Basic Information

Insect: Wiebesia pumilae
Gene Symbol: Rreb1
Assembly: GCA_018907045.1
Location: JACCHZ010000149.1:1996506-2003125[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.007 1.8 10.6 0.1 1 23 87 109 87 109 0.96

2 16 0.00029 0.074 15.0 0.1 1 23 125 147 125 147 0.97

3 16 2e-07 5.2e-05 24.9 1.3 1 23 153 176 153 176 0.98

4 16 0.43 1.1e+02 5.0 0.0 1 23 274 298 274 298 0.94

5 16 0.0062 1.6 10.8 2.8 2 23 304 326 304 326 0.95

6 16 1.2 3e+02 3.6 0.5 1 19 382 400 382 402 0.90

7 16 0.059 15 7.7 0.1 1 23 517 539 517 539 0.96

8 16 2.2e-05 0.0057 18.5 0.3 1 23 548 570 548 570 0.98

9 16 0.0011 0.28 13.2 2.8 1 23 576 599 576 599 0.97

10 16 0.0004 0.1 14.5 3.0 1 23 988 1011 988 1011 0.97

11 16 0.00058 0.15 14.0 0.1 3 23 1303 1323 1301 1323 0.97

12 16 0.81 2.1e+02 4.1 6.5 1 23 1329 1352 1329 1352 0.97

13 16 0.0037 0.93 11.5 2.2 1 23 1391 1415 1391 1415 0.97

14 16 4.8 1.2e+03 1.7 2.5 1 23 1532 1555 1532 1555 0.86

15 16 0.0099 2.5 10.2 0.4 2 23 1608 1629 1607 1629 0.94

16 16 1.2 3e+02 3.6 8.2 1 23 1635 1657 1635 1657 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.007	1.8	10.6	0.1	1	23	87	109	87	109	0.96
2	16	0.00029	0.074	15.0	0.1	1	23	125	147	125	147	0.97
3	16	2e-07	5.2e-05	24.9	1.3	1	23	153	176	153	176	0.98
4	16	0.43	1.1e+02	5.0	0.0	1	23	274	298	274	298	0.94
5	16	0.0062	1.6	10.8	2.8	2	23	304	326	304	326	0.95
6	16	1.2	3e+02	3.6	0.5	1	19	382	400	382	402	0.90
7	16	0.059	15	7.7	0.1	1	23	517	539	517	539	0.96
8	16	2.2e-05	0.0057	18.5	0.3	1	23	548	570	548	570	0.98
9	16	0.0011	0.28	13.2	2.8	1	23	576	599	576	599	0.97
10	16	0.0004	0.1	14.5	3.0	1	23	988	1011	988	1011	0.97
11	16	0.00058	0.15	14.0	0.1	3	23	1303	1323	1301	1323	0.97
12	16	0.81	2.1e+02	4.1	6.5	1	23	1329	1352	1329	1352	0.97
13	16	0.0037	0.93	11.5	2.2	1	23	1391	1415	1391	1415	0.97
14	16	4.8	1.2e+03	1.7	2.5	1	23	1532	1555	1532	1555	0.86
15	16	0.0099	2.5	10.2	0.4	2	23	1608	1629	1607	1629	0.94
16	16	1.2	3e+02	3.6	8.2	1	23	1635	1657	1635	1657	0.98

