Waur002895.1
Basic Information
- Insect
- Wasmannia auropunctata
- Gene Symbol
- -
- Assembly
- GCA_000956235.1
- Location
- NW:3688478-3698662[+]
Transcription Factor Domain
- TF Family
- MBD
- Domain
- MBD domain
- PFAM
- PF01429
- TF Group
- Unclassified Structure
- Description
- The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2e-13 5.9e-10 38.1 0.2 10 70 278 336 273 340 0.86
Sequence Information
- Coding Sequence
- ATGGACGGCGCGAACGTGAATGGCGGGAACGCCGCGGTACCGCGCGAGGTTCCTAACCTCGaaagtggcggcggcggcgacggtggaGTCGGCAGTGCGGCGGTCGTGCCGATGGCAGAGATGACGCAGGACTCGGGCGACAAGGCTGGCGGTAACGGAGACGCGCAGGAGATCAACGGCGAGCTGAGGGGATCGCCCAGGAAACACAGCGCCCCGCATCCCCGCAGGAGGATGAGAAAATTCAAGGCCAACTCCACGGGCGCTATGGAGGTCGACGCGGTGGAGACGGCGCCCGGGACGAGGGGGCGCAAGCGCAAGCTCTCGGAGTTCGAGGACGCCAGCTCCGAGGAGTTCGAGGAGTTCAACGGCTTTGCCGCCCAAGGGCTCGAATTGCAACCGGGCAGTAACGTTCTGAAGAAACTTATTGCAGAAGCAGAAATAGCAGAGGCACAACTTACAAAACGTGTAAGATATTCAACGAGGACTTCAGATGCTAGAGAAAAGTTGGATGATAAAGATTTTGATGATTTGAACATGAGAACCTACGTTTACGAAACAGACAGTTTCGAGCATTTGGATATAACAAAgatgaaaaaggaaaaggaatCCGACAAATCCGAAACGGATTCGATTGATATACCAAATAGCATAGATTCCGAGGTGGAGCCAAACAAAGTTGATATAACTTCCATTAAATCCACAAATTCGTCGGCTGCAAGTAGTCCCTCTGCCACATCGCAAAGGTCTAAGGGTAGCCTTATTTCTGGCGGTGCCAGTCCGGGAGGGAAGCAGAAAACTCCTGTTGACATGTCGAATCCTTTATACAAAGAACCATTTAAATATGGATGGAAGCGAGAATTAGTGTTTAGAGCTAGTCATGACTCTTCCTTCAAAAAAATGGCTGATATATATTACTACACACCAAAGGGGAAAAAAGTGCGGAGTTTTAGAGAGGTTGCGGAATCTCttaaTTCGAAGGAATTGACCATTGACAATTTCACATTCTGCAAAGAACCTCTTGGGCTTAATGATCCTGAAAAGGAGGTTATTCGAGATGCTAAAAGATTACGAGGATCTGTGGGATCTGCAAAGAAGTATAACAGAAAAGCTACACCAATAAAAAAGACAGTACAGGAACCAGTGGCAAAGAAATCGGTACAAGAACCTGCGACAAAGAAACACGAACCTGGCACGTCGAAAAAACAGCCGGCACAAGAACCACCTGCTCCTGCACCTACACTTCCTGAAGTTTCAAAACTTGCTCCCGCACCTGTGTCGGTACCTACAAAAGCAGCTAAATCGACAAAAGCCTCTCCAGCATACAAAACAAAAACGATAAAGAAAACTCCTCAGATAAAAATAAAAACACCAGGTGAGGAAAGTGAGATGCTTCCACCTACACGGAGTACAGCAAATACGAGGAGAAACCAACAAGCAGCTGAGAAGGTTATACCAGTCAAAACCAAAAGATTGTTAACGCCCAAAGTTCAAGAGCCATGCAGCATAAGATGTTCGACGAGTATGGGATTAATACCAAGTTTGCAATGTCGAGTTTGTCTCTGTTTATATCATCCTGAATGCGTCGATGGGATGGAATTTGCAGGCAATGATGAGTATGTCTGCAAGaaTTGTCAGCCGGATACTAAAGAATCTCATATGCCAAACAATCCGTCTTTAACACCACCTCCATTGATTCCAATCAGTATGTTAGGTGCACAAAATGCAAAATCAAAACATCAGACTAATTCGTCTCCTCCAAAATTGCAAAGAATTCCAAAGTCCGAGAGTGCGGAAGCGCAAACGAGAAATTCTTCCAAAATACCGTCTTCATCAAATTCACCCTCAACGGTGGACAAAAAGGAAAGTACTTGGTTCCCTCAGACGGAGAATGAATTCTTGCAAAGTCACGATGGTACCATACCGAAACCGGCTCAAAATATCGCTGTAATGGGCGGCAAAAGATACATTGTAGTACCAAAAAATAACGCAATGGCAGTTCAACCTGCTATAACGGTAAAACCAGACAAAATTGGCGATAAGCCGCCAATGCTTCAGGACGGTCCGCTTACCGATATTACCGATAACACTGCAGATAATTCTGCGACGAACTCGTGCACACCTACATCCTTAAATACTGATTCGTCTGAAAAAGTAGACATTACATCTGATAAAGAAATTTCGAAGGATGCAATTTATCAGACAGATCTTGTATCTTCTGTTACCACTGAAATAACTGACGCATTTATACATGACAATAAAGATAAGGATAGTAAAAGTACTCCTAAGAGAGACGATTCCGTTGAGAATATATTAGAGAACGAATCCTTTACTGCCAATATAGATTCTGACTCAGAGAGAAAAACCGGAGATACAAGTTGTAGATCACCTGAGAGCAAATCTACGTATTCACCAGTACATACGGCAAGTATCACAAATGCTCTTGAAGCAAGTGTAGAAGCTGAAACGGAAATTAAAACGGATCGACAACAGTCGTTACCAAGTAAAGTGGatacagtaataaaaataaaaagtagcaAgCGGAAGCAAAACCAACAGGAATTGGAGCAACAGCAAAATTTCATGAATTCAGTTTGCGCCGGTTATCATGCCCTACTGCGTATTTTCCAATACCTTAAAGTGCAAGAGTTATTGCGAGCCGCGCGAGTTTGTAAAATGTGGCGTGACCTCGCAGCACATCCGTCACTATGGAAGACCGTGCGAATGAAGAACAGTCAAGTAACTGACTGGGACGGTTTGGCGGATACGTTACAGAGACGTGGCACGCAGCATCTAGATCTCAGGAAAATGCTGGTTGCTGGCGAGTCCGACGGCATCTGGAAGAAATTCTTGACAGTCATACCACGCGTGACCAGTCTCGTGAAGCTCGAGCTATGCAGATGTCCCGTCACGGTTGTAGAAGAAGTTATTAAGACCTGTCCGCAATTGGAGGTGTTCAGTGCAATGTCGATCAAGTGCGAGTTCCTCACGCTGGAGTCGATCGGGAACTTGAGTCGATGTCAAGAACTCAGACTTAAAGCAATATCTGGAATGTCCTTACAACAGGATCTCACACCTTTACAGGATCTGAAGCACTTGACACAATTGAGTTTAACATCGGTTAAAGAActtggaaagaaaaaaatcgacgTTATACAAACGTTGACAAATTTGGAAACGTTAGAATTGGGCGAGTGCTCAGACTTTCCTGACAAGTTTGGAACTACcgttctaattaatttaaataaattggaaCGTCTTAGACTTGAAAAAGGTCAAGGATCTTGTTGTACATTTGATATTCTTGAAGGCGTATCAAAACTGGAGAACTTAAGTCAGATGGAGCTGGTTAATTTTGACGTCAAGAATGGCTTTGATAAATGTCTTGCTAATTGCAAAAACATTAAAAGGTTATTGATCATACCAACTTACATATCCCAGTCGGCGACGTCCAACAACATGGTGCTCGGAGGTGTCACAGAATTGTCAGACAACTTGACGCATTTCATATGGGGCGTTACGCTCGAGTTACTCAGGGTTACGGAACTGTTTGTTGATCAGTGCAATCTCATGAACAAACAGGTTACTGGGGATTCTATACCAGTTTTGAAACCTGTCCCctgcttaaaattaattgcggACGTTGAGGATGAGAACGAGAACCAAAAAGGTGACGATAAGCAACAGCCACATCTAACGAGTCCGCAAGTGGACATTTTACCGTTGCCGCAATTGCAGAAGCTGCTCCTAACCGCGTTGCCCAAGACGCGAGTCAAGATCTTGAAAATTCCCTTTCACGCCACGTGGCGGCAAAGCATTTCCGATACCACCACGCAGTAG
