Taio037423.1
Basic Information
- Insect
- Torymus aiolomorphi
- Gene Symbol
- lov
- Assembly
- GCA_036365515.1
- Location
- CM070874.1:76931960-76934419[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.1e-05 0.0079 18.6 0.0 1 40 205 244 205 249 0.85 2 4 3.3e-12 2.4e-09 39.5 0.0 3 39 257 292 255 299 0.88 3 4 0.00054 0.39 13.2 0.0 6 34 312 339 307 345 0.88 4 4 6.2e-11 4.5e-08 35.4 0.0 5 40 371 406 370 410 0.92
Sequence Information
- Coding Sequence
- ATGGCCGAGAGGTCTAGTAGCGGTGCCAGCAACACGGAAAGTGAATTAGGCACTCAGTACTGCTTCAAATGGAGCAATTATCAGAACCACTTGGCGGAGGTGATGCGGGAGCTCCTCGACGAGGAGTCCATGGTCGACGTTACCATCTCGGCCGGTGGCGAACGCATTCAGGCACACCGTCTGGTACTTTGCGCCTGCAGCAGCCTATTTGCGGAGCTATTGTGCCATGTAAACGAGGAACATTCTACCATAATTCTAACTGATATTGCTGCACAGGATATAAGATCAATTGTAGAATTTAGCTACAACGGAGAAGTTAGAATACCTGTGGAGAACATAAATAATCTGCTACAGGCAGCTCATTTTCTAAAGATATATGGTTTAATGGAAattgaagGCCTTGACGAGACTGAAGTTTCTGAAAAAGATATCTCTCTCCAAGAATCTTATCTTGTTGATGAAAGTGTAGACTCTGAAGATGATAAACAAGTATATGGAAAAGGAAAtattaataagaaaaatgaagaaaagaaaagaaagcaCTCAGATTCTGATTCAACTCTAAAATATACAACCATAAAACGAAGAAAGAGTGTATGTAAAAGAGATTACACTGATGATATGTTGAAATCTGCTCTTGATGAAATTCGCACAGGAGGTACACTTCTTGAAGCAGCTGCCAAACATCGTATACCTAGGTCTACTCTATATATGCGAGCAAAGGCTCTTGGTGTAACATTAAATCCATGTAGAAACGAATATACGCTTGATGATATGAAGCAAGCTATAGAGGCTGTCATAAcTGGATCTAGTTTACAGCAAGCTGCAGATATGCATGGTATACCAAAAACAGTTTTATGGAGGCGAATTCAAAAAGAAGGTTACAGATCTAATAGGCATGACACAAGAAAAAATTATGCTCCTGACAGAAGAGAAGCTGCTGTAAAAGCTTTACAGAGAGGAGAAGGCCTTACCAAAGTTGCAAATGAATATAAAatcccgaaaacaacgctaTTTAGAGATAAAGCACGTCTTGTTGACCAAGGAAAATTGCCCTCAACATTTTGGAAACGACGAAAAACCGATGGAGAGGACCGTAAACAAATACGCTTAGAAGAAGCTGTGGCTGCCTGCAAAAACGGTAAAATGTCTCAAGGTACAGCTGCTGCTACTTTTCACATACCTAAAACTACTATTTGGAGACGTCTtcaaaaagataataaaaaatctgATTCAGATTCACCATCCAAAAAATCACCAAAAAAGAAGGATTCTAATAACACTAGCAGTGTAGAAGTAGTAAAAGCTGAAGAATTGAATGAGGCTGACTTCGAGGCATACTGTCCGGAGGATGGAGAAATGAGCATAACATATATGGATGAAAGTAATATGTCAGAAGATCCAGTAATTATCCTTGCAAGTGGAGATGTTGATGAATTGAATTTACCAAACAGTAAATCTTTGGTAGTAGTACAACAAGAAGGCAATGCTAATTTCATATCATGTGGATTGGAATTAGATGATAATTCCTTTGCAGAAAAAAGCTAA
- Protein Sequence
- MAERSSSGASNTESELGTQYCFKWSNYQNHLAEVMRELLDEESMVDVTISAGGERIQAHRLVLCACSSLFAELLCHVNEEHSTIILTDIAAQDIRSIVEFSYNGEVRIPVENINNLLQAAHFLKIYGLMEIEGLDETEVSEKDISLQESYLVDESVDSEDDKQVYGKGNINKKNEEKKRKHSDSDSTLKYTTIKRRKSVCKRDYTDDMLKSALDEIRTGGTLLEAAAKHRIPRSTLYMRAKALGVTLNPCRNEYTLDDMKQAIEAVITGSSLQQAADMHGIPKTVLWRRIQKEGYRSNRHDTRKNYAPDRREAAVKALQRGEGLTKVANEYKIPKTTLFRDKARLVDQGKLPSTFWKRRKTDGEDRKQIRLEEAVAACKNGKMSQGTAAATFHIPKTTIWRRLQKDNKKSDSDSPSKKSPKKKDSNNTSSVEVVKAEELNEADFEAYCPEDGEMSITYMDESNMSEDPVIILASGDVDELNLPNSKSLVVVQQEGNANFISCGLELDDNSFAEKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01466091;
- 90% Identity
- iTF_01465479;
- 80% Identity
- iTF_01465479;