Sequence Information

Coding Sequence: ATGGCGATTCCGCGAGACCGTTTCGTAACACCCTGCAATTGTCCGGACTCCCTCGTCTCTCGTTCTTCTTCTTTCGGTTTTTTTAGCCAGCGTTGCGTTTCTCATCGTCTGCGCTTCGTGAGAAACCCCAAGACCGCGCGTCTCTCGGAAGAAAGCGCAAGCCTGACTGCTGAGACTGGACCCGATCAGCGCGACGACTGCAACGAGAATCAAACGGATGTTGCATCATCACCACTGGTCGACCAGCCGGAAGGTACCCACCCGTGCCCGGCCTGTCCCCTCGTGCTTGCAAGCTCACGCGACCTGACGAATCACCTCCGAGGTCACAATTCACCCCGCAGTATTAGCGACTGCAGCGGCGAGGAGGTCGATTACGCTTGTGGTGTCTGCCATAAGGTTCTTAGCTCTGCAAGTTCTCTGGACCGTCACGTTCTCGTGCATTCAGGAGAGAGACCATTCAAGTGCAAGTATTGCGACATGGCGTTCACCACTAATGGTAACATGAATAGGCACTTGCGCACGGCCCACAGGGCCGTTTCGCCCTCGCACAGCTGCACGGACTCCGAGGGCAGCTGCGACTCCGAGAGGCCGTTGAAGCGCCGGATCATCCAGGAAGAGTACAATAATAACGAGGTCGCCAAGAGGAATTCCCCGGAGTATATTGAACACGGCAAGCGTTCCAGGTCACCTGATCTTATGGGCAAGCGCAAGTGTCCGGACTACGCGGATGAAGTCGAAAACCATCGCAGACATAAGATTCTGCTTAGCAATGCGCGAACGGAAATTCGCGCTGGCTACGCGGAACCTGTGCAGAGCATTTACAATTGCGCCGTCTGCGGCAGACAGGACTTTGCGACGAGCGCCCTTCTTGATGCCCACTTGGAAAGGAGTCACCCGGAGATTCCAGCTAAGTGTGATAACTGCAACCTTTCCTTTAAGAACCACCGAGCGCTCAATCTTCACCGTTTCATGATACACTTTAACGAGCACGGAGCTGCCGCAGTCACTCGGAACCTGCGTAACTCCGTTGTGGGCTTCAACGACCTTACCTTCGTTGACTTTTCGTCCGATAAGTTCCCCGCTATCGCCCGCGCCGTCTGCGAACAGTCGCTCCATCGACCTGCCTCCGGCGAAACTCCCAGGTACCAGTGTTCCAAGTGCTTAAGAGCCTTTCCGTGTCGTTCGGCTTTAGACGCGCACGAGACGGACTGTGGACTGTTACCCATGGATGCAGCTGGTCAGAGGATTCACGACGAGCAGTCTATGAGAGACGATTTCTTCGCCGGCCTCGACCTTCAAAATAAAGCAGCCTTGGCTGAAGCCAAAGAAGGCAAGGATCTCGCCGATATCCAGAGTATCATCTCTGTGACGTCTGGCCCGATCTTACAGAATTTCTCGAGATCGGATACCAGTACCCCGGACAATTGCAAGATCAAGCAGAGCCTCGGATCGTCGGGCTCCTCCGGTACACCCTCCTCGGAGTACCACGAAGAAGAGGCTCAGGACGCGTTCGCGGCTGAATTTAGGAAAATGAAGCTCAAGGGCGAATTCCCGTGTAGGCTCTGCACAGCTGTTTTTCCAAATCTGCGGGCTCTCAAGGGTCATAATCGTGCGCACATGGGTGTCGGTCCAGGCATACCCTATCCTTGTAATATGTGTCCGTACAGCAGCACGGATAAGGCTACATTGGTGAGACATCTGAGATCTCACAATGGCGACAGACCCTACGAATGTTCTCTCTGCAATTACGCCTTCACAACCAAGGCGAACTGCGAGAGGCACGTGAGGAACCGCCATGGCAAACTGTCGCGGGAAGAAATCAAAAGCGTGCTCATTTATCATCCTAGTGAGGATTCGACGAATGACAGTAGTCTGGAGAGAAACTCACCCCGAGGATTGGTGAGAGACGATGTTCGCAAGACCCTCATCTACTCGAACGAGCGGGACGAGGTAGCACCGCAACAATTGCACTATTTGGGAGAGATCAGGATCAAGGAGGAGACGAAACTACGCCAACCGGGACTAACAGGACTACCCGGACTACATGGAGTCGAGGTTAATCAGTACGATAAAAACGACACATTTCCGCGGCCATCGACGATGCAGCCCTTAGAACTTACTTACAGAAACGATGAGTTAGATAAGGTCCAACAAATTAGCATTAAGCACGCGGTTGATGACTTAGATTCGAGGTCTTCGGATGGTAGCGTGTCTCTAGTCAGCGAAACCAAAGCGGACGCACACCAAAGAATTCAAGCTAGCCCGATGGATCTGAAAAAATCGAATGAAACATCAGCTGTGGAGGGTAGCGGTGCTGAAGATACGCCTCTCGATTTGTCCATGGATGTACTTGATCTAAGCAAAAAAGCTACGACTACTGCTGTCGTAGCTATTAAGGATAACGACCCTGGAGACATTAATGGGAATGCCGAGGATCTTAGCGGCAACCATAAGGACTTATATAACACGACTAATCAATTACTACTTACCCAAGCTCTTCTTAAGGCTGGTCAAGTGGGTGTACAACCTTCATCATTAGAGAGCTTCTACGCAAACGCCCACATGATTTACCGTAACTTTGGCACATTTCCTGGTGTTGGAACCGGTATACTTCAACCATATCTCTTTAATCCACATATTTTTAGTCAAGATTTCGCGATGAAAGATCGACTACAGAAGGAATTGGTCCGAGGTCTTCAAACCAGCGGCGGAAGTCTTGTAGAGCCTCCGGCTCCCGGATTCCCAGCGGCATTTCCTCCGGTACGAAATCCTCCACCTAATCACAACGTCAATGAGCAAGCCGAATACGCAAACATCATGTCCTCCAAATTGGTCAATAAAAGTATTTCGCCACGTGACAAAATTGATGCCTCGCCATCGGCAAATTCTGTGAAGATGGTAATCAAGAATGGTGTATTGATGCCGAAGCAGAAACAGCGACGATACAGAACCGAGCGTCCATTCACTTGCGAGCACTGCTCTGCTAGATTCACGTTACGGAGTAACATGGAACGACACATTAAACAGCAGCATCCACAGCATTGGAGTCAACGTCCTAGAGGAGGACACTCAACCAGGGGAAGACCACCGACAAATCCACCCACATTGATACAAAATTTGGGACAGGCTTCCTCTCATCAGCAGATTTCTCAATCTTACTCTAATTTATTGCCAAAGCTTGGTCAATCATTGGCATCGGATTATGGCAAGCATGCAATCTCTGATCAGGTTAAGTACGCCATTTTAGCTCAGCAGTTGAAGGCTAATAAGCACGAAGAAAACGATACTGACGAGGAACTCATCATCGACGAAGAATCAGTTAATCTAGAAAAGGAGATCAGGGAAGGTAGTGCTAAAGAACCGTCGGAGAGAACGCTCAGTCTCTTAAGAGGTAAATTGGAGACTAATATTGACTGTAAAGGACGTGATAACAGCGAACTAAAAGACGCAAAACATTCAAATGAACAAAAAATACAAATTAAAGAAGAAGTTGAAAGTCACGATGAGCCAAAAAGGAATGAGAACAAAATTTCGAAAAAAGTGGATGAATCCGCAGAGTCAGATAACGAAGAGTCAACGAACGAACTTCGACAAAAAGCAATTAAATCGGAAGTGAAAGTGGACATGAAAGAAGAACGCAACGAGAACGAAGATTTGGCGAGTGTTTCTGAAATCTTGGATAACGCATCTCAGCATTATCAACAGTTTCAGTCTCAGTATATGAGCGACGAGGAAGGCTTGGTCGCTTCAACAAGCGATTGTAATCAGTCGGGCAGTGACGAGAAGTCCGATTCGATAAATTCTGCTAATTCGGGCAATTCATCGACTTCAAAAAAGAAGAAAAAGATAAAGAAGAAGAAGAAGAAGAAGAAGTCCGCTTATTCGATGGCACCGAATCGAGTAATCTGCCCTTACTGCGAGCGACCATTCCCCTGGACATCTTCGCTCCGACGGCATATCCTGACACACACTGGACAAAAGCCTTACCAGTGCATGCACTGCTCTCTACTTTTTACGACAAAGTCCAACTGCGATCGTCATTTGTTGAGGAAGCACAAGGCAAATGCAAACAAAATACGACGGGCACGTAGCACATCATCGCCCGAGGCTCAGGAAGCGCCAACCAATAACAACAGCCAGTTCTCTATGAGGAACGTACCAGAGCGGCCATACAAGTGCAATCAATGCCCAAGCTCGACGTTTTCTACACTCGGCAATCTAAAAAAGCACAGATCGACGAAGCACGCACGCAATACTAAATCAAGGCCCGAATCGCCGGCTAGCGAGCCTCGCAACAGTCCTCAACAGAGTTCAAACGAATGCATTCAGGAGTGCCAACAGGAGTGCCCACAAGAGAGTCCTCGAGAAGTCGCTCGAGACCTTATACAGGACTGTCCTAAACAAAACGACCAAAGCGGATACGAAAGTCAGTCGTCAGGAATCTCCGAGAATTTAGAGAACGGCAGTTCGAGAGCCCTCAATACAGCAAAACCACCTGCCATCATTAATAATACACTATTGGCAACAAGCGAGACTTCCAGATCGAGACGAACGTCCCCAAGGTCGTCGCCTGGTCCTAACACCGAGGCACCTTTCAAGTGCCATTTATGTGACAGCGGTTTCGCCGAGAGACAAGACTGCCTTGAACATATTAAGGACAACCACGAGCGGTCCTACGAGATGCTCGTAGCCAAGGGTGCTCTCGATATGGATATCGAGGGTCACGAGGAACAGATGCTACCTGTACCACCGACACCACAACATCCCAGCGACGGCGAAGAGAAACGCGGCCGATTTCCTGACTACAGTAATAGAAAGGTTGTGTGTGCCTTCTGTATGCGTCGTTTCTGGTCGGCCGAGGATTTGCGTCGCCACATGCGCACGCACACTGGCGAACGACCCTTTTCCTGCGATATCTGCTGTCGGCGCTTCACCCTCAAGCACAGTATGCTACGTCACCGCAAGAAGCACGAGTCTGTTGACTCGACGATGTACGTTGGAACGAGCGGCGACGAGGACAACGTCTCGGTCGGATCCATGACCCAGCCACCGACGATAACACCCCGCTCGCAGCACCAGCCGACAAGTACTATGGGTAGCGTATGCTTGCCCCAAGTTGGGAGTGTGGCCACTGGCGATGCCGCTCCGAGCGGTCTCATGCGTTTCAACCCTTACGAAAAACTTACCACCCTCACGGGAAAACTGACAGCGGGGGTGTCATCAAGCCTCGCAGTTGATGCTAACGACAATACTGACAACGATCTTATCTCCAATTTGCTGGGCATCAGGGACAAGAGCATCATCGACCGTGTGCTCCAAGCGTCGGCCGACGACGCGGCCAAACTTCTAGGCGTCAAAGGCAATCACGAATAA
