Basic Information

Gene Symbol
-
Assembly
GCA_950022335.1
Location
OX465502.1:5752927-5757808[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 7 0.33 4.8e+02 2.1 0.9 1 43 72 126 72 129 0.53
2 7 0.029 43 5.5 0.0 21 44 344 368 336 370 0.86
3 7 0.19 2.8e+02 2.9 0.0 13 45 432 469 421 470 0.73
4 7 0.0068 10 7.5 0.2 22 46 590 617 570 617 0.76
5 7 0.0004 0.59 11.5 0.2 3 44 668 718 666 720 0.80
6 7 7.1e-06 0.011 17.0 0.2 13 42 862 898 847 902 0.79
7 7 0.063 92 4.4 0.1 3 15 1057 1069 1055 1116 0.88

Sequence Information

Coding Sequence
ATGGAGGGTTCAATAGTGGTGAAAACTGAGATGGGGTCCAATGGAGAAATACTGCTTTTCTATGTTGATGAAAACGGTGGTAATGAAGAAGGAGTATTAACAACAGTTGAAAGTATAGAAGACCAAGCCATACAACTGCAACAAGATAACTCCTATATCATTCAAGATGATGGAGACGATTCAAATGAAATAAGGATTGATCAAGCCACCCTAAGAGAAAAGTGGACTGAGGATGACACCAAAAGACTACTTGTATTCTACAATGATAACAAACAGGCTTTTATATCCGGAGCAACGAAAAAGAAACATCTCTGGACTGTAGCATGCAAGACCATGCTTGTCGGGAAAAATCCAAACTCATGCGAATCAAAACTCAATAGCTTACAAGAAAAGTACAATGAAATCTGTGGTCACATACAGAAAGGAGTCTACGTAAAGTGGCCATACTTTGAACTATGTCACCAAATATTCCACGATGAAACCCCAATGATAACGGTTGAAACGTTAAACACACTGGAACCACAGATAATCAAAGTTCCAGCTCTGAAACAGAATTATGATAATGTAATGATGGTAAAAAAGGTGAATAACCGGTCAAATGTTGATGAAAAAGTGGAAATGATGCTAAAATTGTATTTGAAATACAAGAAAAACTTCCAAGCAGAGTACTGGAGACGGGGCATTTGGGAGACCATTGCTTTAGAGATAGGAGAAGATGACGGAGAATACTGGCAGAAACGGTTCTTGAACTACAAGCAACATTACCTAAGACTGATTGACAAAAGACGAGAAAGCGGCTCAGAAGGCATCAACTGGCCCTACCTGGAACTATTTGACAAAATCTTTGAAGGTGACGAGGACTTCCATAGAAAATATCTGACCGATGAGTACAGATTGATTGAAAACCAGGCGATAGCTGAAGTTGAAGAGCCGCCTCCTAAAGTCGAAGATTGGGACACAACAGAAATGACAGTATTAGTCAAATACTGTTTTGATTGCTTTGATGAATTTCAAGACAAAACCATTCCCAACAATTTCCTTTGGAACGAAATTGGCCGTTTACTTGACAAGACTGCAGAAACCTGCAAAACTAAATATGAAGAACTGAGGAACGCACATTTAGACAAATACATTGAAGGTGGTTATGACTTAAGAAATAGAAAACCCATTGCAATTCTTTTTGACAATATAATATCTAAAGAAATTGagaatcaaataataaaaagtggcCGAAAGTCTGAGCCACTGGAGATATGGAAGACAGACGAATTGGATGAGCTAGTACAATTTTTCTATGACAACATTGAAATGTATAAAGATATGATATGCCACTTTGTATGCTGGGCAGGGGTTACCAGAAAACTGAACAGAAATCTACCAAGTTGCAGAAGTCAATGGGAAGACCTATTAAGTCTCTACAAGACAATATTGAATGATAAGAAAGAAAATCCTGATATGCAAATAGATTGGAGATACATTGAAGTCTTTGATAGAATATTTGACTATGGCATGGATACTAGCTTGCTTTCTGGGTATGAAACCTTGAAAGGTTTTGGACAGAATCAGAAAAATGATACAAAAATAGGTGTAAAGAAAGTAAACATCAAATTAGATGATGATATGGAAGAATTTACTGACGATGAAGAATCATACGACGAACGAGGCTTCACAAAGCGCACAAAACGTCGCTCAGGAGACTCTAAAGCGTTCAAAATCCTCGAATACTACcagaaaaataaagataagtTCTCCACAACcacaaatagaaacaaacattCTCTATGGGACATACTCGCTAAACAAATAGGCATATCTGCCACTCAATGCGCACACCGATTCAGGAATTTGAAGCAAGTGTATACTGCTTACGTCCAAAGAGAAATTAGCAAACCTGAAATGCCAATTCTTTGGCCTTACTACGCTCTATGCAAAAAAGTATTTGGCTACAGAGCAATCAAATCTAAACTTAAGAATGGAAAATTAGATTCCGATGACAGCGAAGACTGGTCAgcgaaagaaataaaacaattaataaactatttCGCACAAAATTTCGATGATATCAACAGTAATATTGAAGACAAAACCAAATGGACGGATTTAGCCGGCGAAATTGGCAAAGGCGAGAATTCTTGCAAGGAAAAGTTTATAGAACTGAGAAAGTCTTACAGAAAACTGAAAACTATGAGGAGCAGAAACCCTGAAACAAAGATATCTTGGAAATATTTCAATATGTTTGAAGATATTTATAATGCGAGGGAGAATGGCGTGGAGACAATGGAGGTGGATGGTAATGAAGTGACGTATATGGAGATACCTGCGGCTTCTGATGAAAAGATTGAGCAAGAAGAAGACCAAGACGACTACCAATGCATCATCGTTATCCCCGAGGGTCAAGATATATCCCACATCGAGAACGCACGAATCATAATACAAGAAAATCCGTCCCAAGAAGAAACCGTCAGCACAGAACCACCAAAAGAGACACTCGAAGAAACCTTCAGCACAGAACCACCAAAAGAGACACTCAAACCACTCGTCAAATGGACGAAAAGAACCAAAAAGAAGTTAGTTATCTTCTACATAAACTATATCAGAACACATAAGGGTAAAGAGATTAATGCCAAAGATATGTGGGCAGAAATAGCTTCAAAATTACCCAATAAAACACCATTGTCTTGTAGAAAAATGTTTGCCAAACTCAAGGCAAATCATAAGCAAATTGATGTACTAGACCCTAATATGAAGAAAACACCTTATTTCGCGTTAATGGAGAAAGTAATGCGTCTAAAACCTAAATACGCTAAAACCGAGCAGAATAAGGCTTTAAAGGATGGAAAAGTGTacaaagatgtagttttacctGACGATAAAGTGGTCCAAGCATTGCAGTACTATTTAGAAAACATAGAAGATTTTGTCAGCCCTAGATTCGAGAAGAAATACCTTTGGACTGAACTTGCCAATTATGTCTGCGAACCAATAACTAAAGTGTTcaacaaaataaactatttaaaacaaGCTTATAACATGGATACGGATGAAGTCGCAGGCGTAAAGACGCCATTTGCAGAATTCTTAAAAGAAATCTTCGCTAAAGAAATAGCTATAAAGCTTGTATTAGAAAATCAGCCAAAACCTGTCATTGAAGAGCCGGGAGTTGAAGAAACCTGGTCTGATGAAGAGACCGAACAGTTACTGGAATGGTATCtaagtaatttagataaattcaAAAACCCTAAATTCGTGCGATCCTACCTATGGATGGAAGTTTCAGGTATGCTTAATAAAAGCGCCATTACTTGCTCAAAGAAAATGTCGGAAATTCGAACTCAGTATAGAAATATGGTCAGAGAAAGACCTGAAGAGCTGAATGAGTGGAGATTCTTAGATCTTTGTCAGAAAATCTATGGGACTGGCAAGAAAGGTACTCCGATGAatagtaattaa
Protein Sequence
MEGSIVVKTEMGSNGEILLFYVDENGGNEEGVLTTVESIEDQAIQLQQDNSYIIQDDGDDSNEIRIDQATLREKWTEDDTKRLLVFYNDNKQAFISGATKKKHLWTVACKTMLVGKNPNSCESKLNSLQEKYNEICGHIQKGVYVKWPYFELCHQIFHDETPMITVETLNTLEPQIIKVPALKQNYDNVMMVKKVNNRSNVDEKVEMMLKLYLKYKKNFQAEYWRRGIWETIALEIGEDDGEYWQKRFLNYKQHYLRLIDKRRESGSEGINWPYLELFDKIFEGDEDFHRKYLTDEYRLIENQAIAEVEEPPPKVEDWDTTEMTVLVKYCFDCFDEFQDKTIPNNFLWNEIGRLLDKTAETCKTKYEELRNAHLDKYIEGGYDLRNRKPIAILFDNIISKEIENQIIKSGRKSEPLEIWKTDELDELVQFFYDNIEMYKDMICHFVCWAGVTRKLNRNLPSCRSQWEDLLSLYKTILNDKKENPDMQIDWRYIEVFDRIFDYGMDTSLLSGYETLKGFGQNQKNDTKIGVKKVNIKLDDDMEEFTDDEESYDERGFTKRTKRRSGDSKAFKILEYYQKNKDKFSTTTNRNKHSLWDILAKQIGISATQCAHRFRNLKQVYTAYVQREISKPEMPILWPYYALCKKVFGYRAIKSKLKNGKLDSDDSEDWSAKEIKQLINYFAQNFDDINSNIEDKTKWTDLAGEIGKGENSCKEKFIELRKSYRKLKTMRSRNPETKISWKYFNMFEDIYNARENGVETMEVDGNEVTYMEIPAASDEKIEQEEDQDDYQCIIVIPEGQDISHIENARIIIQENPSQEETVSTEPPKETLEETFSTEPPKETLKPLVKWTKRTKKKLVIFYINYIRTHKGKEINAKDMWAEIASKLPNKTPLSCRKMFAKLKANHKQIDVLDPNMKKTPYFALMEKVMRLKPKYAKTEQNKALKDGKVYKDVVLPDDKVVQALQYYLENIEDFVSPRFEKKYLWTELANYVCEPITKVFNKINYLKQAYNMDTDEVAGVKTPFAEFLKEIFAKEIAIKLVLENQPKPVIEEPGVEETWSDEETEQLLEWYLSNLDKFKNPKFVRSYLWMEVSGMLNKSAITCSKKMSEIRTQYRNMVRERPEELNEWRFLDLCQKIYGTGKKGTPMNSN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00771874;
90% Identity
iTF_01531969;
80% Identity
-