Basic Information

Gene Symbol
-
Assembly
GCA_947578425.1
Location
OX387981.1:6394361-6400315[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 7 0.3 3.3e+02 2.1 0.6 1 43 70 124 70 127 0.52
2 7 0.024 27 5.6 0.0 21 44 342 366 334 368 0.86
3 7 0.062 70 4.3 0.2 13 45 430 467 417 468 0.73
4 7 0.006 6.7 7.5 0.2 22 46 588 615 568 615 0.76
5 7 0.00026 0.29 11.9 0.3 3 44 666 716 664 718 0.83
6 7 0.00046 0.52 11.1 0.2 13 42 848 884 834 888 0.86
7 7 0.055 62 4.4 0.1 3 15 1043 1055 1041 1102 0.88

Sequence Information

Coding Sequence
ATGGAGGGTTCAATAGTAGTAAAAACTGAGATGGGGTCCAATGGAGAAATACTGCTTTTCTATGTTGATGAAAACGGTGGTAATGAAGAAGGAGTATTAACAACAGTTGAAAGTATAGAAGACCAAGCCCTACAACTGCAACAAGATAACTCCTATATCATTCAAGATGATGGAGATGATTCAAATGAAATAAGAATTGAGACCTTAAGAGAAAATTGGACTGAGGACGACACCAAAAGACTACTTGTGTTCTACAATGATAACAAACAAGCTTTTATATCCGGAGCAACGAAAAAGAAACATCTCTGGACCGTAGCATGCAAGACCATGCTTGTCGGGAAAAATCCAAACTCATGCGAATCAAAACTCAACAGCTTACAAGAAAAGTACAATGAAATCTGTGGTCACATACAGAAAGGAGTCTACGTAAAGTGGCCATACTTTGAACTATGCCACCAAATATTCCACGATGAAACCCCAATGATTACGGTTGAAACTTTAAACACACTGGAACCACAGATAATCAAAGTTCCAGCTCTGAAACAGAATTACGATAATGTAATGATGGTAAAGAAGGTGAATAATCGGTCAAATGTTGATGAAAAAGTGGAAATGATGCTAAAATTGTATTTGAAATACAAGAAAAACTTCAAAGCAGAGTACTGGAGACGGGGAATTTGGGAGACCATTGCTTTAGAGATTGGAGAAGATGACGGAGAATACTGGCAGAAACGGTTCTTGAACTACAAGCAACACTACTTAAGACTGATTGACAAGAGACGACAAAGTGGTTCAGATGGCATCAACTGGCCCTACCTGGAACTATTTGACAAAATCTTCGAAGGTGACGAGGACTTCCATAGAAAATATCTCACCGATGAGTACAGATTTATTGAAAACCAGGCGATAGCAGAAGTTGAAGAGCCGCCTCCTAAAGTCGAAGATTGGGACACAACAGAAATGACAGTATTAGTTAAATACTGTTTTGATTGCTTTGATGAATTTCAAGACAAAACCATCCCCAACAATTTCCTATGGAACGAAATTGGCCGTTTACTTGACAAGACTGCAGAAACCTGCAAAACTAAATATGAAGAACTGAAGAACGCACATTTAGACAAATACATTGAAGGTGGTTATGACCTAAGAAACCGAAAACCCATTGCAATTCTTTTTGACAATATAATATCTAAAGAAATAGAGAATCAGATAATAAAAAGTGGCCGAAAGCCTGAGCCATTGGAGATGTGGAAGACAGATGAATTGGATGAGCTAGTACAATTTTTCTATGACAATATAGAAATGTATAAAGATATGATATGCCACTTTGTGTGCTGGGCAGGGGTTACCAGAAAGCTGAAAAGAAATCTTGCAAGTTGCAGAAGTCAATGGGAAGACCTATTAAGTCTCTACAAGACAATATTGAATGATAAGAAAGAAAATCCTGATATGCAAATAGATTGGAGATACATTGAAGTCTTTGATAGAATATTTGACTATGGCATGGATACAAGCTTGCTTTCTGGGTATGAAACCTTGAAAGGATTTGGACAGAATCAGAAAAATGATACAAAAATTGGTGTAAAGAAAGTGAACATCAAATTAGACGAGGATATGGAAGAATTTACTGACGATGAAGAATCATTCGACGAACGAGGCTTCACAAAGCGCACAAAACGTCGCTCAGGAGACTCTAAAGCGTTCAAAATCCTCGAATACTACCAGAAAAACAAAGATAAGTTCTCCACAACCACAAATAGAAACAAACATTCTCTATGGGACATACTCGCTAAACAGATAGGCATATCTGCCACCCAATGCGCACACCGATTCAGGAATTTAAAGCAAGTGTACACTGCTTACGTCCAAAGAGAAATAAGCAAACCTGAGATGCCAATTCTATGGCCTTACTACGCTCTATGCAAAAAAGTATTTGGTTATAGAGCAATCAAATCTAAACTTAAGAACGGAAAATTGGATTCCGATGACAGCGAAGACTGGTCAGCGAAAGAAATAAAACAGTTAATAAACTATTTCGCTCAAAACTACGATGATATCAACAGTAATATTGAAGACAAAACCAAATGGACGGAATTAGCGGGCGAAATAGGCAAAGGCGAGAATTCTTGCAAGGAAAAGTTTATAGAACTGAGAAAGTCTTACAGGAAATTGAAAACTATGAGAAGCAGGAACCCTGAAACAAAGATATCTTGGAAATATTTCAATATGTTTGAAGATATTTTTAATGCGAGGGAAAATGGTGTGGAGACACTGGAGGTGGATGGTAATGAAGTGACGTATATGGAGATACCTGCGGCTTCTGATGAAAAGATTGAGCAAGAAGAAGACCAAGACGACTACCAATGCATCATCGTTATCCCGGAGGGTCAAGATATATCCCAGATCGAGAACGCACGAATCATAATACAAGAAAATCCAACGACCCAAGAAGAAACCGTCACCACAGAACCACTAACGGAGACACTCAAACCACTCGTCAAATGGACGAAGAGAAGCAAAAAGAAGGTACTTATCTTCTACATAAACTACATCAGAACACATAAGGGTAAAGAGATTAATGCCAAAGAGATGTGGGCAGAAATAGCTTCAAAATTACCCATTAAGACACCATTGTCTTGTAGAAAAATGTTTGCCAAACTGAAGGCAAATCATAAGCAAATTGATATACTAGACCCTAATATGAAGAAAACACCTTATTTCGCGTTAATGGAGAAAGTAATGCGTTTAAAGCCCAAATTCACTAAAACCGAGCAAAATAAGGCTTTAAAGGATGGGAAAGTGTACAAAGATGTAGTTCTACCTGATGATAAAGTGGTCCAAGCATTGCAGTACTATTTAGAAAATATTGAAGACTTTGTCAGCCCTAGATTCGAGAAGAAATACCTTTGGACTGAACTTGCCAATTACGTTTGTGAGCCAATTACTAAAGTGTTCAACAAAATCAACTATCTAAAGCAAGCTTATAACATGGATACAGATGAAGTCGCAGGCGTAAAGACGCCATTTGCAGAATTCTTAAAAGAAATCTTCGCTAAAGAAATAGCTATAAAGCTCGTGTTAGAAAATCAGCCAAAACCAGTGATTGAAGAGCCGGGAGTTGAAGAAACCTGGTCTGATGAAGAGACGGAACAGTTATTGGAATGGTACCTAAGTAATTTAGATAAATTCAAGAACCCTAAATTCGTCAGATCTTATCTATGGATGGAAGTTTCAGGCATGCTAAATAAAAGCGCCATTACTTGCTCAAAGAAAATGTCGGAAATTCGAACTCAGTATAGAAATATGGTCAGAGAAAGACCAGAGGAGTTGAATGACTGGAGATTCCTGGATCTTTGTCAGAAAATCTATGGGACTGGCAAGAAAGGTACTCCGATGAATAGTAATTAA
Protein Sequence
MEGSIVVKTEMGSNGEILLFYVDENGGNEEGVLTTVESIEDQALQLQQDNSYIIQDDGDDSNEIRIETLRENWTEDDTKRLLVFYNDNKQAFISGATKKKHLWTVACKTMLVGKNPNSCESKLNSLQEKYNEICGHIQKGVYVKWPYFELCHQIFHDETPMITVETLNTLEPQIIKVPALKQNYDNVMMVKKVNNRSNVDEKVEMMLKLYLKYKKNFKAEYWRRGIWETIALEIGEDDGEYWQKRFLNYKQHYLRLIDKRRQSGSDGINWPYLELFDKIFEGDEDFHRKYLTDEYRFIENQAIAEVEEPPPKVEDWDTTEMTVLVKYCFDCFDEFQDKTIPNNFLWNEIGRLLDKTAETCKTKYEELKNAHLDKYIEGGYDLRNRKPIAILFDNIISKEIENQIIKSGRKPEPLEMWKTDELDELVQFFYDNIEMYKDMICHFVCWAGVTRKLKRNLASCRSQWEDLLSLYKTILNDKKENPDMQIDWRYIEVFDRIFDYGMDTSLLSGYETLKGFGQNQKNDTKIGVKKVNIKLDEDMEEFTDDEESFDERGFTKRTKRRSGDSKAFKILEYYQKNKDKFSTTTNRNKHSLWDILAKQIGISATQCAHRFRNLKQVYTAYVQREISKPEMPILWPYYALCKKVFGYRAIKSKLKNGKLDSDDSEDWSAKEIKQLINYFAQNYDDINSNIEDKTKWTELAGEIGKGENSCKEKFIELRKSYRKLKTMRSRNPETKISWKYFNMFEDIFNARENGVETLEVDGNEVTYMEIPAASDEKIEQEEDQDDYQCIIVIPEGQDISQIENARIIIQENPTTQEETVTTEPLTETLKPLVKWTKRSKKKVLIFYINYIRTHKGKEINAKEMWAEIASKLPIKTPLSCRKMFAKLKANHKQIDILDPNMKKTPYFALMEKVMRLKPKFTKTEQNKALKDGKVYKDVVLPDDKVVQALQYYLENIEDFVSPRFEKKYLWTELANYVCEPITKVFNKINYLKQAYNMDTDEVAGVKTPFAEFLKEIFAKEIAIKLVLENQPKPVIEEPGVEETWSDEETEQLLEWYLSNLDKFKNPKFVRSYLWMEVSGMLNKSAITCSKKMSEIRTQYRNMVRERPEELNDWRFLDLCQKIYGTGKKGTPMNSN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00771874;
90% Identity
iTF_01531969;
80% Identity
-