Basic Information

Insect: Chalcis sispes
Gene Symbol: Rreb1
Assembly: GCA_949987625.1
Location: OX465097.1:63919766-63925768[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0094 1.8 10.5 0.0 1 23 35 57 35 57 0.96

2 16 0.00033 0.062 15.0 0.1 1 23 73 95 73 95 0.97

3 16 2.3e-07 4.4e-05 25.0 1.3 1 23 101 124 101 124 0.98

4 16 0.0078 1.5 10.7 0.3 1 23 223 247 223 247 0.96

5 16 0.06 11 7.9 0.9 2 23 253 275 253 275 0.94

6 16 1.4 2.6e+02 3.7 0.5 1 19 331 349 331 351 0.90

7 16 0.068 13 7.8 0.1 1 23 464 486 464 486 0.96

8 16 2.6e-05 0.0048 18.5 0.3 1 23 495 517 495 517 0.98

9 16 0.00035 0.066 15.0 2.5 1 23 523 546 523 546 0.97

10 16 0.00047 0.087 14.6 3.0 1 23 934 957 934 957 0.97

11 16 0.00067 0.13 14.1 0.1 3 23 1241 1261 1239 1261 0.97

12 16 0.94 1.7e+02 4.2 6.5 1 23 1267 1290 1267 1290 0.97

13 16 0.0042 0.79 11.6 2.2 1 23 1329 1353 1329 1353 0.97

14 16 4.3 8.1e+02 2.1 2.5 1 23 1485 1508 1485 1508 0.89

15 16 0.011 2.1 10.2 0.4 2 23 1561 1582 1560 1582 0.94

16 16 1.4 2.5e+02 3.7 8.2 1 23 1588 1610 1588 1610 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0094	1.8	10.5	0.0	1	23	35	57	35	57	0.96
2	16	0.00033	0.062	15.0	0.1	1	23	73	95	73	95	0.97
3	16	2.3e-07	4.4e-05	25.0	1.3	1	23	101	124	101	124	0.98
4	16	0.0078	1.5	10.7	0.3	1	23	223	247	223	247	0.96
5	16	0.06	11	7.9	0.9	2	23	253	275	253	275	0.94
6	16	1.4	2.6e+02	3.7	0.5	1	19	331	349	331	351	0.90
7	16	0.068	13	7.8	0.1	1	23	464	486	464	486	0.96
8	16	2.6e-05	0.0048	18.5	0.3	1	23	495	517	495	517	0.98
9	16	0.00035	0.066	15.0	2.5	1	23	523	546	523	546	0.97
10	16	0.00047	0.087	14.6	3.0	1	23	934	957	934	957	0.97
11	16	0.00067	0.13	14.1	0.1	3	23	1241	1261	1239	1261	0.97
12	16	0.94	1.7e+02	4.2	6.5	1	23	1267	1290	1267	1290	0.97
13	16	0.0042	0.79	11.6	2.2	1	23	1329	1353	1329	1353	0.97
14	16	4.3	8.1e+02	2.1	2.5	1	23	1485	1508	1485	1508	0.89
15	16	0.011	2.1	10.2	0.4	2	23	1561	1582	1560	1582	0.94
16	16	1.4	2.5e+02	3.7	8.2	1	23	1588	1610	1588	1610	0.98

