Basic Information

Gene Symbol
-
Assembly
GCA_905220335.1
Location
LR999917.1:5110329-5114706[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 7 0.21 3.4e+02 2.1 0.9 1 43 72 126 72 129 0.53
2 7 0.018 29 5.6 0.0 21 44 344 368 336 370 0.86
3 7 0.11 1.7e+02 3.1 0.2 13 45 432 469 419 470 0.71
4 7 0.0043 7.1 7.5 0.2 22 46 590 617 570 617 0.76
5 7 0.00025 0.42 11.5 0.2 3 44 668 718 666 720 0.80
6 7 5.7e-06 0.0094 16.8 0.2 13 42 850 886 835 890 0.82
7 7 0.11 1.8e+02 3.0 1.2 3 15 1045 1057 1043 1067 0.89

Sequence Information

Coding Sequence
ATGGAGGGTTCTATAGTGGTGAAAACTGAGATGGGGTCCAACGGAGAAATACTGCTTTTCTATGTTGATGAAAACGGTGGTAATGAAGAAGGTGTATTAACAACAGTTGAAAGTATAGAAGACCAAGCTATACAGCTGCAACAAGATAACTCCTATATCATCCAAGAAGATGGAGATGATTCAAATGAAATAAGGATTGATCAAGCCAACCTAAGAGAGAAGTGGACTGAGGACGACACCAAAAGACTACTTGTATTCTACAATGACAACAAACAGGCTTTTATTTCCGGAGCAACGAAAAAGAAACATCTCTGGACCGTAGCATGCAAGACCATGCTTGTCGGAAAAAATCCAAACTCATGCGAATCAAAACTCAACAGCTTACAAGAAAAGTACAATGAAATCTGTGGTCACATACAGAAAGGAGTCTACGTAAAGTGGCCATACTTTGAACTATGCCACCAAATATTCCACGATGAAACCCCAATGATTACGGTTGAAACCTTAAACACCTTAGAACCACAGATAATCAAAGTTCCAGCTCTGAAACAGAATTATGATAATGTAATGATGGTGAAAAAGGTGAATAATCGGTCAAATGTTGATGAGAAAGTAGAAATGATGCTAAAATTGTATTTGAAATACAAGAAAAACTTCCAAGCAGAGTACTGGAGACGGGGCATTTGGGAGACCATTGCTTTAGAGATAGGAGAAGATGACGGAGAATATTGGCAGAAACGGTTCTTGAACTACAAGCAACATTACCTAAGACTGATTGACAAAAGACGAGAAAGTGGCTCAGAAGGCATCAACTGGCCCTACCTGGAACTATTTGACAAAATCTTCGAAGGTGACGAGGACTTCCATAGAAAATATCTGACCGATGAGTACAGATTGATTGAAAACCAGGCGATAGCTGAAGTTGAAGAACCACCTCCTAAAGTCGAAGATTGGGACACAACAGAAATGACAGTATTAGTCAAATACTGTTTTGATTGCTTTGATGAATTTCAAGACAAAACCATTCCCAACAATTTCCTTTGGAACGAAATAGGCCGTTTACTTGACAAGACTGCTGAAACGTGTAAAACTAAATATGAAGAACTGAAGAACGAACATTTAGACAAATACATCGAAGGTGGCTATGACTTAAGAAACAGAAAACCTATTGCAATTCTATTTGACAATATAATATCTAAAGAAATTGAGAATCAAATAATAAAGAGTGGCCGAAAGCCTGAGCCACTGGAGATATGGAAGACGGAGGAATTGGATGAGCTAGTACAGTTTTTTTATGACAACATAGAAATGTATAAAGATATGATATGCCACTTTGTATGCTGGGCAGGGGTTACCAGAAAGCTGAATAGAAATCTTCCAAGTTGCAGGAGTCAATGGGAAGACCTATTAAGTCTCTACAAGACAATTTTGAATGATAAGAAAGAAAATCCTGATATGCAAATTGATTGGAGATACATTGAAGTCTTTGATAGAATATTTGACTATGGCATGGATACTAGCTTGCTTTCTGGGTATGAAACCTTGAAAGGATTTGTACAGAGTCAGAAAAATGATACAAAAATTGGTGTAAAGAAAGTAAACATCAAATTAGATGAGGAAATGGAAGAATTTACTGACGATGAAGAATCATACGACGAACGAGGCTTCACAAAGCGCACGAAACGCCGCTCAGGAGACTCTAAAGCGTTCAAAATCCTCGAATACTACCAGAAAAACAAAGATAAGTTCTCCACTACCACAAATAGAAACAAACATTCTCTATGGGACATACTCGCTAAACAGATAGGCATATCTGCCACTCAATGCGCACACCGATTCAGGAATTTAAAGCAAGTATACACTGCTTACGTCCAAAGAGAAATCAGCAAACCAGAAATGCCTATCCTCTGGCCTTACTACGCTCTATGCAAAAAAGTATTTGGCTACAGAGCAATCAAATCTAAACTAAAGAACGGAAAATTGGACTCCGATGACAGCGAAGACTGGTCAGCGAAGGAAATAAAACAATTAATAAACTATTTCGCACAAAACTTCGATGATATCAACAGTAATATTGAAGACAAAACCAAATGGACGGACTTAGCGGGCGAAATTGGTAAAGGAGAGAATTCTTGCAAGGAAAAATTTATAGAACTGAGAAAGTCTTACAGGAAATTGAAAACTATGAGGAGTAGGAACCCTGAAACAAAGATATCTTGGAAATATTTCAATATGTTTGAAGATATTTATAATGCGCGGGAGAATGGTGTGGAGACAATGGAGGTGGATGCTAATGAGGTGACCTATATGGAGATACCTGCGGCTTCTGATGAAAAGATTGAGCAAGAAGAAGACCAAGACGACTATCAATGCATCATCGTTATCCCAGAGGGTCAAGACATATCCCAGATCGAGAACGCACGAATCATAATACAAGAAAATCCAATGCCCCAAGAAGAAACCGTCACCACAGAACCACCAAAGGAGACACTCAAACCTCTCGTCAAATGGACGAAGAGAACCAAAAAGAGGTTACTTATCTTCTACATAAACTATATCAGAACACATAAGGGTAAAGAGATTAATGCCAAAGATATGTGGGCAGAAATAGCTTCTAAATTACCCAACAAGACACCATTGTCTTGTAGAAAAATGTTTGCCAAACTGAAGGCAAATCATAAGCAAACTGATGTACTAGACCCTAATATGAAGAAAACGCATTATTTCGCGTTGATGGAAAAAGTAATGCGTCTAAAGCCCAAATTCACTAAAACCGAGCAAAATAAGGCTTTGAAGGATGGAAAAGTGTACAAAGATGTAGTTCTACCTGACGATAAAGTGGTCCAAGCATTGCAGTACTATTTAGAAAATATTGAAGACTTTGTCAGCCCTAGGTTCGAGAAGAAATACCTTTGGACTGAACTTGCCAATTACGTTTGCGAACCAATTACTAAAGTGTTCAACAAAATCAACTATTTAAAACAAGCTTATAACATGGATACGGATGAAGTCGCAGGCGTAAAGACACCATTTGCAGAATTCTTAAAAGAAATCTTCGCTAAAGAAATAGCTATAAAACTTGTATTAGAAAATCAGCCAAAACCAGTGATTGAAGAGCCAGGAGTTGAAGAAACCTGGTCTGATGAAGAGACGGAACAGTTATTGGAATGGTATCTAAGTAATTTAGATAAATTCAAGAACCCTAAATTCGTCAGATCCTACCTATGGATGGAAGTTTCAGGCATGCTACATAAAAGCGCCATTACTTGCTCAAAGAAAATGTCGGAAATTCGTACTCAGTATAGAAATATGGTCAGAGAAAGACCTGAGGAGTTGAATGAATGGAGATTCCTAGATCTTTGTCAGAAAATCTATGGGACCGGCAAGAAAGGTACTCCGATGAATAGTAATTAA
Protein Sequence
MEGSIVVKTEMGSNGEILLFYVDENGGNEEGVLTTVESIEDQAIQLQQDNSYIIQEDGDDSNEIRIDQANLREKWTEDDTKRLLVFYNDNKQAFISGATKKKHLWTVACKTMLVGKNPNSCESKLNSLQEKYNEICGHIQKGVYVKWPYFELCHQIFHDETPMITVETLNTLEPQIIKVPALKQNYDNVMMVKKVNNRSNVDEKVEMMLKLYLKYKKNFQAEYWRRGIWETIALEIGEDDGEYWQKRFLNYKQHYLRLIDKRRESGSEGINWPYLELFDKIFEGDEDFHRKYLTDEYRLIENQAIAEVEEPPPKVEDWDTTEMTVLVKYCFDCFDEFQDKTIPNNFLWNEIGRLLDKTAETCKTKYEELKNEHLDKYIEGGYDLRNRKPIAILFDNIISKEIENQIIKSGRKPEPLEIWKTEELDELVQFFYDNIEMYKDMICHFVCWAGVTRKLNRNLPSCRSQWEDLLSLYKTILNDKKENPDMQIDWRYIEVFDRIFDYGMDTSLLSGYETLKGFVQSQKNDTKIGVKKVNIKLDEEMEEFTDDEESYDERGFTKRTKRRSGDSKAFKILEYYQKNKDKFSTTTNRNKHSLWDILAKQIGISATQCAHRFRNLKQVYTAYVQREISKPEMPILWPYYALCKKVFGYRAIKSKLKNGKLDSDDSEDWSAKEIKQLINYFAQNFDDINSNIEDKTKWTDLAGEIGKGENSCKEKFIELRKSYRKLKTMRSRNPETKISWKYFNMFEDIYNARENGVETMEVDANEVTYMEIPAASDEKIEQEEDQDDYQCIIVIPEGQDISQIENARIIIQENPMPQEETVTTEPPKETLKPLVKWTKRTKKRLLIFYINYIRTHKGKEINAKDMWAEIASKLPNKTPLSCRKMFAKLKANHKQTDVLDPNMKKTHYFALMEKVMRLKPKFTKTEQNKALKDGKVYKDVVLPDDKVVQALQYYLENIEDFVSPRFEKKYLWTELANYVCEPITKVFNKINYLKQAYNMDTDEVAGVKTPFAEFLKEIFAKEIAIKLVLENQPKPVIEEPGVEETWSDEETEQLLEWYLSNLDKFKNPKFVRSYLWMEVSGMLHKSAITCSKKMSEIRTQYRNMVRERPEELNEWRFLDLCQKIYGTGKKGTPMNSN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00771874;
90% Identity
iTF_01531969;
80% Identity
-