Basic Information

Insect: Theocolax elegans
Gene Symbol: Rreb1
Assembly: GCA_026168455.1
Location: CM047428.1:61297492-61305840[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0025 0.92 12.0 0.1 1 23 65 87 65 87 0.96

2 16 0.00028 0.1 15.0 0.1 1 23 103 125 103 125 0.97

3 16 2e-07 7.3e-05 24.9 1.3 1 23 131 154 131 154 0.98

4 16 0.024 8.9 8.9 0.1 1 23 249 273 249 273 0.95

5 16 0.021 7.8 9.1 2.7 2 23 279 301 279 301 0.95

6 16 1.1 4.3e+02 3.7 0.5 1 19 357 375 357 377 0.90

7 16 0.057 21 7.8 0.1 1 23 490 512 490 512 0.96

8 16 2.2e-05 0.008 18.5 0.3 1 23 521 543 521 543 0.98

9 16 0.0011 0.39 13.2 2.8 1 23 549 572 549 572 0.97

10 16 0.00039 0.15 14.6 3.0 1 23 958 981 958 981 0.97

11 16 0.00056 0.21 14.1 0.1 3 23 1267 1287 1265 1287 0.97

12 16 0.78 2.9e+02 4.2 6.5 1 23 1293 1316 1293 1316 0.97

13 16 0.0035 1.3 11.6 2.2 1 23 1355 1379 1355 1379 0.97

14 16 3 1.1e+03 2.3 3.3 1 23 1495 1518 1495 1518 0.89

15 16 0.0095 3.6 10.2 0.4 2 23 1576 1597 1575 1597 0.94

16 16 1.1 4.2e+02 3.7 8.2 1 23 1603 1625 1603 1625 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0025	0.92	12.0	0.1	1	23	65	87	65	87	0.96
2	16	0.00028	0.1	15.0	0.1	1	23	103	125	103	125	0.97
3	16	2e-07	7.3e-05	24.9	1.3	1	23	131	154	131	154	0.98
4	16	0.024	8.9	8.9	0.1	1	23	249	273	249	273	0.95
5	16	0.021	7.8	9.1	2.7	2	23	279	301	279	301	0.95
6	16	1.1	4.3e+02	3.7	0.5	1	19	357	375	357	377	0.90
7	16	0.057	21	7.8	0.1	1	23	490	512	490	512	0.96
8	16	2.2e-05	0.008	18.5	0.3	1	23	521	543	521	543	0.98
9	16	0.0011	0.39	13.2	2.8	1	23	549	572	549	572	0.97
10	16	0.00039	0.15	14.6	3.0	1	23	958	981	958	981	0.97
11	16	0.00056	0.21	14.1	0.1	3	23	1267	1287	1265	1287	0.97
12	16	0.78	2.9e+02	4.2	6.5	1	23	1293	1316	1293	1316	0.97
13	16	0.0035	1.3	11.6	2.2	1	23	1355	1379	1355	1379	0.97
14	16	3	1.1e+03	2.3	3.3	1	23	1495	1518	1495	1518	0.89
15	16	0.0095	3.6	10.2	0.4	2	23	1576	1597	1575	1597	0.94
16	16	1.1	4.2e+02	3.7	8.2	1	23	1603	1625	1603	1625	0.98

