Basic Information

Gene Symbol
-
Assembly
GCA_905163415.1
Location
LR990946.1:5456331-5461676[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 7 0.35 4.1e+02 2.1 0.9 1 43 72 126 72 129 0.53
2 7 0.029 34 5.6 0.0 21 44 344 368 336 370 0.86
3 7 0.03 35 5.5 0.1 13 45 432 469 419 470 0.72
4 7 0.0072 8.4 7.5 0.2 22 46 590 617 570 617 0.76
5 7 0.00042 0.49 11.5 0.2 3 44 668 718 666 720 0.80
6 7 7.3e-06 0.0085 17.1 0.2 13 42 848 884 833 888 0.79
7 7 0.18 2.1e+02 3.0 1.2 3 15 1043 1055 1041 1065 0.89

Sequence Information

Coding Sequence
ATGGAGGGCTCAATAGTGGTGAAAACTGAGATGGGGTCCAATGGAGAAATACTGCTTTTCTATGTTGATGAAAACGGTGGTAATGAAGAAGGAGTATTAACAACAGTTGAAAGTATAGAAGACCAAGCCATACAACTGCAACAAGATAACTCCTATATCATCCAAGATGATGGAGATGATTCAAATGAAATAAGGATTGATCAAGCCAACCTAAGAGAAAAGTGGACTGAGGACGACACCAAAAGACTACTTGTATTCTACAATGATAACAAACAGGCTTTTATATCCGGAGCAACGAAAAAGAAACATCTCTGGACCGTAGCATGCAAGACCATGCTTGTCGGAAAAAATCCAAATTCATGCGAATCAAAACTCAACAGCTTACAAGAAAAATACAATGAAATCTGTGGTCACATACAGAAAGGAGTCTACGTGAAGTGGCCATACTTTGAACTATGCCACCAAATATTCCATGATGAAACCCCAATGATTACCGTTGAAACCTTAAACACCTTGGAACCACAGATAATCAAAGTTCCAGCTCTGAAAcagaattatgaaaatgtaatgatggtcaAAAAGGTGAATAATCGGTCAAATGTTGATGAAAAAGTGGAAATGATGCTACAATTGTATTTGAAATACAAGAAAAACTTTCAAGCAGAGTACTGGAGACGGGGCATTTGGGAGACCATTGCTTTAGAGATAGGAGAAGATGATGGAGAATACTGGCAGAAACGGTTCTTAAACTACAAGCAACATTACCTAAGACTGATTGACAAAAGACGAGAAAGCGGCTCAGAAGGCATCAACTGGCCTTACCTGGAACTATTTGACAAAATCTTCGAAGGTGACGAGGACTTCCACAGAAAATATCTGACCGATGAGTACAGATTGATTGAAAAACAGGCGATAGCTGAAGTTGAAGAGCCGCCTCCTAAAGTCGAAGATTGGGACACAACAGAAATGACAGTATTAGTAAAATACTGTTTTGATTGCTTTGATGAATTTCAAGACAAAACCATTCCCAACAATTTCCTTTGGAACGAAATTGGCCGTTTACTTGACAAGACAGCTGAAACATGTAAAACTAAATATGAAGAACTGAAGAACACACATTTAGACAAATACATTGAAGGTGGTTATGACTTAAGAAACAGAAAACCCATTGCAATTCTATTTGACAATATAATATCTAAAGAAAttgagaataaaataataaaaagtggcCGAAAGCCTGAGCCACTGGAGATTTGGAAGACGGAGGAATTGGATGAGCTAGTACAGTTTTTTTATGACAACATAGAAATGTATAAAGATATGATATGCCACTTTGTATGCTGGGCAGGGGTTACCAGAAAGCTGAACAGAAGTCTTCCAAGTTGCAGAAGTCAATGGGAAGACCTATTAAGTCTTTACAAGACAATATTGaatgataagaaagaaaatCCTGATATGCAAATAGATTGGAGATACATTGAAGTCTTTGATAGAATATTTGACTATGGCATGGATACTAGCTTGCTTTCTGGGTATGAAACCTTGAAAGGTTTTGTACAGAATCAGAAAAATGATACAAAAATTGGTGTAAAGAAAGTAAACATCAAATTAGACGAGGATATGGAAGAATTTACTGACGATGAAGAATCATACGACGAACGAGGCTTCACAAAGCGCACAAAACGCCGCTCGGGAGACTCTAAAGCGTTCAAAATCCTCGAATACTAccagaaaaataaagataagtTCTCCACAACCACAAATAGAAACAAACATTCTCTATGGGACATACTCGCTAAACAAATAGGCATATCTGCCACTCAATGCGCACATCGATTCAGAAATTTAAAGCAAGTGTACACTGCTTACGTCCAAAGAGAAATCAGTAAACCAGAAATGCCAATCCTTTGGCCTTACTATGCTCTATGCAAAAAAGTATTTGGCTACAGAGCAATAAAATCTAAACTAAAGAATGGAAAATTGGACTCCGATGACAGCGAAGACTGGTCAgcgaaagaaataaaacaattaataaactaTTTTGCTCAAAATTTCGATGATATCAACAGTAATATTGAAGACAAAACCAAATGGACGGACTTAGCAGGCGAAATTGGCAAAGGTGAGAATTCTTGCAAGGAAAAGTTCATAGAACTGAGAAAGTCTTACAGAAAATTGAAAACTATGAGGAGTAGGAACCCTGAAACAAAGATATCTTGGAAATATTTCAATATGtttgaagatatttttaatGCGAGGGAGAATGGTGTGGAGACAATGGAAGTGGATGAGATGACGTATATGGAGATACCTGCGGCTTCTGACGAAAAGATTGAGCAAGAAGAAGACCAAGACGACTACCAATGCATCATCGTTATCCCAGAGGGTCAAGATATATCCCAGATCGAGAACGCCCGAATCATTATACAAGAAAATCCAATGGCCCAAGAAGAAACCGTCACCACAGAACCACCAAAGGAGACACTCAAACCACTCGTCAAATGGACGAAGAGAACCAAAAAGAAGTTACTTATCTTCTACATAAACTATATCAGAACACATAAGGGTAAAGAAATTAATGCCAAAGATATGTGGGCAGAAATAGCTTCAAAATTACCCAATAAGACACCATTGTCTTGTAGAAAAATGTTTGCCAAACTGAAGGCAAATCATAAGCAAATTGATGTACTAGACCCTAATATGAAGAAAACACCGTATTTCGTGTTAATGGAGAAAGTAATGCGTTTAAAGCCCAAATTCACTAAAACCGAGCAAAATAAGGCTTTAAAGGATGGAAAAGTGTACAAAGATGTACTTCTACCTGACGATAAAGTGGTCCAAGCATTGCAGTACTATTTAGAAAATATTGAAGACTTTGTCAGCCCAAGATTCGAGAAGAAATACCTTTGGACTGAACTTGCCAATTATGTTTGCGAACCAATTACTAAAGTGTTCAACAAAATCAACTATTTAAAACAGGCTTATAACATTGATACGGATGAAGTCGCAGGCGTAAAGACGCCATTTGCagaatttttaaaagaaatcttcGCTAAGGAAATAGCAATAAAGCTTGTCTTAGAAAATCAGCCAAAACCAGTGATTGAAGAACCAGGAGTTGAAGAAACCTGGTCTGATGAAGAGACAGAACAGTTATTGGAATGGTATCTAAGTAATTTAGATAAATTCAAGAACCCTAAATTCGTCAGATCCTATCTATGGATGGAAGTTTCAGGCATGCTACATAAAAGCGCCATTACTTGCTCAAAGAAAATGTCGGAAATTCGTACTCAGTATAGAAATATGGTCAGAGAAAGACCTGAGGAGTTGAATGAGTGGAGATTCCTAGATCTTTGTCAGAAAATTTATGGGACGGGCAAGAAAGGTACTCCGATGAATCctgataattaa
Protein Sequence
MEGSIVVKTEMGSNGEILLFYVDENGGNEEGVLTTVESIEDQAIQLQQDNSYIIQDDGDDSNEIRIDQANLREKWTEDDTKRLLVFYNDNKQAFISGATKKKHLWTVACKTMLVGKNPNSCESKLNSLQEKYNEICGHIQKGVYVKWPYFELCHQIFHDETPMITVETLNTLEPQIIKVPALKQNYENVMMVKKVNNRSNVDEKVEMMLQLYLKYKKNFQAEYWRRGIWETIALEIGEDDGEYWQKRFLNYKQHYLRLIDKRRESGSEGINWPYLELFDKIFEGDEDFHRKYLTDEYRLIEKQAIAEVEEPPPKVEDWDTTEMTVLVKYCFDCFDEFQDKTIPNNFLWNEIGRLLDKTAETCKTKYEELKNTHLDKYIEGGYDLRNRKPIAILFDNIISKEIENKIIKSGRKPEPLEIWKTEELDELVQFFYDNIEMYKDMICHFVCWAGVTRKLNRSLPSCRSQWEDLLSLYKTILNDKKENPDMQIDWRYIEVFDRIFDYGMDTSLLSGYETLKGFVQNQKNDTKIGVKKVNIKLDEDMEEFTDDEESYDERGFTKRTKRRSGDSKAFKILEYYQKNKDKFSTTTNRNKHSLWDILAKQIGISATQCAHRFRNLKQVYTAYVQREISKPEMPILWPYYALCKKVFGYRAIKSKLKNGKLDSDDSEDWSAKEIKQLINYFAQNFDDINSNIEDKTKWTDLAGEIGKGENSCKEKFIELRKSYRKLKTMRSRNPETKISWKYFNMFEDIFNARENGVETMEVDEMTYMEIPAASDEKIEQEEDQDDYQCIIVIPEGQDISQIENARIIIQENPMAQEETVTTEPPKETLKPLVKWTKRTKKKLLIFYINYIRTHKGKEINAKDMWAEIASKLPNKTPLSCRKMFAKLKANHKQIDVLDPNMKKTPYFVLMEKVMRLKPKFTKTEQNKALKDGKVYKDVLLPDDKVVQALQYYLENIEDFVSPRFEKKYLWTELANYVCEPITKVFNKINYLKQAYNIDTDEVAGVKTPFAEFLKEIFAKEIAIKLVLENQPKPVIEEPGVEETWSDEETEQLLEWYLSNLDKFKNPKFVRSYLWMEVSGMLHKSAITCSKKMSEIRTQYRNMVRERPEELNEWRFLDLCQKIYGTGKKGTPMNPDN*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00771874;
90% Identity
iTF_01531969;
80% Identity
-