Basic Information

Gene Symbol
-
Assembly
GCA_941918865.2
Location
CALNXB020000180.1:4793742-4798442[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 7 0.082 84 3.9 1.5 1 18 72 89 72 129 0.58
2 7 0.0036 3.7 8.3 0.0 21 44 343 367 335 369 0.86
3 7 0.38 3.9e+02 1.8 0.1 13 45 431 468 420 469 0.73
4 7 0.0062 6.3 7.5 0.2 22 46 589 616 569 616 0.76
5 7 0.00099 1 10.1 0.2 3 44 667 717 665 719 0.80
6 7 6.3e-06 0.0064 17.1 0.2 13 42 849 885 834 889 0.79
7 7 0.058 59 4.4 0.1 3 15 1044 1056 1042 1103 0.88

Sequence Information

Coding Sequence
ATGGAAGGTTCAATAGTAGTGAAAACTGAGATGGGTTCTGATGGAGAAATACTGCTATTCTATGTTGATGAAAACGGTGGTAATGAAGAAGGAGTATTAACAACAGTTGAAAGCATAGAAGACGAAGCCATACAAATGCAACAAGATAACTCCTATATCATGCAAGATGATGGAGATGATTCAAATGAAATAAGGATTGAACAAGCCATGCTAAAAGAAAAGTGGACTGAAGATGAAACCAAAAGATTACTTGTATTCTACAATGATAACAAACAGGCATTTATATCCGGAGCAACGAAAAAGAAACATCTATGGACCGTAGCATGCAAGACCATGCTCGTCGGGAAAAATCCAAACTCATGCGAATCAAAACTCAATAGCTTACAAGAAAAGTACAATGAAATCTGTGGTCACATACAGAAAGGAGTCTACGTAAAGTGGCCATACTTTGAACTTTGCCACCAAATATTCCACGATGAAACCCCGATGATTACGGTTGAAACGTTAAACACACTGGAACCACAGATAATCAAAGTTCCAGCTCTGAAACAGAATTATGATAATGTAATGATGGTAAAAAAGGTCAATAAGTCAAATGTTGATGAAAAAGTGGAAATGATGCTAAACTTGTATTTGAAATACAAGAAAAACTTCCAAGCTGAGTACTGGAGAAGGGGCATTTGGGAGACAATTGCTTTACAGATAGGGGAAGATGACGGTGAATACTGGCAGAAACGGTTCTTGAACTACAAGCAACATTACCTAAGACTGATTGACAAAAGACGAGAAAGCGGCTCAGAAGGCATCAATTGGCCCTACCTGGAACTATTTGACAAAATCTTCGAAGGTGACGAGGACTTCCATAGAAAATATCTGACCGATGAGTACAGATTCATTGAAAACCAGGCGATAGCTGAAGTTGAAGAGCCGCCTCCTATTGTCGAAGATTGGGACACAACAGAAATGACAGTATTAGTCAAATACTGTTTTGATTGCTTTGATGAGTTTCAAGACAAAACCATTCCCAACAATTTTCTTTGGAACGAAATTGCCCGTTTACTTGACAAGACCGCTGAAACCTGCAAAACTAAATATGAAGAACTAAAGAATGCACATTTAGACAAATACATTGAAGGCGGTTATGATTTAAGAAACAGAAAACCCATTGCAATTCTATTTGACAATATAATATCGAAAGAAATTGAGAATCTAATAATAATAAGCGGCCGAAAGTCTGAGCCACTTGAGATTTGGAAGACGGATGAATTGGATGAGCTAGTACAATTTTTCTATGACAACATAGAAATGTATAAAGATATGATTTGCCACTTTGTATGCTGGGCAGGGATTACCAAAAAGCTGAAAAGAAATCTTGCATGTTGCAGAAGTCAATGGGAAGACCTATTAAGTCTTTACAAGACAATATTGAATGATAAGAAAGAAAATCCTGATATGCAAATAGATTGGAGATACATTGAAGTCTTTGATAGAATATTTGACTATGGTATGGATACTAGCTTGCTTTCTGGGTATGAAACCTTGAAAGGATTTGGACAGAATCAGAAAAGTGATACAAAAATTGGTGTAAAAAAGGTGAACATCAAATTAGACGAGGATATAGAAGAATTTACTGACGATGAAGAATCATACGACGAACGAGGCTTCACAAAGCGCACAAAACGCCGCTCAGGAGACTCCAAAGCGTTCAAAATCCTCGAATACTACCAGAAAAACAAAGATAAGTTCTCCACAACCACAAATAGAAACAAACATTCTCTATGGGACATACTCGCTAAACAGATAGGCATATCTGCCACTCAATGCGCACACCGATTCAGGAATTTAAAGCAAGTGTACACTGCTTACGTCCAACGAGAAATCAGTAAACCTGAAATGCCAATCCTTTGGCCTTACTATGCTCTATGCAAAAAAGTATTTGGCTACAGAGCAATCAAATCTAAACTTAAGAATGGAAAATTGGATTCCGACGACAGCGAAGACTGGTCAGCGAAAGAGATAAAACAATTAATAAACTATTTCGCACAAAACTTCGATGATATTAATAGTAATATTGAAGACAAAACTAAATGGACCGACTTATCTGGCGAAATCGGCAAAGGCGAGAATTCTTGTAAGGAAAAGTTTATAGAACTGAGAAAGTCTTACAGGAAATTAAAAACTATGAGGAGCAGGAATCCCGAAACAAAGATATCTTGGAAATATTTCAATATGTTTGAAGATATTTTTAATGCGAGGGAGAATGGTGTGGAGACAATGGCGGTGGATGGTAATGAGGTGACTTATATGGAGATACCTGCTTCTGCTGATGAAAAGATGGAGCAAGAAGAAGACCAAGACGACTACCAATGCATCATAGTTATCCCAGAGGGTCAAGATATATCCGACATCGAGAATGCACGAATAATAATACAAGAAAATCCAACGCTCCAAGAAGATACCGACACCACAGAACCACCGAAAGAGACACTCAAACCACTCGTCAAATGGACGAAGAGAACCAAAAAGAAGTTACTTATCTTCTACATAAACTATATCAGAACACATAAGGGTAAAGAGATAAATGCCAAAGATATGTGGGCAGAAATAGCTTCTAAATTACCCAATAAGACACCATTGTCTTGTAGAAAAATGTTTGCCAAACTCAAGGCAAATCATAAGCAAATTGATGTACTAGATCCTAATATGAAGAAAACACCATATTTCGGGTTAATGGAGAAAGTAATGCGTCTAAAACCCAAATTCACTAAAACCGAGCAAAATAAGGCTTTAAAGGATGGAAAAGTATACAAAGATGTAGTTTTACCTGACGATAAAGTGGTCCAAGCATTGCAATACTATTTAGAAAATATTGAAGATTTCGTCAGCCCTAGATTCGAGAAGAAATACCTCTGGACTGAACTTGCCAATTACGTTTGCGAACCAATTACTAAAGTGTTCAACAAAATCAACTATTTAAAACAAGCTTATAACATGGACACGGATGAAGTCGCAGGCGTAAAGACGCCATTTGCAGAATTCTTAAAAGAAATCTTCGCTAAGGAAATAGCTATTAAGCTTGTGTTAGAAAATCAGCCGAAACCACTGATTGAAGAGCCGGGCGTAGAAGAAACCTGGTCTGATGAAGAGACAGAACAGTTATTGGAATGGTATCTAAGCAATTTAGACAAATTCAAGAACCCAAAATTCGTCAGATCTTACTTATGGCTGGAAGTTTCAGGCATGCTAAATAAAAGCGCCATTACTTGCTCAAAGAAGATGTCGGAAATTCGAACTCAGTATAGAAATATGGTCAGAGAAAGACCAGAAGAGTTGAATGAGTGGAGATTCCTAGATCTTTGTCAGAAAATCTATGGAACTGGCAAAAAAGGTACTCCGATGAATAGTAATTAA
Protein Sequence
MEGSIVVKTEMGSDGEILLFYVDENGGNEEGVLTTVESIEDEAIQMQQDNSYIMQDDGDDSNEIRIEQAMLKEKWTEDETKRLLVFYNDNKQAFISGATKKKHLWTVACKTMLVGKNPNSCESKLNSLQEKYNEICGHIQKGVYVKWPYFELCHQIFHDETPMITVETLNTLEPQIIKVPALKQNYDNVMMVKKVNKSNVDEKVEMMLNLYLKYKKNFQAEYWRRGIWETIALQIGEDDGEYWQKRFLNYKQHYLRLIDKRRESGSEGINWPYLELFDKIFEGDEDFHRKYLTDEYRFIENQAIAEVEEPPPIVEDWDTTEMTVLVKYCFDCFDEFQDKTIPNNFLWNEIARLLDKTAETCKTKYEELKNAHLDKYIEGGYDLRNRKPIAILFDNIISKEIENLIIISGRKSEPLEIWKTDELDELVQFFYDNIEMYKDMICHFVCWAGITKKLKRNLACCRSQWEDLLSLYKTILNDKKENPDMQIDWRYIEVFDRIFDYGMDTSLLSGYETLKGFGQNQKSDTKIGVKKVNIKLDEDIEEFTDDEESYDERGFTKRTKRRSGDSKAFKILEYYQKNKDKFSTTTNRNKHSLWDILAKQIGISATQCAHRFRNLKQVYTAYVQREISKPEMPILWPYYALCKKVFGYRAIKSKLKNGKLDSDDSEDWSAKEIKQLINYFAQNFDDINSNIEDKTKWTDLSGEIGKGENSCKEKFIELRKSYRKLKTMRSRNPETKISWKYFNMFEDIFNARENGVETMAVDGNEVTYMEIPASADEKMEQEEDQDDYQCIIVIPEGQDISDIENARIIIQENPTLQEDTDTTEPPKETLKPLVKWTKRTKKKLLIFYINYIRTHKGKEINAKDMWAEIASKLPNKTPLSCRKMFAKLKANHKQIDVLDPNMKKTPYFGLMEKVMRLKPKFTKTEQNKALKDGKVYKDVVLPDDKVVQALQYYLENIEDFVSPRFEKKYLWTELANYVCEPITKVFNKINYLKQAYNMDTDEVAGVKTPFAEFLKEIFAKEIAIKLVLENQPKPLIEEPGVEETWSDEETEQLLEWYLSNLDKFKNPKFVRSYLWLEVSGMLNKSAITCSKKMSEIRTQYRNMVRERPEELNEWRFLDLCQKIYGTGKKGTPMNSN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00771874;
90% Identity
iTF_01531969;
80% Identity
-