Basic Information

Insect: Kradibia gibbosae
Gene Symbol: RREB1
Assembly: GCA_018907135.1
Location: JACCHX010000005.1:8210451-8217129[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0065 1.2 10.5 0.1 1 23 156 178 156 178 0.96

2 16 0.00034 0.065 14.6 0.2 1 23 194 216 194 216 0.96

3 16 1.9e-07 3.5e-05 24.8 1.3 1 23 222 245 222 245 0.98

4 16 0.006 1.1 10.6 0.0 1 23 344 368 344 368 0.96

5 16 0.019 3.6 9.1 2.7 2 23 374 396 374 396 0.95

6 16 0.88 1.7e+02 3.8 0.5 1 19 452 470 452 472 0.90

7 16 0.054 10 7.6 0.1 1 23 587 609 587 609 0.96

8 16 2.1e-05 0.0039 18.4 0.3 1 23 618 640 618 640 0.98

9 16 0.001 0.19 13.1 2.8 1 23 646 669 646 669 0.97

10 16 0.00037 0.07 14.5 3.0 1 23 1067 1090 1067 1090 0.97

11 16 0.00053 0.1 14.0 0.1 3 23 1394 1414 1392 1414 0.97

12 16 0.74 1.4e+02 4.1 6.5 1 23 1420 1443 1420 1443 0.97

13 16 0.0088 1.7 10.1 1.9 1 23 1482 1506 1482 1506 0.97

14 16 2.8 5.4e+02 2.2 3.3 1 23 1630 1653 1630 1653 0.89

15 16 0.0091 1.7 10.1 0.4 2 23 1707 1728 1706 1728 0.94

16 16 1.1 2e+02 3.6 8.2 1 23 1734 1756 1734 1756 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0065	1.2	10.5	0.1	1	23	156	178	156	178	0.96
2	16	0.00034	0.065	14.6	0.2	1	23	194	216	194	216	0.96
3	16	1.9e-07	3.5e-05	24.8	1.3	1	23	222	245	222	245	0.98
4	16	0.006	1.1	10.6	0.0	1	23	344	368	344	368	0.96
5	16	0.019	3.6	9.1	2.7	2	23	374	396	374	396	0.95
6	16	0.88	1.7e+02	3.8	0.5	1	19	452	470	452	472	0.90
7	16	0.054	10	7.6	0.1	1	23	587	609	587	609	0.96
8	16	2.1e-05	0.0039	18.4	0.3	1	23	618	640	618	640	0.98
9	16	0.001	0.19	13.1	2.8	1	23	646	669	646	669	0.97
10	16	0.00037	0.07	14.5	3.0	1	23	1067	1090	1067	1090	0.97
11	16	0.00053	0.1	14.0	0.1	3	23	1394	1414	1392	1414	0.97
12	16	0.74	1.4e+02	4.1	6.5	1	23	1420	1443	1420	1443	0.97
13	16	0.0088	1.7	10.1	1.9	1	23	1482	1506	1482	1506	0.97
14	16	2.8	5.4e+02	2.2	3.3	1	23	1630	1653	1630	1653	0.89
15	16	0.0091	1.7	10.1	0.4	2	23	1707	1728	1706	1728	0.94
16	16	1.1	2e+02	3.6	8.2	1	23	1734	1756	1734	1756	0.98

