Taur013204.1
Basic Information
- Insect
- Torymus auratus
- Gene Symbol
- lola
- Assembly
- GCA_900474315.1
- Location
- UXGD01009908.1:2846-5394[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 4.6e-07 0.00027 21.3 0.0 1 40 205 244 205 249 0.86 2 5 4e-13 2.4e-10 40.7 0.0 3 39 257 292 255 299 0.88 3 5 0.00012 0.07 13.5 0.0 6 34 312 339 307 345 0.88 4 5 1.7 9.9e+02 0.3 0.0 31 44 353 367 352 368 0.85 5 5 8.4e-12 5e-09 36.4 0.0 5 39 371 405 370 409 0.93
Sequence Information
- Coding Sequence
- ATGGTCGAGAGGTCTAGCAGCAGTGCCGGCATCACGGACACTGATGCAGGTACTCAGTACTGCTTCAAATGGAGCAATTATCAGAGCCACTTGGCAGAGGTGATGCGGGAGCTCCTCGACGAGGAGTCCATGGTCGACGTTACCATCGCGGCCGGCGGCGAACGTATACAGGCACACAAACTGGTACTTTGTGCCTGCAGCAGCCTATTTGCGGATCTATTGTGCCATGCAAATGAGGAACACTCTACCATAATCCTGAGTGATATTGCAGCCCAGGATATAAAATCAATTGTAGAATTTAGCTACAATGGAGAAGTTAGGATACCTGTGGAGAACATAAATAATCTGCTACATGCAGCTCATTTTCTAAAGATATATGGTTTAATGGAAattgaagGTCTTGACGAGACTGAAGTTTCTAATGAAAAAGATATCTCTGCCGAAGAAAATTATCTTGATGAAACTGTAGAGTATGAAGATGATAAACAAGCATATGGAAAAGGTAATATCAATAAGAAGAAtgaggaaaataaaagaaagtactCAGATTCTGATTCAAATCTAAAATATACACATGTAAAACGAAGAAAGAGTGTATGTAAGAGAGATTACACTGATGATATGTTGAACTCTGCTCTTGATGAGATTCGCAACGGAGGCACACTTCTTGAAGCAGCTGCCAAACATCGTATACCTAGGTCTACTCTATACATGCGAGCAAAGGCTCTTGGTGTAACATTGAATCCATGTAGAAATGAATACACGCTTGATGATATGAAGCAAGCTATAGAGGCTGTCTtaagtGGATCTAGTTTACAGCAAGCTGCAGATATGCATGGCATACCAAAAACAGTTTTATGGAGGCGAATCCAAAAAGAAGGTTACAGATCTAATAGGCATGACACAAGAAAAAATTATGCTCCTGACAGAAGAGAAGCTGCTATAAAAGCTTTGCAGAGAGGAGAAGGCCTTACCAAAGTTGCAAatgaatataaaATCCCGAAAACAACGTTATTCAGGGACAAAGCACGTCTTGTCGACCAGGGGAAATTGCCTTCAACATTTTGGAAACGACGTAAAACCGATGGAGAGGAGCATAAACAAGTACGCCTAGAAGAAGCTGTGGCTGCCTGCAAAAACGGTAAAATGTCTCAAGGTACAGCTGCTGCTACTTATCACATACCTAAAACTACTATTTGGAGACGTCttcaaaaagataataaatctgATTCAGATTCGCCATTCAAAAAATCACCAAAGAAGAGGGATTCTATCGACactaaaaatgtagaaatagtGAAAGCTGAAGATTTGAATGAGGGTGACTTTGAGGCATACTGTCCGGAGGATGGAGAAATGAACATAACATACATTGATGAAAGTAATATGTCAGACGATCCAGTAATTATTCTTGCAAGTGGAGATGTGgatgaattaaatttatcaaacaatAGATCTTTGGTAGTAGTACAGCAAGAAGGCAGTGATGATAATTTCATATCATGTGGATTGGAATTAGATGGTACATCCTTTGTAGAAAAAAGCTAA
- Protein Sequence
- MVERSSSSAGITDTDAGTQYCFKWSNYQSHLAEVMRELLDEESMVDVTIAAGGERIQAHKLVLCACSSLFADLLCHANEEHSTIILSDIAAQDIKSIVEFSYNGEVRIPVENINNLLHAAHFLKIYGLMEIEGLDETEVSNEKDISAEENYLDETVEYEDDKQAYGKGNINKKNEENKRKYSDSDSNLKYTHVKRRKSVCKRDYTDDMLNSALDEIRNGGTLLEAAAKHRIPRSTLYMRAKALGVTLNPCRNEYTLDDMKQAIEAVLSGSSLQQAADMHGIPKTVLWRRIQKEGYRSNRHDTRKNYAPDRREAAIKALQRGEGLTKVANEYKIPKTTLFRDKARLVDQGKLPSTFWKRRKTDGEEHKQVRLEEAVAACKNGKMSQGTAAATYHIPKTTIWRRLQKDNKSDSDSPFKKSPKKRDSIDTKNVEIVKAEDLNEGDFEAYCPEDGEMNITYIDESNMSDDPVIILASGDVDELNLSNNRSLVVVQQEGSDDNFISCGLELDGTSFVEKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01466380; iTF_01467257; iTF_01467003; iTF_01468969; iTF_01468739; iTF_01464951; iTF_01465479; iTF_01467865; iTF_01468135; iTF_01469817; iTF_01469572;
- 90% Identity
- iTF_01466380; iTF_01467257; iTF_01467003;
- 80% Identity
- iTF_01466380;