEIIPVKVTESSDNIPGKKKEYPMNKKLDDDVLLEEKLLEEPETAEVIPESDVTMEVDDENEAELLKDDGGQNDSSTPMDVDSTDPSIKDQAKIDSIIDQPMDDESEVGKKEIAQTNLEKVDINQTTDEIKVMNESDLIHQPVEDTTKTIEVIKDLPVEEKSATVEFDKETAIGDQAKIDKQNIELAASEMENLNQLMNDEKKMVENSEVQIIVETNKTEESSKTPEQSNTVTVSNIPNIQIEGQEKSIPDKSTLEKEIESKEEQEQTKLNTQSVHVDINFEKPEKSKEIVELDTNLDENNVTAEVSPSSSIFRDSLSPIKSFHGLNKPDVMLEIPTQELIDMDMTDLSMNLDQSEVLDSNDIDQNVTKAEKDTETEKSVDNLTKVVDDTANQNAVDQDSIVTETKADKFTENVTANEESVDQQTTVTEATVDKVPIVIQTVESGKKEETVVEATIEENMEMLFADVEPEVAKEVPECIASTSETLEQPSTSTTQMAPDTSDEVPDQVSDSLGLLAESTRVMEDDEENDDDDDGDDDDDFDQDESSNQVSAEQSEDSNPAAIESEPVTETEDKELETPEPKESEFPFLRDSYSQDKGEKVHMEYGTMELQAETINEMNEEATSAVAALLNADIPVIEQAKAAKEIPEEMDIETVKLSDTSDNEVDIEPTVVENTVAESSKEVEEEQKKSPTKSPLQISVSPKQSPSKLKNLAITAQAARSVVNIVDLEESSSSDDDIQETEVQKQPSPDPETKDDKPASPDLDSAVTSVNIPTGIDIIRSVSSGGITSEITTKDGEAVISGVPKPPPHKPARLNTSEVSIKTVSSAEPMVIPETKINEQIPTQPKPKLSLEIFSLDSDDEDSSAKEKSATTPQHEMTALELEKARETSKCINYSCTSDNTVPYRVAEATEIAYYDASRKKRALVCQPCAAVVADRTKNLIQGMKDLTPLLDLDMRKSSQELVEISDSDSEDEDMNSEEPKETIGKEGAKILEDSLTQFFNDTWKKYKMDARLKETQIMLDDEIEKLEQDSKEIDAMLNACQVATDKLRCELYATFECRLQQLPALIIQDTPEKKYIGQEEQVIPPVVGESAAIRHAKRRLSSSTNELPAKRPAIPLGYAPLDSPDAKEKATIPAPESKLDDDKDISVVKLSAEAAPADLPPPGEISRPPLRVGMPVFAMKNAFGPFLRGKVLEIQPKNPSGGNPFSLCRVRFDHKAKSNGKVLQARSIAYSEPADVRMTIGTRLIALFKDSNKRESYYSGVVAEIPNPVNNYRYLVFFDDGYAQYVQHQYTRLVCESSSLVWEEVHPFSREFVREYLMAYPERPMVRLHTGQHLKTEWNGKWWASRVTRVDASLAQVMFVEDGRREWIYRGSTRLAPLYLELRAAERHRPRPMPRSKAQPRLNMPYVEYIRSDEQEASKPPDVQVQAQQQMQQQQLQRDEEIRRQRAVAKKSTSAAPQVYPPTHQVMPPLNTDPVTSRVVYYTPKNAVRPLKMVPHRCTPKCKRSDVLSLKELRTYNPLAKPLLSGWERQIVRFKGHKDVMYRAPCGRRIRNMRELHYYLRSIDSDLPVDLFDFHYSTHCLAEFVLNKCLVGKKDLSHGKENVPVPCVNYYDDSLPEFCSYNTERTPTAGVPLNLEPEFLCGCDCTDDCQDKSKCACWKMTLEGARTIGLVGPNVGYVYKRLPEPLPSGIYECNSRCKCKHTCLNRVAQHPLQLKLQVFKTPNRGWGIRALNDVPKGSFLCVYAGNLLTDATANLDGLNEGDEYLAELDYIEVVEQMKEGYEEDIPEADKKLDKKESGKDDEDSEEDPSSSSEDEETASKTDKEDDDFRPGHLGLGLGTGVAEFNKRLRKREKSKKDKENAAAGDKDKEKDTTKDIKEPKEANAEEDCITISDDEEGMLQSIMNLNTFV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01533075;
90% Identity
-
80% Identity
-