Sequence Information

Coding Sequence: ATGATCGCGCGTCCGATATTCAACACCTTGCCATTGGCCAGGCCGACCTCATCCTCCTCTTTCCCGGGCTACTCTCCGCCCGCCTACGTCACTCCCTCTTCTCCACGGGTCACTGCCTACGCCCTGCCGGGGCTCAACCCTTTAGAGCCTAAAGAACTTGCCTTTCTCACGGTGAACTCCTCGGAAGAAGAGCCGAGGCCGCAAACATCCGGCGGCAAGAGGATCGGATGCTGCTGCGGTTCGACCTCGGCTCTTCTTCGCTCGCCTTCTGCTGGACAGATTCGGGATAACTCACGCGACGGAGTTTCAGTTTCTTCTTGTTCGTTTCTCCGCCGCCCCCGCCCTCCCTACGAACCCGCCCGATGCAGCGTGACTGCTGAGACTGGACCTTATCATCGCGACGACTGCAACGAGAGTCAAACGGATGTTGCATCATCACCATTGGTCGAGCAGCCGGAAGGTACACACCCGTGCCCGGCCTGTCCCCTCGTGCTCGCGAGCTCCCGCGACCTGACGAATCACCTGCGAGGGCACAACTCACCCCGCAGCCTCAGCGACTGCAGCGCCGAGGAGGTCGACTTCGCCTGCGGCGTCTGCCACAAGGTCCTCAGCTCGGCGAGCTCCCTCGACCGGCACGTCCTCGTGCACTCGGGCGAGCGGCCCTTCAAGTGCAAGTATTGCGACATGGCCTTCACGACGAACGGCAACATGAACAGGCACCTGCGCACCGCCCACAGGACGCTCTCGCCCTCCCACAGCTGCACCGACTCCGAGGGCAGCTGCGACTCGGAGCGGCCCCTGAAGCGCCGCCTCGTCCAGGAGGAGTACAACAACAACGAGGTCGCCAAGCGCAACTCCCCGGAGATCGTGGCCGAGCGCGGGAAGCAGCCGCGCTCCCAGGAGCTCGGGGGCAAGCGCAAGTGCCCGGACTACGGGGACGAGCTCGAGGGCCACCGTAGGCACAAGATCCTCCTGGGGAGCGCGCGGGCCGAGGTCCGTTCCGGGTACCTCGAGGCCCTCCAGGGCGGCTACAGCTGCCCCGTATGCGGCAGGCAGGACTTCGCGACCAGCGCCCTGCTCGAGGCGCACCTCGAGCGCAGCCACCCGGAGATCCCGGCCAAGTGCGAGAGCTGCAACCTCTCCTTCAAGAACCACCGGGCGCTCAACCTCCACCGCTTCATGATACACTTCAGCGATCACGGGGCCGCGGCAGTCAGTCGCAATCTCCGCAACTCCATAGTAGGCTTCAACGACCTCACCTTCGTCGACTTCTCCTCTGACAAGTTCCCCGCGATAGCCCGGGCCGTCTGCGAGCAGTCGCTCCACCGGCCGGCCTCCGGGGAGACCCCGAGGTACCAGTGCACCAAGTGCCTGCGCGCCTTCCCCTGCCGCTCGGCCCTCGACGCCCACGAGTCCGAGTGCGGGCTCCTGGGCTCCGAGGCGGCCGAGCAGCGGGCGAGCGACGAGCAGTCGACGAGGGACGACTTCTTCGCGGGCCTCGACCTACAGAACAAGGCCGCCCTCGCCGAGGCCAAGGAGGGCAAGGACCTCGCCGACATACAGAGCATCATATCCGTCACCTCGGGCCCCATACTACAGAGCTTCTCGCGCTCCGACGCGAGCACCCCCGACAACTGCAAGATCAAGCAGAGCCTCGGCTCCTCGGGCTCCTCCGGCACCCCCTCCTCCGAGTACCACGAGGAGGAGGCGCAGGACGCCTTCGCCGCTGAGTTCCGCAAGATGAAGCTCAAGGGGGAGTTCCCCTGCCGGCTCTGCACGGCCGTGTTCCCGAATCTCCGGGCGCTCAAGGGCCACAACCGGGCCCACATGGGCGTCGGTCCGGGGATGCCCTACCCCTGCAACATGTGCCCCTACAGCAGCACCGACAAGGCAACCCTCGTGAGGCACCTGCGCTCCCACAACGGGGACCGGCCCTACGAGTGTTCGCTCTGCAACTACGCCTTCACGACCAAGGCCAACTGCGAGAGGCACGTGAGGAACCGCCACGGGAAGCTCTCGAGGGAGGAGATCAAGAGCGTCCTCATCTACCACCCGAGCGAGGACTCGACCAACGACAGCAGCCTCGAGAGGAGCTCGCCCCGGGGCCTCCTCAGGGACGAGGTGAGGAAGACCCTCGTCTACGTGAGCGAGCGGGAGGAGCTCCCGCCTGCCCAGCAGCACCAGCTCCACTACCCCGGAGAGATAAGGATCAAGGACGAGGCCAAGCTCCGGCAGCCGGGGCTGGCCAGCCTAGTCGGGCTCCACGGCCCCGAGCTCGGCGGCCACTACGAGAAGCAGCCCGAGATCTTCCCCCGGCCTACGGCCCTCCAGCCGCTCGAGCTCACCTACAGGGCCGAGGAGCTCGAGAAGGCCCAAAGGTTGGCCGCGAAGCACGCGGAGGACGACCTCGACTCGAGGTCCTCCGACGGCAGCGTGTCTCTAGTCAGTGAAACCAAAGCGGACGCACACCAAAGAATCCAGGCGAGCCCGATGGACTTGAAGAAGCCGAGCGAGGCCCCCGAGGCCGGCCACGCCGAGGACGCGCCCCTCGACCTCTCCATGGACGTCCTCGACCTCAGCAAGAAAGCCACTGCGGTGGCAGCCGCCGCCGCCGCCGCCGCCGCGGCCATGAAGGACCAGGACGCCAGGGACATCAACGGGAACGCGGAGGAACTCGGGGCCAACCACAAAAGCCTCTACAGCACGACGAATCAGCTGCTGCTGACCCAGGCCCTCCTGAAGGCCGGCCAGGTCGGCGGCCAGTCCTCCTCCCTCGAGACCTTCTATGCCAACGCCCACATGATATACCGAAACTTCGGGACCTTCCCGGGGGTAGGGGCTGGCATCCTGCAGCCCTACCTCTTCAATCCGCACCTCTTCAACCAGGACTTCGCCATGAAGGAGCGTCTCCAGAAGGAGCTGGTCCGCGGCCTCCAGACCAGCGGGGGCAGCCTCGTGGAGCCACCGAGCCCCGGCTACCCCGGGCCCTACCCCCCGGTCCGGAACCCCCCGGCCAGTCACGGCCCGAGCGAGTCGGCCGAGTACGGGGGCATCGTCTCGGCGAAGCTGATGAACAAGAGCATCTCGCCCCGGGAGAAGCTCGAGTCCTCGGCCTCGGCCAATTCCGTCAAGATGGTCATAAAAAACGGCGTCCTGATGCCGAAGCAGAAGCAGCGCAGGTACAGGACCGAGCGGCCCTTCACCTGCGAGCACTGCTCCGCGAGGTTCACCCTGCGCAGCAACATGGAGCGACACATAAAGCAGCAGCATCCCCAGCACTGGAGCCAGCGCCCGAGGGGCGGCCACTCGACCAGGGGCCGACCGCCGACCAATCCGCCGACGCTCCTGCAGAATCTGGGCCAGGGCTCCTCTTCCCACCAGTCGATGGCCCAGTCCTACTCGGGCCTCTTGCCGAAGCTCCGACAGTCCCTGCCCTCGGATTACGGGAAGCACGCGATCTCCGACCAGGTGAAGTACGCGATATTGGCCCAGCAGCTCAAGGGCAGCGCCGGCGGCGGCGGCGGCAACAAGCACGAGGAGAACGACACCGACGAGGAGCTCATCATCGACGAGGAGTCCGCGCACTTGGAGAAAGACGGGCGAGAGCCCGCGGCTAAAGAACCATCCGAGCGAACGCTCAGCCTCCTGAGGGGAAAGCTCGAGGCCAACATCGAGTCCAAGGCTCCGGACGAGGGGAGCGCTGCGAAGGAGCCCAAGGGTTCGAGCGAGCATAAGATACGCGTTAAGGAGGAGGTCGACTTGGCCGAAAATGCCAAGTGCTCGGAGAACAAGAATTCGAAGAGGGAGGAGGACTCCGGGGACTCGGACAACGAGGCCGGAGTTAAGGAGTTGAGAAAGGCGGGCGTCAAGTTGGAGGCGAAGCTCGACGTGAAAGTGGAGCAGAACGAGAACGAGGACCTGGCGAGCGTCTCGGAAATATTGGACAACGCGTCCCAGCACTACCAGCAGTTCCAGTCTCAGTACATGAGCGACGAGGAAGGCTTGGTCGCCTCGACGAGCGACTGCAACCAGTCGGGGAGCGACGAGAAGTCCGACTCGATGAATTCCGGCAACTCCGGCAACTCCTCGACCTCCAAGAAGAAGAGGAAGATGATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGTCGGCCTACTCGATGGCCCCGAACCGAGTCATCTGCCCCTACTGCGAGCGTCCCTTCCCCTGGACCTCCTCCCTCAGGCGGCACATCCTCACGCACACCGGACAGAAGCCCTACCAGTGCATGCACTGCTCTCTGCTCTTCACGACCAAGTCCAACTGCGACCGCCACCTGCTGCGCAAGCACAAGGCGAACGCGAACAAGTTGCGCCGGGCCCGAAGCACCTCCTCGCCGGAGGCCCAGGAGCCGACGGTCAACAGCAGCAGCCAGTTCTCGATGAGGAACGTCCCGGAGCGGCCCTACAAGTGCAACCAGTGCCCGAGCTCGACCTTCTCGACCATCGGCAACCTCAAGAAGCACCGCTCGACTAAGCACGCCCGCAACCCCAAGTCCAGGCCGGAGTCGCCCTCGAGCGAGACCCAGAACAGCCCGGAACGCAGCCCGGCCGAGTGCGCCCAGCAGGAGGCCCAGCAGGAGTGCGCCCCGGACTGCCCCCGGGAGCCGCTCCTCGGGCCGGACTTCCCGGGGATGCAGGAGTGCCCCAAGCTGGCCGACCAGAGCGGCTACGAGAGCCAGTCCTCCGGGGGGGACTCGGAGAACCTCGAGGCCGGTCAGGCCGGAGCCCCGGCGGCCGCGAAGCCAGCCCCGGCCCCTGCGGGGCCCGGCCTCCCCGGCGGCCAGGAGCCCTCGAGGTCGAGGCGCCCCTCGCCGAGGTCCTCCCCGGGCCCGACGACCGACGCCCCCTTCAAGTGTCACCTCTGCGACAGCGGCTTCTCCGAGCGGCAGGACTGCCTCGAGCACATAAAGGACAACCACGAGCGCTCGTACGAGATGCTCGTGGCCAAGGGCGCCCTCGACATGGACATAGAGGGCCACGAGGAGCAGATGCCCCCGGCCCTGCCGCCCCAGCCCCAGCAGCCGAGCGACGGGGAGGAGCGCCGCGGCAGGTTCCCGGACTACAGCAACAGAAAGGTCGTCTGCGCCTTCTGCATGCGCCGCTTCTGGTCGGCCGAGGACCTCCGCCGGCACATGCGCACCCACACGGGCGAGCGGCCCTTCTCCTGCGACATCTGCTGCAGGCGCTTCACCCTTAAGCACAGCATGCTGCGCCACCGGAAGAAGCACGAGTCCGTGGACTCGACGATGTACGTCGGGACGAGCGGCGACGAGGACGGGGCCTCGGTCGGGCCGATGGTCCAGCCCCCGACGATAACGCCCCGCTCGTCCCAGCTCCAGGCGGCGAGCAGCGCCGGGAGCGCCTGCCTGCCCCAGCTCGGGAGCGTCGCCACCGGGGACGCCGCCCCCAACTGCCTCATGCGCTTCAACCCCTACGAGAAGCTGACCACCCTCACGGGCAAGCTGACGGCCGGCGTCTCGCCGAGCCTCTCGGTCGACGCCAACGACAACACCGACAACGACCTCATATCCAACCTCCTCGGCATCCGGGACAAGAGCATTATCGACCGCGTCCTCCAGGCCTCGGCCGACGACGCGGCCAAGCTCCTCGGCGTCAAGGGCAACCACGAATAA