Sequence Information

Coding Sequence: ATGTGTCCCTTAGGCCTGTGCGCCCGGTTTCCCGGAAACTCGCTCGATCGATCTTCCTTATCGGGACGCGGAGAATCGGCCGTGAACCACCACCGAGTGACCGCCGAGACTGGACCCGATCAACGCGACGGTTGCACCGAGAGTCAAACGGATGTTGCATCATCGCAACTGGTTGACCAGCCGGAAGGAACCCACCCGTGCCCGGCTTGCCCACTCGTCCTGACGAGTTCGCGCGATCTGACGAATCACCTACGCGGGCACAATTCACCCCGCAGCACGACCGACTGCAGCGGCGAAGAAGCGGAATACGCTTGCGGCGTTTGTCACAAAGTACTGAGCTCCGCGAGCTCCCTCGACCGCCACGTTCTCGTCCACTCGGGCGAGCGACCCTTCAAGTGCAAGTATTGCGACATGGCCTTCACGACCAACGGGAACATGAACCGACATTTGAGGACCGCTCACCGGGCGATCTCGCCCTCCCACAGCTGCACCGATTCCGAAGGCAGCAGCGACTCGGAGCGACCCCTCAAACGCCGACTGATACAAGAGGAGTACAACAACAACGAGATAGCTAAGCGCAACTCGCCCGAGCTTATCGAGGAGAAGCGTGCCCGATCCCCGGCGAAACGCAAGTGCCCGGACTACGAGGACTACGAGGACGAGGGTCAAAGGAAACACAAGATTCTCCTGGGTAACGCGAGGACCGAGATCAAGAGTGGCTACGGGGACGCACCGCCCACCGCGTACAATTGCAACGTGTGCGGCCGCCAAGATTTCGCGACGAGTGCCTTGCTCGAATCCCATTTGGAGCGAAGCCACCCGGAAATACCCGCGAAATGCGACTCCTGCAATCTCAGTTTCAAAAACCACCGAGCTTTGAATCTCCATCGTTTCATGATCCACTTCACCGAGCACGGGAGCGCGGCCGCCCCGCGGAGTCTCCGTAACTCAGTAGTCGGTTTCAACGATCTCACCTTCGTCGACTTCTCCTCGGACAAGTTCCCGGCGATCGCTCGTGCCGTTTGCGAGCAGTCGGTCCACCGACCAGCCTCCGGCGAGACACCCAAGTACCAGTGCTCCAAGTGCCTGAGGGCCTTCCCGTGTCGTTCGGCGTTGGACGCCCACGAGACCGATTGCGGCTTGTTGCCACCGACGGATCACAGGAGCACCGACGACCAATCGATGAGGGACGACTTCTTCGCGGGTCTCGACTTGCAGAACAAGGCCGCGTTGGCCGAAGCCAAGGAGGGCAAAGATCTCGCTGACATCCAAAGCATCATATCCGTAACGTCGGGTCCTATCCTTCAAAATTTCAATCGGGCGGACGCCACCACACCCGACAACTGCAAAATCAAACAGAGCTTCGGCTCCTCCGGGTCTTCAGGCACGCCCTCCTCCGAGTACCACGAGGAAGAAGCTCAGGACGCTTTTGCCGCGGAATTTCGGAAAATGAAGCTCAAAGGCGAATTCCCGTGCCGACTGTGTACCGCGGTATTCCCGAATCTACGAGCTCTCAAGGGCCACAATCGAGCGCACATGGGTGTGGGTCCCGGTATGCCGTATCCGTGCAACATGTGCCCGTACAGCAGCACCGACAAGGCTACCCTCGTCAGACACTTGAGGTCCCACAACGGCGACAGACCGTACGAGTGCTCCCTCTGCAACTACGCGTTCACGACCAAGGCGAATTGCGAGAGGCACGTGAGAAATCGCCACGGCAAGCTTTCGAGAGAGGAGATCAAGAGTGTCCTGATTTACCATCCGAGCGAGGATTCGACGAACGACACCAGTTTGGAGAGGAGTTCGCCTCGCGGTCTCATCAGAGACGAAGTTCGCAAAACCCTCGTTTATCCGAATGAACGGGACGAGGTGCAATATCCCAACGAGGTGAGAGTCAAGGACGAGGGTAAACTTCGTCAGTCCTCGCTACCGGGACTCCACGGGATCGGAGTTAATCATTACGAGAAAAGTGACATGTTCCCTAGGCCGGTGTCGATGCCTTTGGAGCTCACGTATCGAAACGACGAGCTCGACAAAACCCAACCGATCAACGTCAAGCACGAAGCTGACGATCTCGAATCTAGATCTTCGGACGGCAGCATGTCTCTAGTCAGCGAAACCAAAGCGGACGCACACCAAAGAATCCAAGCTAGTCCGATGGATCTCAAGAAATCGAGTCCCAATGAAAATGCAAACGAAGGTGCTACCGGTCACGAGGAGGCTCCCCTCGACTTGTCGATGGACGTTCTCGATCTCAGTAAAAAGGCAACGACCGGACTGGCCACGACTACCGCGACTCCTCACGCCAAGAAAGAAGGTAGCGACATCAATGGCAATGCCGAAGATTTGACCAGTAATCACAAAGATTTTTACAACACGACCAATCAACTGCTCCTCACGCAAGCTCTACTCAAAGCTGGCCAAGTCGGTGCTCAACCGTCTTCGCTCGAGTCGTTCTACGCGAACGCCCACATGCTTTATCGGAATTTCGGCACGTTCCCCGGCGTCGGAGCAGGTATACTACAACCGTACCTCTTCAATCCACACTTGTTCACTCAGGATTTCGCGATGAAGGAACGATTGCAAAAGGAGCTCGTTCGCGGTCTCCAGACGAGCGGTGGCAGCCTCGTCGAGCCACCGACACCTGGTTTCGGGGCAGCTTTCCCTCAATCCCGCAATCCCGTGACGAATCACGTCAACACCGAGCAAAACGATTACGCCAATCTTATGTCTTCGAAACTGATGACCAAGAACATCCCATCCCGCGAAAAACTCGAGAGTTCTCCATCCTCGAATTCCGTGAAGATGGTGATTAAGAACGGCGTGTTGATGCCCAAGCAAAAGCAACGACGTTACAGAACCGAGAGGCCATTCACCTGCGAGCATTGCTCTGCGAGGTTTACTCTACGAAGCAACATGGAACGACACATTAAACAACAGCACCCCCAACATTGGAGTCAAAGGCCAAGAGGTGGACATTCGACCAGAGGGAGACCACCAGCGAATCCTCCAACGCTCTTGCAAAATTTAGGACAAACTTCGTCGCAGTCGTATCCGAATTTGTTACCCAAACTGAGCCAGTCGATTAACTCGGATTACGGAAAGCATTCGATTTCCGATCAAGTGAAGTATGCCATTCTAGCTCAACAGTTGAAAGGTAACAAACCCGAAGAAAATGACACCGACGAGGAACTTATCATTGACGAAGAATCGGCAGCCAATTTGGAAAAAGAAGCTAGAGAAGCTAAAGAAGCTAAAGAAGCTGGGAAAGAACCAACCGAGAGAACGCTGAGTCTTCTTCGAGGTAAACTGGAGGCTAATATTGAATCTAAAGAAAATAAAGAATCTGAAACGAAAGTATCAAACGAATCGAAGTACAAAGTCAAAGAGGAAGTTGAGAATATCGCTGACAGTAGTACCAACGAAAACGAGGCTACGAGTAAAGACGAAGAATCCGTGCAGGTACTCGATTCATCGAGCAAACCGTACGAGATGGTCGTAAAGCCTGAAATACCTGCGTACATCAAGCAAGAACAGAATGAAAATGAAGATCTGGCGAGTGTTTCCGAAATTTTAGACAACGCCTCCCAACAATACAAATTTCAATCTCAATACATGAGCGACGAGGAAGGCTTGGTGGCATCGACGAGCGACTGCAATCAATCGGGTAGCGACGAGAAGTCAGATTCCGTGAATTCGGGAAATTCGGGAAATTCCTCGACGTCGAAAAAGAAGAAAAAAATGAAGAAGAAGAAGAAGAAGAAGTCCGCGTACTCGATGGCACCGAATCGAGTGATATGCCCGTATTGTGAACGTCCGTTCCCTTGGACTTCTTCGTTAAGGCGACACATCTTAACGCACACCGGACAAAAACCGTACCAGTGCATGCACTGTTCTCTACTGTTTACTACCAAGTCCAACTGTGATCGTCACTTATTGAGGAAGCACAAGGCGAACGCCATCAAGATAAGACGAGCACGCAGTACATCGTCACCCGAATTTCAAGAAACTCCCGCGAACAACAACAGCCAGTTTTCTATGAGAAACGTCCCGGAAAGGCCGTACAAATGCAATCAATGTCCTAGCTCAACGTTCTCGACACTGGGAAACTTGAAAAAGCACAGATCGACGAAGCATCCGTTGAATATAAAATCAAGGCCTGAATCACCATCCAGCGAGACTCAAAACAGTCCTCAAGAGAGTTCTCAAGAAAATGTCCAAGAAAGTCCTCAGGAGGTACCTCCAGAAACTCCTATCGAAGGCACTCAAGAGTATTCTCAAGACTGTCCGAAGCAAAATGATCAAAGCGGATACGAAAGCCAATCGTCGGGTATCTCGGAGAATTTGGATAACAAATGTTCAACGCCAATAAATCCTGTGAAAACTTCGAGCAGCGTGAACACATCGTCATCGGCAAACGAAACCTCGAGGTCGAGAAAAACATCACCGAGGTCATCACCAGGACCAACAACCGAAGCACCTTTCAAATGCCATCTATGCGACAGCGGATTCTCCGAGAGGCAGGACTGCCTCGAACACATCAAGGACAATCACGAGAGATCCTACGAGATGCTCATGGCCAAGGGAGCTTTAGACATGGACATCGATGGGCAAGATGAACAGATGCCACCTGCGCCGCCTCCGCCAGTTCAACCGCAACCCCAAAATCCCAGCGACGGCGAAGAAAGACGTGGAAGATTCCCAGACTACAGTAATAGAAAGGTTGTCTGCGCTTTCTGTATGCGTCGTTTCTGGTCAGCCGAAGATCTCCGACGACACATGCGTACGCACACCGGAGAGCGTCCATTCTCTTGTGACATTTGTTGCCGTCGATTCACACTGAAACACAGCATGCTCCGACACCGCAAGAAACACGAATCGGTGGACTCGACCATGTACGTCGGTACAAGCGGAGACGAGGATAACGCATCGGTTACGGCATCGATAAACGTTCCAATGAGTCAGCCACCTACCATCACTCCAAGATCTCAACATACACCGCTCTCGAGTTCGGCGACATTAGTCTCATTGCCACAAGTCGCGAGTGTAGCTACTGGCGATGCAGCTCCTCTGATGCACCGTTTCAACCCGTACGAAAAATTGACGACACTCACGGGGAAACTTGCTGCAGGTTTATCACCTACGGTCGATGCGAACGACAACACCGATAACGACCTCATCTCAAATCTTCTTGGGATCCGAGACAAGAGCATCATTGATCGCGTGCTCCAAGCCTCTGCCGACGACGCGGCTAAGCTTCTTGGAGTCAAGGGGAATAACGAATGA
Protein Sequence: MCPLGLCARFPGNSLDRSSLSGRGESAVNHHRVTAETGPDQRDGCTESQTDVASSQLVDQPEGTHPCPACPLVLTSSRDLTNHLRGHNSPRSTTDCSGEEAEYACGVCHKVLSSASSLDRHVLVHSGERPFKCKYCDMAFTTNGNMNRHLRTAHRAISPSHSCTDSEGSSDSERPLKRRLIQEEYNNNEIAKRNSPELIEEKRARSPAKRKCPDYEDYEDEGQRKHKILLGNARTEIKSGYGDAPPTAYNCNVCGRQDFATSALLESHLERSHPEIPAKCDSCNLSFKNHRALNLHRFMIHFTEHGSAAAPRSLRNSVVGFNDLTFVDFSSDKFPAIARAVCEQSVHRPASGETPKYQCSKCLRAFPCRSALDAHETDCGLLPPTDHRSTDDQSMRDDFFAGLDLQNKAALAEAKEGKDLADIQSIISVTSGPILQNFNRADATTPDNCKIKQSFGSSGSSGTPSSEYHEEEAQDAFAAEFRKMKLKGEFPCRLCTAVFPNLRALKGHNRAHMGVGPGMPYPCNMCPYSSTDKATLVRHLRSHNGDRPYECSLCNYAFTTKANCERHVRNRHGKLSREEIKSVLIYHPSEDSTNDTSLERSSPRGLIRDEVRKTLVYPNERDEVQYPNEVRVKDEGKLRQSSLPGLHGIGVNHYEKSDMFPRPVSMPLELTYRNDELDKTQPINVKHEADDLESRSSDGSMSLVSETKADAHQRIQASPMDLKKSSPNENANEGATGHEEAPLDLSMDVLDLSKKATTGLATTTATPHAKKEGSDINGNAEDLTSNHKDFYNTTNQLLLTQALLKAGQVGAQPSSLESFYANAHMLYRNFGTFPGVGAGILQPYLFNPHLFTQDFAMKERLQKELVRGLQTSGGSLVEPPTPGFGAAFPQSRNPVTNHVNTEQNDYANLMSSKLMTKNIPSREKLESSPSSNSVKMVIKNGVLMPKQKQRRYRTERPFTCEHCSARFTLRSNMERHIKQQHPQHWSQRPRGGHSTRGRPPANPPTLLQNLGQTSSQSYPNLLPKLSQSINSDYGKHSISDQVKYAILAQQLKGNKPEENDTDEELIIDEESAANLEKEAREAKEAKEAGKEPTERTLSLLRGKLEANIESKENKESETKVSNESKYKVKEEVENIADSSTNENEATSKDEESVQVLDSSSKPYEMVVKPEIPAYIKQEQNENEDLASVSEILDNASQQYKFQSQYMSDEEGLVASTSDCNQSGSDEKSDSVNSGNSGNSSTSKKKKKMKKKKKKKSAYSMAPNRVICPYCERPFPWTSSLRRHILTHTGQKPYQCMHCSLLFTTKSNCDRHLLRKHKANAIKIRRARSTSSPEFQETPANNNSQFSMRNVPERPYKCNQCPSSTFSTLGNLKKHRSTKHPLNIKSRPESPSSETQNSPQESSQENVQESPQEVPPETPIEGTQEYSQDCPKQNDQSGYESQSSGISENLDNKCSTPINPVKTSSSVNTSSSANETSRSRKTSPRSSPGPTTEAPFKCHLCDSGFSERQDCLEHIKDNHERSYEMLMAKGALDMDIDGQDEQMPPAPPPPVQPQPQNPSDGEERRGRFPDYSNRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDICCRRFTLKHSMLRHRKKHESVDSTMYVGTSGDEDNASVTASINVPMSQPPTITPRSQHTPLSSSATLVSLPQVASVATGDAAPLMHRFNPYEKLTTLTGKLAAGLSPTVDANDNTDNDLISNLLGIRDKSIIDRVLQASADDAAKLLGVKGNNE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01524201;
90% Identity: -
80% Identity: -