Ttex036862.1
Basic Information
- Insect
- Torymus texanus
- Gene Symbol
- lola
- Assembly
- GCA_036873485.1
- Location
- JAYJLV010045819.1:5395-7848[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 2.8e-06 0.0047 18.6 0.0 1 37 206 242 206 249 0.86 2 5 3.1e-13 5.2e-10 40.8 0.0 3 39 258 293 256 300 0.88 3 5 0.0025 4.2 9.1 0.0 6 34 313 340 309 346 0.83 4 5 4.4 7.3e+03 -1.3 0.0 31 43 354 367 354 369 0.82 5 5 2.6e-12 4.2e-09 37.9 0.0 4 43 371 410 368 412 0.93
Sequence Information
- Coding Sequence
- ATGGCCGATAGGTCCAGCAGTAGTGTCGACAACACGGACCTTGGACCCGGTACTCAGTACTGCTTCAAATGGAGCaattatcaaaatcatttgGCAGAGGTCGTACGAGATCTCCTCGACGAGGAGTCCATGGTCGATGTTACGATTGCGGCTGGTGGCGAACGTATCCATGCACATCGACTAGTACTTTGCGCTTGTAGCAGTTTATTCGCGGATCTTTTGTGTCATGTGAACGAGGAACATTCTACTATAATCCTTCCTGATATAGCTCCACAGGATATACGATCAATTGTAGAATTCAGCTACAATGGAGAAGTTAGAATACCCgtggaaaacataaataatctCCTAGAAGCAGCTCACTTTCTAAAGATATATGGTTTGATGGAAatcgaAGGCCTTGATGAGACTGAAGCTTCTAATGAAAAAGATGTCTCTGGCGAAGAATGTTATGGTCTTGATGAAAATACAGAGTATGAAGATAATAAACAGGTGTTTACAAAAGGAAATGTTAATAAGacaaatgaagaaaagaaaagaaaatattcagaTTCTGATTCAAACCTAAAATATACAACCATAAAACGAAGAAAGAGTGTATGTAAGAGAGATTACACTGATGAAATGTTAAAATCTGCTCTTAATGAAATTCGTAATGGAGGCACTCTGCTTGAAGCAGCTGCCAAACATTGTATACCTAGGTCTACTCTGTACATGCGAGCAAAGGCTCTTGGTATAGCATTAAATCCGTGTAGAAACGAATATACACTTGAAGATATGAAGCAAGCTATAGAAGCTGTCGTAACTGGATCAAGTTTACAACAAGCTGCAGATATGTTTGGTATACCAAAAACAGTTTTATGGAGGCGGATTCAGAAAGAAGGTTACAGGTCTAACAGGCATGACACACGAAAAAATTATGCTCCTGATAAAAGAGAAGCTGCTGTAAAAGCTttagagagaggagagggtcTTACCAAAGTTGCAAATGAATATAAAattCCGAAAACAACGCTATTTAGGGATAAAGCACGTCTTGTTGACGAGGGAAAATTACCTTCAACATTTTGGAAGAAACGTAAAAGCGATGGAGAGAACCATAAACACCTACGTCTAGAAGAAGCTGTAGCTGCCTGCAAAAACGGTAAAATGTCTCAAGGTACAGCCGCGGCTACTTATCACATACCTAAAACTACTATTTGGAGACGTCTTCAAAAAGATAATCAAAAATCTGATTCAGATTCATCACCTAAAAAATCACCAAAGAAGAGGGATTCAAATGGTGATAAAGCTGTAGAGGTGATAAAAGCAGAAGAGTTGAATGAGGCCGATTTTGAGGCATACTGTCCGGAGGATGGAGAAATGAGTATAACATATATTGATGAAAGTAATATGTCAGAAGATCCAGTAATTATTCTTGCAAGTGGAGATGTTGATCAATTGAATTTACCAAACAGTAGGTCTTTGGTAGTAGTTCAGCAAGACggcaacgaaaataattttatatcatgcGGACTGGAATTAGATGATAATACctatgaagaaaaaagctaa
- Protein Sequence
- MADRSSSSVDNTDLGPGTQYCFKWSNYQNHLAEVVRDLLDEESMVDVTIAAGGERIHAHRLVLCACSSLFADLLCHVNEEHSTIILPDIAPQDIRSIVEFSYNGEVRIPVENINNLLEAAHFLKIYGLMEIEGLDETEASNEKDVSGEECYGLDENTEYEDNKQVFTKGNVNKTNEEKKRKYSDSDSNLKYTTIKRRKSVCKRDYTDEMLKSALNEIRNGGTLLEAAAKHCIPRSTLYMRAKALGIALNPCRNEYTLEDMKQAIEAVVTGSSLQQAADMFGIPKTVLWRRIQKEGYRSNRHDTRKNYAPDKREAAVKALERGEGLTKVANEYKIPKTTLFRDKARLVDEGKLPSTFWKKRKSDGENHKHLRLEEAVAACKNGKMSQGTAAATYHIPKTTIWRRLQKDNQKSDSDSSPKKSPKKRDSNGDKAVEVIKAEELNEADFEAYCPEDGEMSITYIDESNMSEDPVIILASGDVDQLNLPNSRSLVVVQQDGNENNFISCGLELDDNTYEEKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01466091;
- 90% Identity
- iTF_01468969;
- 80% Identity
- iTF_01468969;