Ever006842.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eupristina verticillata
Gene Symbol
Rreb1
Assembly
None
Location
GWHALOE00000118:2909874-2917462[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.0015 0.11 12.5 0.1 1 23 54 76 54 76 0.96
2 16 0.00024 0.017 15.0 0.1 1 23 92 114 92 114 0.97
3 16 8.2e-07 5.9e-05 22.7 1.4 1 23 120 143 120 143 0.98
4 16 0.012 0.85 9.7 0.1 1 23 240 264 240 264 0.95
5 16 0.018 1.3 9.1 2.7 2 23 270 292 270 292 0.95
6 16 0.99 71 3.6 0.5 1 19 348 366 348 368 0.90
7 16 0.049 3.6 7.7 0.1 1 23 483 505 483 505 0.96
8 16 1.9e-05 0.0013 18.5 0.3 1 23 514 536 514 536 0.98
9 16 0.00091 0.066 13.2 2.8 1 23 542 565 542 565 0.97
10 16 0.00034 0.024 14.5 3.0 1 23 959 982 959 982 0.97
11 16 0.00048 0.035 14.0 0.1 3 23 1271 1291 1269 1291 0.97
12 16 0.67 49 4.1 6.5 1 23 1297 1320 1297 1320 0.97
13 16 0.003 0.22 11.5 2.2 1 23 1359 1383 1359 1383 0.97
14 16 4 2.9e+02 1.7 2.5 1 23 1511 1534 1511 1534 0.86
15 16 0.0082 0.6 10.1 0.4 2 23 1587 1608 1586 1608 0.94
16 16 0.98 71 3.6 8.2 1 23 1614 1636 1614 1636 0.98

Sequence Information

Coding Sequence
ATGACTTTTTCCGCGCGCGATCCACTCGGATACGCGTCAGAATGCCCTGGGACTCCTGGGCATTTGACTGCTGAGACTGGACCCGATCAGCGCGACGGCTGCAACGAGAGTCAAACGGATGTTGCATCATCACCACTGGTCGATCAACCGGAAGGTACTCACCCGTGCCCGGCCTGCCCACTGGTGCTCTCAACCTCCCGCGATTTGACGAATCATCTACGAGGTCACAACTCACCCCGTAGTACTAGCGATTGTAGTGCAGAGGAGGTAGACTACGCTTGCGGCGTTTGTCACAAAGTCCTCAGCTCCGCAAGTTCTCTGGATCGCCACGTCCTCGTCCACTCGGGAGAGAGACCATTCAAGTGCAAATTTTGCGACATGGCCTTCACTACCAACGGCAACATGAATAGGCACCTGCGCACGGCCCACAGGACCGTCTCTCCCTCCCACAGTTGCACCGACTCCGAGGGAAGCTGCGACTCCGAGAGACCTCTGAAACGTCGTTTGATCCAGGAGGAGTACAATAATAATGAAGTTGCCAAGAGGAACTCTCCAGAGTTCGAGCACAGCAAGCGCTCGAGGTCACCCGAGCTCATCGGGAAGCGCAAATGCCCGGACTATGCCGACGACGTGGACAGCCACCGCAGGCACAAGATTCTCTTGGGGAATGCGCGAACGGAGATTCGCAGCGGCTACGCAGAACCTGTCCAGAGCACTTACAATTGTTCGATCTGTGGGAGACAAGACTTCGCGACGAGCGCCCTCCTCGAAGCCCATCTTGAGAGAAGTCACCCGGAGATCCCCGCCAAGTGCGACAGCTGCAACCTCTCCTTCAAGAACCACCGAGCCTTGAACCTCCACCGATTCATGATACACTTTAGCGAGCACGGAGCTGCCGCAGTTACGCGAAACCTGCGCAACTCCGTCGTCGGCTTCAACGACCTTACCTTCGTCGACTTCTCATCCGACAAGTTCCCCGCGATCGCCCGGGCCGTCTGCGAGCAGTCACTCCACCGACCAGCTTCCGGGGAAACCCCCAAGTACCAGTGCTCGAAATGCTTGCGAGCCTTTCCGTGTCGATCGGCTTTGGACGCCCACGAGACGGATTGCGGACTGTTACCCATGGACGCCGGGGAGCACAGGATGCACGACGAGCAGTCGACGAGAGACGACTTCTTCGCAGGACTCGATCTCCAGAACAAGGCGGCTCTCGCCGAGGCCAAGGAGGGCAAAGATCTAGCCGACATTCAGAGCATCATCTCCGTTACCTCCGGCCCCATACTCCACAACTTCTCGAGATCCGACACCAGCACTCCGGACAATTGCAAAATCAAGCAGAGCCTCGGCTCTTCGGGCTCCTCCAGCACACCTTCTTCCGAATACCACGAAGAGGAGGCCCAGGATGCATTTGCCGCCGAGTTCAGAAAAATGAAGCTCAAGGGCGAGTTCCCATGCAGGCTCTGCACTGCGGTATTTCCCAATCTTCGAGCTCTCAAGGGTCATAATCGGGCGCACATGGGTGTGGGTCCAGGCATGCCCTACCCTTGCAATATGTGTCCTTACAGCAGCACGGACAAGGCCACCCTGGTCAGGCATTTAAGATCCCATAATGGCGACAGGCCCTACGAGTGCTCTCTATGCAATTACGCGTTCACCACCAAAGCCAATTGCGAAAGGCACGTGAGAAATCGCCATGGAAAATTATCCAGAGAAGAAATTAAGAGTGTGCTCATCTATCATCCCAGCGAAGACTCGATAAATGACAGTAGCTTGGAGAGAAGTTCGCCCAGGGGATTGGTCAGGGATGACGTTCGTAAGACGCTCATCTACTCGAATGAACGGGATGAGCTAACTCCACAACAGTTGCATTACCCTGTTGATATCAGAATCAAAGACGAGGCGAAACTACGTCAACCGGGAATGGCAGGTTTAGCAGGTCTTCACGGAGTCGAACTTGGTCATTACGATAAAAATGACGTATTTTCCCGACCCCCGACGATGCCTCTAGAACTAACCTACAGGACCGACGAGTTGGACAAAACTCAGCAGATTAATATGAAACCAGTGGACGATGACATGGATTCAAGGTCCTCGGATGGTAGCGTGTCTCTAGTCAATGAAACCAAAGCGGACTCACACCAAAGAATTCAGGCGAGTCCGATGGACCTGAAAAAATCAGATATGAATGAGTCTTCAATCGTCGAGGGCAGTGGTACTGAAGACGCACCTCTTGATTTATCCATGGACGTACTTGATCTGAGCAAGAAGGCTTCGGCAGCTGCAGCGATGGCTGCTGCCGCAGCAATGAAGCATAGTGCAGGTGGAGACATTAATGGAAATGCCGAAGATCTTGGCGGAAACCACAAGGATTTATACAATACAACAAATCAATTACTACTCACACAGGCTCTCCTTAAGGCCGGCCAAGTCGGAACTCAGCCTTCCTCTTTGGAAACTTTCTACGCAAACGCTCACATGATTTACCGCAATTTTGGCACTTTCCCTGGTGTCGGTGCTGGTATTCTTCAACCATATCTGTTTAATCCACATCTTTTTAGTCAGGATTTCGGAATGAAAGATCGTCTGCAGAAAGAATTGGTTCGAGGTCTCCAAACGAGCGGAGGAACTCTTCTCGAACCTCCGGCTCCGGGTTTTCCAACGAATTTTACTCCCGCACGAAATCCTTCATCCAGTCATAATATCAACGAACAAACTGAATACGTAAACATCATGTCCTCAAAGGCAATGAATAAAAGTATTTCCCCCCGTGACAAAATGGAAGCCTCGCCATCGGCTAATTCTGTAAAAATGGTTATAAAAAATGGCGTACTGATGCCAAAACAAAAACAGCGACGATACAGAACCGAGCGTCCATTTACCTGCGAACACTGTTCCGCGAGATTTACCTTGAGGAGTAACATGGAGCGCCACATAAAGCAGCAACACCCACAGCATTGGAGTCAGCGACCCAGAGGAGGACATTCCACCAGGGGAAGACCGCCGACAAATCCACCCACGTTACTGCAGAATTTAGGACAGGCTTCCTCTCATCAGCAGATTTCTCATTCTTATTCAAATTTACTGCCAAAGCTCGGACAGTCAATGACGTCCGATTATAGTAAGCATGCGATCTCTGATCAAGTCAAGTACGCAATTTTAGCTCAGCAATTGAAAGGCAATAAGCACGAGGATAACGATACAGACGAGGAGCTAATTATTGACGAGGAGTCAGCTATTTTGGAAAAAGAGGGCAAGGAAGGTAATGCTAAAGAACCATCGGAAAGAACGCTCAGCCTTTTAAGAGGCAAACTCGAGGCCAACATTGAATGTAAAGGAGGTGATGAAGATGGAATAAAAAACTGTAATGAACAAAAAATACATATTAAAGAGGAAATTGATAGTCAAGATAATTTAAAAAGTTATGAAAATAAAATGTCAAAAAAATCTGATAATTCTAAAGAGTTAGATAGTGAAGAAATGTCCAATGATCTTCCCCAAATAACCATAAAATCAGAATTAAAAATTGATGTTAAAGAAGAACATAACGAAAACGAAGATTTAGCAAGTGTTTCCGAAATATTGGACAATGCATCTCAACACTATCAACAGTTTCAGTCTCAATATATGAGTGATGAGGAAGGGTTAGTCGCTTCAACGAGCGATTGCAATCAATCGGGTAGCGATGAGAAGTCCGATTCCGTGAATTCTGGCAACTCTGGCAATTCTTCGACTTCCAAAAAAAAGAAAAAAATGAAGAAAAAGAAGAAAAAAAAGAAGTCCGCGTATTCCATGGCACCAAATCGAGTAATTTGCCCTTATTGTGAGCGACCCTTCCCTTGGACCTCTTCGCTCAGACGACACATCCTGACGCACACTGGACAAAAGCCATACCAGTGCATGCATTGCTCCTTACTTTTCACTACTAAATCAAACTGCGATCGTCACTTGTTGAGGAAGCATAAGGCCAACGCCAATAAAATACGACGAGCGCGTAGCACATCATCACCCGAAGCTCAGGAACTGCCAAATAACAACAACAGCCAGTTCTCTATGAGGAACGTGCCAGAACGGCCCTACAAGTGCAATCAGTGCCCAAGCTCAACATTTTCCACACTGGGCAATTTAAAAAAACACAGATCGACGAAGCACGCACGCAACGCTAAATCGAGGCCCGAATCACCCTCCAGTGAACATAACAGTCCTCAAGAAAGTCCAAACGAGTGCATGCAAGAGTGCCAGCAGGACTGCCAGCAGGACTGCCCGCAGGACTGCCCGCAGGACTGCTCACAGGAGTGTCCTCAAGAAATTCCTCAAGATTGTACACAGGACTGTCCCAAACAAAATGATCAAAGTGGATACGAGAGCCAATCCTCGGGAGTTTCCGAAAACCTGGACAACGGCAGCTCGACAACCATAAATGCAGTAAAGCCACCGATAAATTCCAATAATAGCTCATTGATAACAACTGAAAGTTCGAGGTCGAGGAGAACGTCGCCCAGGTCCTCACCTGGACCCATCACCGAAGCACCTTTCAAGTGTCATCTGTGCGACAGTGGTTTCGCCGAGAGACAAGACTGCCTTGAACACATTAAGGATAACCATGAACGATCTTACGAGATGCTCGTAGCCAAGGGTGCGCTTGATATGGATATTGATGGACACGAGGAACAATTACTACCCATACCACCCCCACCCCAGCATCCAAGCGACGGCGAGGAGAGACGTGGAAGGTTCCCCGATTACAGCAATAGAAAGGTAGTCTGCGCCTTCTGCATGCGTCGCTTCTGGTCAGCTGAGGATCTGCGTCGCCACATGCGCACGCACACCGGTGAACGACCCTTCTCCTGTGACATCTGCTGCCGTCGTTTCACCCTCAAGCACAGTATGCTGCGACACCGCAAGAAACACGAATCCGTAGACTCGACGATGTACGTTGGTACAAGCGGCGACGAGGACAACGGCTCGATCGGGTCTATGACTCAGCCACCTACGATAACGCCTAGGTCGCAACATCAGTCGGCCAGCGCTCCGGGTACCACGTGCTTACCCCAGGTCGGAAGCGTGGCCACCGGTGACGCCGCCCCCAGCGGTCTCATGCGATTTAATCCTTACGAGAAACTCACTACCCTCACCGGCAAGCTCACAGCGGGGGTCTCACCGACCCTAGCGGTTGATGCCAACGACAACACCGACAATGACCTCATCTCCAATTTGCTAGGAATCAGGGATAAAAGCATCATCGACCGAGTTCTCCAAGCATCGGCCGATGACGCGGCCAAGCTCCTTGGTTTGGCGATACGTAGACAATTAAAAGTAAACGGTAGAGGCCTGCGAGCACAAGAAGTGGTGCGGCGAAGCTTCAATGGCTTTTATAGGGTGCGAAAAAATCTTTTTTTTTACATATATATATATTTTACCAGAATATTGCACACGTGA