- Protein Sequence
- MDGANVNGGNAAVPREVPNLESGGGGDGGVGSAAVVPMAEMTQDSGDKAGGNGDAQEINGELRGSPRKHSAPHPRRRMRKFKANSTGAMEVDAVETAPGTRGRKRKLSEFEDASSEEFEEFNGFAAQGLELQPGSNVLKKLIAEAEIAEAQLTKRVRYSTRTSDAREKLDDKDFDDLNMRTYVYETDSFEHLDITKMKKEKESDKSETDSIDIPNSIDSEVEPNKVDITSIKSTNSSAASSPSATSQRSKGSLISGGASPGGKQKTPVDMSNPLYKEPFKYGWKRELVFRASHDSSFKKMADIYYYTPKGKKVRSFREVAESLNSKELTIDNFTFCKEPLGLNDPEKEVIRDAKRLRGSVGSAKKYNRKATPIKKTVQEPVAKKSVQEPATKKHEPGTSKKQPAQEPPAPAPTLPEVSKLAPAPVSVPTKAAKSTKASPAYKTKTIKKTPQIKIKTPGEESEMLPPTRSTANTRRNQQAAEKVIPVKTKRLLTPKVQEPCSIRCSTSMGLIPSLQCRVCLCLYHPECVDGMEFAGNDEYVCKNCQPDTKESHMPNNPSLTPPPLIPISMLGAQNAKSKHQTNSSPPKLQRIPKSESAEAQTRNSSKIPSSSNSPSTVDKKESTWFPQTENEFLQSHDGTIPKPAQNIAVMGGKRYIVVPKNNAMAVQPAITVKPDKIGDKPPMLQDGPLTDITDNTADNSATNSCTPTSLNTDSSEKVDITSDKEISKDAIYQTDLVSSVTTEITDAFIHDNKDKDSKSTPKRDDSVENILENESFTANIDSDSERKTGDTSCRSPESKSTYSPVHTASITNALEASVEAETEIKTDRQQSLPSKVDTVIKIKSSKRKQNQQELEQQQNFMNSVCAGYHALLRIFQYLKVQELLRAARVCKMWRDLAAHPSLWKTVRMKNSQVTDWDGLADTLQRRGTQHLDLRKMLVAGESDGIWKKFLTVIPRVTSLVKLELCRCPVTVVEEVIKTCPQLEVFSAMSIKCEFLTLESIGNLSRCQELRLKAISGMSLQQDLTPLQDLKHLTQLSLTSVKELGKKKIDVIQTLTNLETLELGECSDFPDKFGTTVLINLNKLERLRLEKGQGSCCTFDILEGVSKLENLSQMELVNFDVKNGFDKCLANCKNIKRLLIIPTYISQSATSNNMVLGGVTELSDNLTHFIWGVTLELLRVTELFVDQCNLMNKQVTGDSIPVLKPVPCLKLIADVEDENENQKGDDKQQPHLTSPQVDILPLPQLQKLLLTALPKTRVKILKIPFHATWRQSISDTTTQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01405697; iTF_01520228; iTF_00128201; iTF_00127458; iTF_00125927; iTF_00128977; iTF_00129745; iTF_00126715; iTF_01423660; iTF_00765583; iTF_01422930; iTF_01407284; iTF_00885109; iTF_01228373; iTF_01229021; iTF_01421558; iTF_01408218; iTF_01422234; iTF_00181963; iTF_00014719; iTF_00417559; iTF_01409115; iTF_01477565; iTF_00016038; iTF_01261833; iTF_00016682;
- 90% Identity
- -
- 80% Identity
- -