Protein Sequence: MAIPRDRFVTPCNCPDSLVSRSSSFGFFSQRCVSHRLRFVRNPKTARLSEESASLTAETGPDQRDDCNENQTDVASSPLVDQPEGTHPCPACPLVLASSRDLTNHLRGHNSPRSISDCSGEEVDYACGVCHKVLSSASSLDRHVLVHSGERPFKCKYCDMAFTTNGNMNRHLRTAHRAVSPSHSCTDSEGSCDSERPLKRRIIQEEYNNNEVAKRNSPEYIEHGKRSRSPDLMGKRKCPDYADEVENHRRHKILLSNARTEIRAGYAEPVQSIYNCAVCGRQDFATSALLDAHLERSHPEIPAKCDNCNLSFKNHRALNLHRFMIHFNEHGAAAVTRNLRNSVVGFNDLTFVDFSSDKFPAIARAVCEQSLHRPASGETPRYQCSKCLRAFPCRSALDAHETDCGLLPMDAAGQRIHDEQSMRDDFFAGLDLQNKAALAEAKEGKDLADIQSIISVTSGPILQNFSRSDTSTPDNCKIKQSLGSSGSSGTPSSEYHEEEAQDAFAAEFRKMKLKGEFPCRLCTAVFPNLRALKGHNRAHMGVGPGIPYPCNMCPYSSTDKATLVRHLRSHNGDRPYECSLCNYAFTTKANCERHVRNRHGKLSREEIKSVLIYHPSEDSTNDSSLERNSPRGLVRDDVRKTLIYSNERDEVAPQQLHYLGEIRIKEETKLRQPGLTGLPGLHGVEVNQYDKNDTFPRPSTMQPLELTYRNDELDKVQQISIKHAVDDLDSRSSDGSVSLVSETKADAHQRIQASPMDLKKSNETSAVEGSGAEDTPLDLSMDVLDLSKKATTTAVVAIKDNDPGDINGNAEDLSGNHKDLYNTTNQLLLTQALLKAGQVGVQPSSLESFYANAHMIYRNFGTFPGVGTGILQPYLFNPHIFSQDFAMKDRLQKELVRGLQTSGGSLVEPPAPGFPAAFPPVRNPPPNHNVNEQAEYANIMSSKLVNKSISPRDKIDASPSANSVKMVIKNGVLMPKQKQRRYRTERPFTCEHCSARFTLRSNMERHIKQQHPQHWSQRPRGGHSTRGRPPTNPPTLIQNLGQASSHQQISQSYSNLLPKLGQSLASDYGKHAISDQVKYAILAQQLKANKHEENDTDEELIIDEESVNLEKEIREGSAKEPSERTLSLLRGKLETNIDCKGRDNSELKDAKHSNEQKIQIKEEVESHDEPKRNENKISKKVDESAESDNEESTNELRQKAIKSEVKVDMKEERNENEDLASVSEILDNASQHYQQFQSQYMSDEEGLVASTSDCNQSGSDEKSDSINSANSGNSSTSKKKKKIKKKKKKKKSAYSMAPNRVICPYCERPFPWTSSLRRHILTHTGQKPYQCMHCSLLFTTKSNCDRHLLRKHKANANKIRRARSTSSPEAQEAPTNNNSQFSMRNVPERPYKCNQCPSSTFSTLGNLKKHRSTKHARNTKSRPESPASEPRNSPQQSSNECIQECQQECPQESPREVARDLIQDCPKQNDQSGYESQSSGISENLENGSSRALNTAKPPAIINNTLLATSETSRSRRTSPRSSPGPNTEAPFKCHLCDSGFAERQDCLEHIKDNHERSYEMLVAKGALDMDIEGHEEQMLPVPPTPQHPSDGEEKRGRFPDYSNRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDICCRRFTLKHSMLRHRKKHESVDSTMYVGTSGDEDNVSVGSMTQPPTITPRSQHQPTSTMGSVCLPQVGSVATGDAAPSGLMRFNPYEKLTTLTGKLTAGVSSSLAVDANDNTDNDLISNLLGIRDKSIIDRVLQASADDAAKLLGVKGNHE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00309707; iTF_01428560; iTF_01219250; iTF_00464176; iTF_01216980; iTF_00708120; iTF_00708701; iTF_00845405;
90% Identity: -
80% Identity: -