Protein Sequence
MTFSARDPLGYASECPGTPGHLTAETGPDQRDGCNESQTDVASSPLVDQPEGTHPCPACPLVLSTSRDLTNHLRGHNSPRSTSDCSAEEVDYACGVCHKVLSSASSLDRHVLVHSGERPFKCKFCDMAFTTNGNMNRHLRTAHRTVSPSHSCTDSEGSCDSERPLKRRLIQEEYNNNEVAKRNSPEFEHSKRSRSPELIGKRKCPDYADDVDSHRRHKILLGNARTEIRSGYAEPVQSTYNCSICGRQDFATSALLEAHLERSHPEIPAKCDSCNLSFKNHRALNLHRFMIHFSEHGAAAVTRNLRNSVVGFNDLTFVDFSSDKFPAIARAVCEQSLHRPASGETPKYQCSKCLRAFPCRSALDAHETDCGLLPMDAGEHRMHDEQSTRDDFFAGLDLQNKAALAEAKEGKDLADIQSIISVTSGPILHNFSRSDTSTPDNCKIKQSLGSSGSSSTPSSEYHEEEAQDAFAAEFRKMKLKGEFPCRLCTAVFPNLRALKGHNRAHMGVGPGMPYPCNMCPYSSTDKATLVRHLRSHNGDRPYECSLCNYAFTTKANCERHVRNRHGKLSREEIKSVLIYHPSEDSINDSSLERSSPRGLVRDDVRKTLIYSNERDELTPQQLHYPVDIRIKDEAKLRQPGMAGLAGLHGVELGHYDKNDVFSRPPTMPLELTYRTDELDKTQQINMKPVDDDMDSRSSDGSVSLVNETKADSHQRIQASPMDLKKSDMNESSIVEGSGTEDAPLDLSMDVLDLSKKASAAAAMAAAAAMKHSAGGDINGNAEDLGGNHKDLYNTTNQLLLTQALLKAGQVGTQPSSLETFYANAHMIYRNFGTFPGVGAGILQPYLFNPHLFSQDFGMKDRLQKELVRGLQTSGGTLLEPPAPGFPTNFTPARNPSSSHNINEQTEYVNIMSSKAMNKSISPRDKMEASPSANSVKMVIKNGVLMPKQKQRRYRTERPFTCEHCSARFTLRSNMERHIKQQHPQHWSQRPRGGHSTRGRPPTNPPTLLQNLGQASSHQQISHSYSNLLPKLGQSMTSDYSKHAISDQVKYAILAQQLKGNKHEDNDTDEELIIDEESAILEKEGKEGNAKEPSERTLSLLRGKLEANIECKGGDEDGIKNCNEQKIHIKEEIDSQDNLKSYENKMSKKSDNSKELDSEEMSNDLPQITIKSELKIDVKEEHNENEDLASVSEILDNASQHYQQFQSQYMSDEEGLVASTSDCNQSGSDEKSDSVNSGNSGNSSTSKKKKKMKKKKKKKKSAYSMAPNRVICPYCERPFPWTSSLRRHILTHTGQKPYQCMHCSLLFTTKSNCDRHLLRKHKANANKIRRARSTSSPEAQELPNNNNSQFSMRNVPERPYKCNQCPSSTFSTLGNLKKHRSTKHARNAKSRPESPSSEHNSPQESPNECMQECQQDCQQDCPQDCPQDCSQECPQEIPQDCTQDCPKQNDQSGYESQSSGVSENLDNGSSTTINAVKPPINSNNSSLITTESSRSRRTSPRSSPGPITEAPFKCHLCDSGFAERQDCLEHIKDNHERSYEMLVAKGALDMDIDGHEEQLLPIPPPPQHPSDGEERRGRFPDYSNRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDICCRRFTLKHSMLRHRKKHESVDSTMYVGTSGDEDNGSIGSMTQPPTITPRSQHQSASAPGTTCLPQVGSVATGDAAPSGLMRFNPYEKLTTLTGKLTAGVSPTLAVDANDNTDNDLISNLLGIRDKSIIDRVLQASADDAAKLLGLAIRRQLKVNGRGLRAQEVVRRSFNGFYRVRKNLFFYIYIYFTRILHT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01524201;
90% Identity
-
80% Identity
-