Sequence Information

Coding Sequence: ATGAGGATGACTGCCGAGACTGGACCTGATCAGCGCGACGGCTGCAGCGAGAATCAAACGGATGTTGCATCATCACCACTGGTCGAGCAGCCGGAAGGAACCCACCCGTGCCCGGCTTGTCCGCTCGTACTCCCAAGCTCGCGCGACCTGACGAATCATCTGCGCGGTCACAACTCGCCCCGAAGCACCACTGACTGCAGCGGCGAAGAAGCCGATTACGCCTGCGGCGTTTGCCATAAAGTCCTTAGCTCCGCAAGCTCTCTCGACCGACACGTTCTCGTGCACTCTGGCGAGCGACCTTTCAAGTGCAAATACTGCGACATGGCCTTTACTACTAACGGCAACATGAACAGGCATTTGAGGACTGCGCATAGGACCGTGTCTCCCTCGCACAGCTGCACGGACTCGGAGGGCAGCAGCGACTCAGAGAGACCGCTCAAACGCCGACTCATCCAGGAGGAGTACAATAATAACGAAGTTGCCAAGAGAAACTCTCCAGAGTTACTGGACCGCGAGAAGCGAACCAAGTCACCTAGCGATGTCACGGGCAAACGCAAGTGCCCCGATTACGCTGACGAGGCTGACAGCCAACGTAGGCATAAAATTCTACTTGGAAGCGCGAGAACTGAAATTACGGGCGGATACTCGGAGTTACCACAGAACATCTACAATTGCACGGTATGCGGAAGGCAAGACTTCACCACGAGCGCACTTTTCGAGGCTCACATGGAGAGAAACCATCCCGAAGTTCCCGCCAAGTGCGATGCTTGCAATGTCTCCTTCAAGAATTACCGTGGTCTCAATCTCCATCGCTTCATGAACCACTTCAGCGAACGCGGAAATGCAGCCACGCCTAGAAACCTACGCAACTCCGTTGTTGGATTCAATGATCTAACCTTCGTCGATTTCTCCTCCGACAAGTTTCCTGCGATCGCACGTGCCGTTTGCGAGCAGTCGATCCACCGACCAGCATCCGGAGAAACGCCAAAGTATCAGTGCTCCAAGTGCCTGCGGGCCTTTCCGTGTCGATCGGCACTAGACGCCCACGAGACGGATTGTGGACTGGTACTGCCAACAGACCGAAAGCTGCATGACGATCAGTCGATGAGGGACGACTTTTTTGCCGGTTTGGATTTGCAAAACAAAGCAGCTCTGGCTGAAGCGAAAGAAGGAAAAGATCTTGCAGACATTCAGAGTATTATTTCCGTGACATCGGGTCCAATTCTGCACAACTTTTCCAGATCGGATGCCAGTACTCCGGACAACTGCAAAATTAAGCAAAATTTCGGCTCCTCGGGATCTTCTGGAACTCCATCTTCAGAATACCATGAAGAAGAGGCTCAAGATGCCTTTGCAGCTGAATTTAGAAAGATGAAGTTAAAGGGAGAATTTCCATGCAGACTCTGTACAGCAGTTTTTCCAAATTTAAGAGCTCTCAAAGGTCACAATCGAGCACACATGGGTGTGGGACCTGGAATGCCTTATCCTTGCAACATGTGTCCTTACAGCAGTACAGATAAAGCTACGCTTGTAAGGCATTTGAGGTCTCACAACGGTGACAGACCCTACGAATGTTCTATCTGCAATTATGCTTTTACAACTAAAGCTAATTGTGAAAGGCACGTCAGAAATCGTCACGGAAAATTATCGAGAGAAGAAATTAAAAGTGTATTAATTTATCATCCAAGCGAGGATTCAACGAACGACGGCAGTTTGGAAAGAAGTTCACCTCGTGGATTAATGAGAGACGAAGTTCGCAAGGCTCTCGTTTATCCTAACGAACGCGACGATTTGACCTCACAGCAACTTCATTATCCTGGCGAAATTAGAATCAAGGATGAGACGAAGCTTCGTCAACCAGGACTGCCGGGACTTCACGCAATCGGAGTTAATCACTGTGACAAAAATGACATGTTTCAAAGGCCACCAACAATGCAGCCTTTAGAACTCACCTACAGAAATGATGAACTAGATAAAACCCAACAGATGAAGCATTTAGATGATGATCTTGACTCTAGGTCTTCGGACGGTAGCGTGTCTCTAGTCAGCGAAACCAAAGCGGACGCACACCAAAGAATCCAAGCTAACCCTATCGACCTGAAGAAGTCAAATGCCAATGAAACCTCATCTGCAGAAGGCGGTGCTAGCGAAGAGGCACCTCTCGATCTTTCAATGGATGTGCTCGATCTTAGCAAAAAGGCGTCAGCCGCAGCTGCTACTGCTTTtactgtaaaagaaaaagaaagcagcGACATCAATGGCAACTCCGAAGACCTTACCAGTAATTCCAAAGATTTCTATAATACTACAAATCAATTACTATTAACGCAGGCTCTTCTGAAAGCTGGTCAAGTTAGTGCTCAACAGTCATCGTTAGAAACATTTTACGCAAACGCTCACATGATTTATCGAAACTTTGGTACGTTTTCTGGTGTCGGAGCTGGTATTCTACAACCTTACCTTTTCAATCCACATCTTCTTAGTCAAGATTTTGCAATGAAGGATAGATTACAAAAAGAACTAGTTCGTGGACTTCAGACCAGTGGCGGAAGCCTCGTCGAGCCTCCAGTTCCAGGTTTCGGTGCCGCTTTTTCACAGACACGAAATTCAGTCTCAAATCACAAAGTCAATGATCAAAATGATTACGCCAGTTTGATGTCTTCGAAATTGATGAGTAAAAGTATGCCATCTCGTGAAAAACTTGAATCTTCGCCATCGtcaaactctgtaaaaatggttaTTAAAAATGGTGTGCTCATGccaaaacaaaaacaacgacGATACCGAACCGAAAGACCTTTTACTTGTGAGCATTGCTCAGCTAGATTCACTCTGCGAAGTAATATGGAACGTCATATTAAACAGCAACATCCTCAACATTGGAGCCAAAGACCAAGAGGAGGCCATTCGACTAGGGGAAGGCCGCCAGCAAATCCACCCACGTTGCTACAAAATTTAGGACAGACTTCATCGCATCATCAAATGGCTCAATCGTATTCAACTCTACTACCGAAACTTGGACAATCATTAAACTCAGATTATAGAAAACATGCAATATCTGATCAAGTAAAATACGCTATTTTAGCTCAACAATTAAAAGGTAATAAACCCGATGAAAATGACACCGATGAAGAACTTATTATCGATGAAGAGTCAGCTAATGTAGAAAAAGAATCTAAAGATGCTTCGGCTAAAGAACCTACTGAAAGAACACTTAGTCTTTTGAGAGGTAAATTAGAGGCTAATATTGAGTCTAAAGCAAATGATGATGCAGAAATGAAAGAAGCCAAAATAtccgatgaaattaaaaataaaattaaaaaagaaatagaaaatcacgaagaaaataatgacGAAAGTGAAGCTGTAAAAAAAGCATCAAGCAATGAAGAATCATCGATTAGTCGACAAGAAGCGGTTGTTAAAACAGAAATGCAAGTAGATTTAAATCAAAATGAGAACGAAGATCTGGCAAGTGTGTCCGAAATTTTGGACAATGCGTCTCAGCATTATCAACAATTTCAATCTCAATACATGAGCGATGAGGAAGGCTTAGTTGCTTCCACAAGCGATTGCAATCAATCAGGCAGCGATGAAAAATCAGATTCAATCAATTCTGGCAATTCTGGTAATTCATcaacgtcaaaaaaaaagaaaaaaatgaagaaaaaaaagaagaagaagaagtcagCCTACTCGATGGCGCCAAATAGAGTTATATGTCCTTACTGTGAACGACCGTTCCCATGGACATCGTCTCTTAGGCGACACATATTAACGCACACTGGCCAAAAGCCTTATCAATGCATGCACTGCTCTCTACTTTTCACAACCAAATCAAATTGCGATCGTCATCTACTTAGGAAGCACAAGGGAAGCGTCAATAAAATGCGACGAACTCGCAGCACCTCGTCACCTGAAATTCAAGAACCACCGACAAACAACAACAGCCAGTTTAACATGAGAAACGTACCGGAAAGGCCGTACAAGTGCAATCAGTGTCCTAGCTCAACATTCTCGACATTAGGCAACCTAAAAAAGCACAGATCTACAAAGCACGCGAAGAGCATCAAATCCAGTCCCACTTCTCCGTCCAGCGAAACTCACAACAGCCCTCAGGAATGTCCTCAAGAATATCCTCAAGAATATTCTCAAGAATGTGCCCAAGAATTCCCACAAGAATGCTCTCAAGAATGCCATCAAGAATGTCCCCAAGAATCCACTCAAGAGTGCTCGCAAGAATATCCTCGGGACAGTTCTAAACAAAACGACCAAAGCGGATACGAAAGCCAGTCTTCGGGCGTCTCGGAAAATTTAGAAAACAGTTCGATGCAAAACAACGATacgaaaacattaaataatgcTAACAACACTTCCTCGTCGACCAACGAAATTTCAAGGTCAAGAAGAACTTCGCCGAGATCTTCACCTGGACCAACTACCGAAGTTCCCTTCAAATGTCATCTGTGCGATAGCGGTTTCGCAGAGAGACAAGACTGTTTGGAGCACATTAAAGAAAACCACGAGAGATCCTACGAAATGCTCGTAGCTAAAGGAGCTCTCGACATGGATATCGATGGTCATGACGATCCAATGCCACCTGTGCCACTACCACCTCTGCATCCCAGCGACGGTGAAGAGAGACGCGGAAGATTCCCTGACTACAGCAACcgaaagGTTGTCTGCGCGTTCTGCATGCGTCGTTTCTGGTCGGCCGAGGATCTACGTCGACACATGCGCACTCACACCGGAGAGCGTCCATTTTCCTGCGACATCTGCTGCCGTCGTTTCACCCTAAAACACAGCATGCTACGTCATCGAAAGAAGCACGAGTCGATCGACTCGACCATGTACGTCGGCACGAGCGGCGACGAGGACAGCGCTTCGGTCGCCGCACCCATGACACAGCCGCCCACGATAACGCCGCGCTCGCAACATCAGACCTCGGCTTCGTCGACGGGCAGCGCGAGCAGGTTGCAGGAGCGCACCTCGTTGCCCCAGGTGGCGAGCGTCGCGACCGGCGACGCCGCGCCCAGCGGACTTATGCGATTCAATCCTTACGAGAAGCTAACAACGCTCACCGGTAAACTCACCGCGGGCATGTCATCGAGTTTGAGCGTCGACGCGAACGACAACACCGACAACGATCTCATCTCTAATTTGTTGGGTATCAGAGACAAAAGTATCATAGATCGCGTGCTGCAAGCATCGGCCGATGATGCTGCTAAATTACTAGGCGTCAAGGGAAATAGCGAATGA
Protein Sequence: MRMTAETGPDQRDGCSENQTDVASSPLVEQPEGTHPCPACPLVLPSSRDLTNHLRGHNSPRSTTDCSGEEADYACGVCHKVLSSASSLDRHVLVHSGERPFKCKYCDMAFTTNGNMNRHLRTAHRTVSPSHSCTDSEGSSDSERPLKRRLIQEEYNNNEVAKRNSPELLDREKRTKSPSDVTGKRKCPDYADEADSQRRHKILLGSARTEITGGYSELPQNIYNCTVCGRQDFTTSALFEAHMERNHPEVPAKCDACNVSFKNYRGLNLHRFMNHFSERGNAATPRNLRNSVVGFNDLTFVDFSSDKFPAIARAVCEQSIHRPASGETPKYQCSKCLRAFPCRSALDAHETDCGLVLPTDRKLHDDQSMRDDFFAGLDLQNKAALAEAKEGKDLADIQSIISVTSGPILHNFSRSDASTPDNCKIKQNFGSSGSSGTPSSEYHEEEAQDAFAAEFRKMKLKGEFPCRLCTAVFPNLRALKGHNRAHMGVGPGMPYPCNMCPYSSTDKATLVRHLRSHNGDRPYECSICNYAFTTKANCERHVRNRHGKLSREEIKSVLIYHPSEDSTNDGSLERSSPRGLMRDEVRKALVYPNERDDLTSQQLHYPGEIRIKDETKLRQPGLPGLHAIGVNHCDKNDMFQRPPTMQPLELTYRNDELDKTQQMKHLDDDLDSRSSDGSVSLVSETKADAHQRIQANPIDLKKSNANETSSAEGGASEEAPLDLSMDVLDLSKKASAAAATAFTVKEKESSDINGNSEDLTSNSKDFYNTTNQLLLTQALLKAGQVSAQQSSLETFYANAHMIYRNFGTFSGVGAGILQPYLFNPHLLSQDFAMKDRLQKELVRGLQTSGGSLVEPPVPGFGAAFSQTRNSVSNHKVNDQNDYASLMSSKLMSKSMPSREKLESSPSSNSVKMVIKNGVLMPKQKQRRYRTERPFTCEHCSARFTLRSNMERHIKQQHPQHWSQRPRGGHSTRGRPPANPPTLLQNLGQTSSHHQMAQSYSTLLPKLGQSLNSDYRKHAISDQVKYAILAQQLKGNKPDENDTDEELIIDEESANVEKESKDASAKEPTERTLSLLRGKLEANIESKANDDAEMKEAKISDEIKNKIKKEIENHEENNDESEAVKKASSNEESSISRQEAVVKTEMQVDLNQNENEDLASVSEILDNASQHYQQFQSQYMSDEEGLVASTSDCNQSGSDEKSDSINSGNSGNSSTSKKKKKMKKKKKKKKSAYSMAPNRVICPYCERPFPWTSSLRRHILTHTGQKPYQCMHCSLLFTTKSNCDRHLLRKHKGSVNKMRRTRSTSSPEIQEPPTNNNSQFNMRNVPERPYKCNQCPSSTFSTLGNLKKHRSTKHAKSIKSSPTSPSSETHNSPQECPQEYPQEYSQECAQEFPQECSQECHQECPQESTQECSQEYPRDSSKQNDQSGYESQSSGVSENLENSSMQNNDTKTLNNANNTSSSTNEISRSRRTSPRSSPGPTTEVPFKCHLCDSGFAERQDCLEHIKENHERSYEMLVAKGALDMDIDGHDDPMPPVPLPPLHPSDGEERRGRFPDYSNRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDICCRRFTLKHSMLRHRKKHESIDSTMYVGTSGDEDSASVAAPMTQPPTITPRSQHQTSASSTGSASRLQERTSLPQVASVATGDAAPSGLMRFNPYEKLTTLTGKLTAGMSSSLSVDANDNTDNDLISNLLGIRDKSIIDRVLQASADDAAKLLGVKGNSE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01524201;
90% Identity: -
80% Identity: -