Protein Sequence: MIARPIFNTLPLARPTSSSSFPGYSPPAYVTPSSPRVTAYALPGLNPLEPKELAFLTVNSSEEEPRPQTSGGKRIGCCCGSTSALLRSPSAGQIRDNSRDGVSVSSCSFLRRPRPPYEPARCSVTAETGPYHRDDCNESQTDVASSPLVEQPEGTHPCPACPLVLASSRDLTNHLRGHNSPRSLSDCSAEEVDFACGVCHKVLSSASSLDRHVLVHSGERPFKCKYCDMAFTTNGNMNRHLRTAHRTLSPSHSCTDSEGSCDSERPLKRRLVQEEYNNNEVAKRNSPEIVAERGKQPRSQELGGKRKCPDYGDELEGHRRHKILLGSARAEVRSGYLEALQGGYSCPVCGRQDFATSALLEAHLERSHPEIPAKCESCNLSFKNHRALNLHRFMIHFSDHGAAAVSRNLRNSIVGFNDLTFVDFSSDKFPAIARAVCEQSLHRPASGETPRYQCTKCLRAFPCRSALDAHESECGLLGSEAAEQRASDEQSTRDDFFAGLDLQNKAALAEAKEGKDLADIQSIISVTSGPILQSFSRSDASTPDNCKIKQSLGSSGSSGTPSSEYHEEEAQDAFAAEFRKMKLKGEFPCRLCTAVFPNLRALKGHNRAHMGVGPGMPYPCNMCPYSSTDKATLVRHLRSHNGDRPYECSLCNYAFTTKANCERHVRNRHGKLSREEIKSVLIYHPSEDSTNDSSLERSSPRGLLRDEVRKTLVYVSEREELPPAQQHQLHYPGEIRIKDEAKLRQPGLASLVGLHGPELGGHYEKQPEIFPRPTALQPLELTYRAEELEKAQRLAAKHAEDDLDSRSSDGSVSLVSETKADAHQRIQASPMDLKKPSEAPEAGHAEDAPLDLSMDVLDLSKKATAVAAAAAAAAAAMKDQDARDINGNAEELGANHKSLYSTTNQLLLTQALLKAGQVGGQSSSLETFYANAHMIYRNFGTFPGVGAGILQPYLFNPHLFNQDFAMKERLQKELVRGLQTSGGSLVEPPSPGYPGPYPPVRNPPASHGPSESAEYGGIVSAKLMNKSISPREKLESSASANSVKMVIKNGVLMPKQKQRRYRTERPFTCEHCSARFTLRSNMERHIKQQHPQHWSQRPRGGHSTRGRPPTNPPTLLQNLGQGSSSHQSMAQSYSGLLPKLRQSLPSDYGKHAISDQVKYAILAQQLKGSAGGGGGNKHEENDTDEELIIDEESAHLEKDGREPAAKEPSERTLSLLRGKLEANIESKAPDEGSAAKEPKGSSEHKIRVKEEVDLAENAKCSENKNSKREEDSGDSDNEAGVKELRKAGVKLEAKLDVKVEQNENEDLASVSEILDNASQHYQQFQSQYMSDEEGLVASTSDCNQSGSDEKSDSMNSGNSGNSSTSKKKRKMMKKKKKKKKKKSAYSMAPNRVICPYCERPFPWTSSLRRHILTHTGQKPYQCMHCSLLFTTKSNCDRHLLRKHKANANKLRRARSTSSPEAQEPTVNSSSQFSMRNVPERPYKCNQCPSSTFSTIGNLKKHRSTKHARNPKSRPESPSSETQNSPERSPAECAQQEAQQECAPDCPREPLLGPDFPGMQECPKLADQSGYESQSSGGDSENLEAGQAGAPAAAKPAPAPAGPGLPGGQEPSRSRRPSPRSSPGPTTDAPFKCHLCDSGFSERQDCLEHIKDNHERSYEMLVAKGALDMDIEGHEEQMPPALPPQPQQPSDGEERRGRFPDYSNRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDICCRRFTLKHSMLRHRKKHESVDSTMYVGTSGDEDGASVGPMVQPPTITPRSSQLQAASSAGSACLPQLGSVATGDAAPNCLMRFNPYEKLTTLTGKLTAGVSPSLSVDANDNTDNDLISNLLGIRDKSIIDRVLQASADDAAKLLGVKGNHE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01524201;
90% Identity: -
80% Identity: -