Basic Information

Gene Symbol
-
Assembly
GCA_950022955.1
Location
OX465573.1:9881235-9887313[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 7 0.081 1.7e+02 4.0 1.4 1 18 72 89 72 129 0.58
2 7 0.025 53 5.6 0.0 21 44 343 367 335 369 0.86
3 7 0.78 1.6e+03 0.8 0.3 13 45 431 468 418 469 0.69
4 7 0.0062 13 7.5 0.2 22 46 589 616 569 616 0.76
5 7 0.00037 0.77 11.5 0.2 3 44 667 717 665 719 0.80
6 7 6.3e-06 0.013 17.1 0.2 13 42 851 887 836 891 0.79
7 7 0.058 1.2e+02 4.4 0.1 3 15 1046 1058 1044 1105 0.88

Sequence Information

Coding Sequence
ATGGATGGTTCAATAGTGGTGAAAACTGAGATGGGATCCAATGGAGAAATACTGCTTTTCTATGTTGATGAAAACGGTGGTAATGAAGAAGGAGTATTAACAACAGTTGAAAGCATAGAAGACCAAGCCATACAAATGCAACAAGAAAACTCTTATATCATCCAAGATGATGGAGATGATTCAAATGAAATAAGGATTGAACAAGCGATGCTAAAAGAAAAGTGGACTGAGGACGAAACCAAAAGATTACTTGTATTCTACAATGATAACAAACAGGCTTTTATATCCGGAGCAACGAAAAAGAAACATCTTTGGACAGTTGCATGCAAGACCATGCTTGTGGGAAAAAATCCAAACTCATGCGAATCAAAACTCAACAGCTTACAAGAAATGTACATTGAAATCTGTGGCCACATACAGAAAGGAGTCTATGTAAAGTGGCCATACTTTGAACTGTGCCACCAAATATTCCACGAAGAAACCCCCATGATTACGGTTGAAACATTAAACACACTGGAACCACAGATAATCAAAGTTCCAGCTCTGAAACAGAATTATGATAATGTAATGATGGTAAAAAAGGTGAATAAATCAAATGTTGATGAAAAAGTAGAAACTATGctaaacttgtatttgaaatacaagaaaaacttCCAAGCTGAGTACTGGAGACGGGGCATTTGGGAGACCATTGCTTTAGAGATAGGAGAAGATGATGGAGAATACTGGCAGAAACGGTTCTTGAACTACAAGCAACATTACCTAAGACTGATTGACAAAAGACGAGTAAGCGGCTCGGAAGGCATCAACTGGCCTTACCTGGAACTATTTGACAAAATCTTTGAAGGTGATGAGGACTTCCAtagaaaatatttgaccagtgaGTACAGATTGATTGAAAACCAGGCAATAGCTGAAGTTGAAGAGCCACCTCCTAAAGTCGAAGATTGGGACACAACAGAAATGACAGTATTAGTCAAATACTGTTTTGATTGCTTTGATGAATTTCAAGACAAAACCATTCCCAACAATTTCCTTTGGAACGAAATTGGTCGTTTACTTGACAAGACGGCTGAAACTTGCAAAACTAAATATGAAGAATTAAAGAATGCACATTTAGACAAATACATTGGAGGTGGTTATGACTTAAGAAACAGAAAACCTATTGCAATTCTGTTTGACAATATAATATCTAAAGAAATTGagaatcaaataataaaaagtggcCGAAAACCTGAGCCTCTAGAGATATGGAAGACAGAGGAATTAGATGAGCTTGTACAATTTTTCTATGACAACATAGAAATGTATAAAGATATGATATGCCACTTTGTATGCTGGGCAGGGGTTACCAAAAAGCTGAAAAGAAATCTTGCATGTTGCAGAAGTCAATGGGTAGACCTATTAGGTCTTTACAAGACAATATTGGATGACAAGAAAGAAAATCCTGACATGCAAATAGATTGGAGGTACATTGAAGTGTTTGATAGAATATTTGACTATGGAATGGATACTAGCTTGCTGTCTGGGTATGAAACCTTGAAAGGATTTGGACAGAATCAGAAAACTGATACTAAAATTGGTGTAAAAAAGGTGAACATCAAATTAGACGAGGAAATGGAAGAATTTACTGACGATGAAGAATCATACGACGAACGAGGCTTCACAAAGCGCACAAAACGCCGCTCAGGAGACTCTAAAGCCTTCAAAATCCTCGAATATTACCAGAAAAACAAAGATAAGTTCTCCACAACCACTAATAGAAACAAACACTCTCTATGGGACATACTCGCTAAACAGATAGGTATATCTGCTACTCAATGCGCACACCGATTCAGGAATTTAAAGCAAGTGTACACTGCTTACGTCCAAAGAGAAATCAGTAAACCTGAAATGCCAATCCTTTGGCCTTACTACGCTCTAtgcaaaaaagtatttggctACAGGGCAATCAAATCTAAACTTAAGAACGGAAAATTGGACTCTGATGACAGCGAAGACTGGTCAgcgaaagaaataaaacaattaataaactATTTCGCACAAAACTTCGATGATATCAACAGTAATATTGAAGACAAAACTAAATGGACGGACTTAGCGGGCGAAATAGGCAAAGGCGAGAATTCTTGTAAGGAAAAGTTTATAGAACTGAGAAAGTCTTACAGGAAATTAAAAACTATGAGGAGCAGGAATCCCGAAACAAAGATATCTTGGAAATATTTCAATATGTTTGAAGATATTTTTAATGCGAGGGAGAATGGTGTGGAGACCATGGAGATGGATGGTAATGACGTAACGTATATGGAGGTACCTGCGGCATCTGATGAAAAGATGGAGCAAGAAGAAGATCAAGACGACTACCAATGCATCATAGTTATCCCAGAGGGTCAAGATATATCCGACATCGAGAACGCACGAATCATAATACAAGAAAATCCAATGCCTGCGTTCCAAGAAGAAACTGTCACCACAGAACCACCAAAGGAGACTCTCAAACCACTCGTCAAATGGACGAAGAGAACTAAAAAGAAGTTACTTATCTTCTACATAAACTATATCAGAACACATAAGGGTAAAGAGATAAATGCTAAAGATATGTGGGCAGAAATAGCTTCAAAATTACCCAATAAGACACCATTGTCTTGTAGAAAAATGTTTGCCAAACTCAAGGCAAATCATAAGCAAATTGATGTATTAGACCCTAATATGAAGAAAACACCCTATTTCGGTTTAATGGAGAAAGTAATGCGTCTAAAACCCAAATTCACTAAAACGGAGCAAAGTAAGGCTCTAAAAGATGGAAAAGTGTACAAAGATGTAGTTTTACCTGACGATAAAGTGGTCCAAGCATTGCAATACTATTTAGAAAATATTGAAGATTTCGTCAGCCCTAGATTTGAGAAGAAATACCTTTGGACTGAACTTGCCAATTACGTTTGCGAACCGATTACTAAAGTGTTCAACAAAATCAACTATTTAAAACAAGCTTACAACATGGATACGGATGAAGTCGCAGGGGTAAAGACGCCATTTgcagaatttttaaaagaaatcattGCTAAGGAAATAGCTATAAAGCTTGTATTAGAAAATCAGCCAAAACCTGTGATCGAAGAGTCGGGCGTTGAAGAAACCTGGTCTGATGAAGAGACAGAACAGTTATTGGAATGGTATCTAAGCAATTTAGATAAATTCAAGAACCCCAAATTCGTCAGATCCTATCTATGGATGGAAGTATCCGGCATGCTAAATAAAAGTGCCATTACTTGCTCAAAGAAAATGTCGGAAATTCGAACTCAGTATAGAAATATGGTTAGAGAAAGACCGGAGGAATTGAATGAATGGAGATTCTTAGATCTTTGTCAGAAAATCTATGGAACTGGCAAGAAAGGTACTCCGATGAATAGTAATTGA
Protein Sequence
MDGSIVVKTEMGSNGEILLFYVDENGGNEEGVLTTVESIEDQAIQMQQENSYIIQDDGDDSNEIRIEQAMLKEKWTEDETKRLLVFYNDNKQAFISGATKKKHLWTVACKTMLVGKNPNSCESKLNSLQEMYIEICGHIQKGVYVKWPYFELCHQIFHEETPMITVETLNTLEPQIIKVPALKQNYDNVMMVKKVNKSNVDEKVETMLNLYLKYKKNFQAEYWRRGIWETIALEIGEDDGEYWQKRFLNYKQHYLRLIDKRRVSGSEGINWPYLELFDKIFEGDEDFHRKYLTSEYRLIENQAIAEVEEPPPKVEDWDTTEMTVLVKYCFDCFDEFQDKTIPNNFLWNEIGRLLDKTAETCKTKYEELKNAHLDKYIGGGYDLRNRKPIAILFDNIISKEIENQIIKSGRKPEPLEIWKTEELDELVQFFYDNIEMYKDMICHFVCWAGVTKKLKRNLACCRSQWVDLLGLYKTILDDKKENPDMQIDWRYIEVFDRIFDYGMDTSLLSGYETLKGFGQNQKTDTKIGVKKVNIKLDEEMEEFTDDEESYDERGFTKRTKRRSGDSKAFKILEYYQKNKDKFSTTTNRNKHSLWDILAKQIGISATQCAHRFRNLKQVYTAYVQREISKPEMPILWPYYALCKKVFGYRAIKSKLKNGKLDSDDSEDWSAKEIKQLINYFAQNFDDINSNIEDKTKWTDLAGEIGKGENSCKEKFIELRKSYRKLKTMRSRNPETKISWKYFNMFEDIFNARENGVETMEMDGNDVTYMEVPAASDEKMEQEEDQDDYQCIIVIPEGQDISDIENARIIIQENPMPAFQEETVTTEPPKETLKPLVKWTKRTKKKLLIFYINYIRTHKGKEINAKDMWAEIASKLPNKTPLSCRKMFAKLKANHKQIDVLDPNMKKTPYFGLMEKVMRLKPKFTKTEQSKALKDGKVYKDVVLPDDKVVQALQYYLENIEDFVSPRFEKKYLWTELANYVCEPITKVFNKINYLKQAYNMDTDEVAGVKTPFAEFLKEIIAKEIAIKLVLENQPKPVIEESGVEETWSDEETEQLLEWYLSNLDKFKNPKFVRSYLWMEVSGMLNKSAITCSKKMSEIRTQYRNMVRERPEELNEWRFLDLCQKIYGTGKKGTPMNSN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2