Tyan047470.1
Basic Information
- Insect
- Topomyia yanbarensis
- Gene Symbol
- Lztr1
- Assembly
- GCA_030247195.1
- Location
- CM058070.1:71364004-71366626[+]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.3e-14 9.4e-12 47.1 0.5 2 107 366 496 365 498 0.86 2 4 0.42 3.1e+02 3.6 0.0 76 108 497 529 496 531 0.89 3 4 1.9e-19 1.4e-16 62.7 0.0 8 105 590 689 584 694 0.85 4 4 2.9 2.1e+03 0.9 0.0 77 101 693 717 688 725 0.82
Sequence Information
- Coding Sequence
- ATGACCAGTGCAAATCGCTTCACATCGCCCACGCCTTCGGCCGGGCTTATAACACCGAGTACGAGTGGAACTACGACAGCTCCGACCGGACCGATTCCTAGCGCTGCCAACAAGTGGAAGCGAATGCTTGAATGTGATGAGTTTGTCGGGGCTAGACGATCGAAACACACGGTGGTCGCCTACAAAGACGCAATCTACGTGTTCGGAGGAGATAATGGCAAAAACATGCTCAATGATTTGATTCGCTTCGGAGTGAAGGACAAGTCCTGGGGTAGGGCATTTTCGACGGGAACTCCTCCAGCACCCCGGTACCATCATTCGGCGGTCGTGCACGGTACGTCGATGTTTGTGTTCGGCGGCTACACCGGTGATATCCATTCGAACTCCAATTTGACAAATAAAAATGACCTATTTGAGTATAACTTCCAAAATGGTCAGTGGACCGAGTGGAAATTTGTCGGAAGGACACCGGTACCCCGAAGTGCTCATGGAGCGGCCGTTTTTGAGAATAAGTTGTGGATTTATGCCGGGTACGATGGAAATGCTCGTTTGAACGATATGTGGACGATCAGGTTAACGgGAGAAACCCACCAATGGGAAGAGGTGCAGCAAAAAGGTGATCGTCCGCCAACGTGTTGCAATTTCCCGGTAGCCGTTGCAAGGGGCTGTATGTACGTGTTCTCTGGACAGAGCGGGCTTCAAATTACCAACACCTTGTTTCAGTTCAACTTTAAAGATAATACTTGGCGTCGCATTTCAAATGAGCATATTCTTCGGGGAGCTCCACCTCCTCCAGCACGTCGCTATGGTCACACTATGGTTCATCACGATCGATTCCTGTACGTGTTTGGAGGGGCAGCCGACTCCACGCTGCCTAACGATTTGCATTGCTACGATCTGGATTCGCAGGTCTGGTCCACGGTGATTCCGGCACCGGAGTCTCAGGTTCCAAGTGGACGCCTATTCCACGCTGCTGCTGTTATCGGAGACGCCATGTACATCTTTGGGGGAACCATCGACAACAACGTTCGCAGTGGAGATATGTACCGTTTTCAGTTTTCCAGCTATCCAAAGTGCACCCTTCAGGATGATTTCGGGAAGTTTCTTCAAAATCGACAATTCTGCGATGTGCAGTTTGTGGTCGGGACGGATGAGGTGAAAGTACCGGCTCACATTGCTATGATCGTTGCTCGTTCACAGTTTTTGCGGTCCAAAATTTTATCCGCACGCGATGCCCGAAATATTCATTTTGAGAAGCTTTTCGGTACGACAGAGGTTCCTTTCGCTGATCGCCCGTTACTGGAGGTACAGCTGCCAAGCGCCCAACCGGAAGCATTCGAAATGGTTCTCAACTACATCTATACCGATCGCATTGACTTTAAGGATCCTTTCTGCAACAAAATCGTCCTGCTGATGATGGACGTTTACCAGCTTGCTGTTCAGTTCTACATTCCTCGATTGGAGCAGCTGTGCGTGCAGTATCTGGAGTTCAAAATTTCCAAAACGAATGTTCTGGACGCGTTGTACAACGCCGATCGGATGAATCTGAAGCTCATAAAAGACCACTGCCTTGGTTTCATAACCAAGGAGGACCACTTTTACGACATTGTCATGTCGACGGAATTCGCTGCTCTGGAAAAACCACTGATAGTGGAAATCATCCGCAAGCGTTTAAATCCGAGCAAGCACTCGACCGACATGAAGTACGACAAAACGATCGGCACATCGCTGGAAAATGATATGGCAGTGTTTCTAAAGTCAGGTGGAAAAGAATTTTGTGACATCAATCTAGTGCTTGAGGGAAAAGTGATTCCGTCGCACAAGTCAATTCTGGCGGCCCGTTGTACCTATTTCCAGGCCATGTTTCGGTCTTTCATGCCAGCAGATAATACGGTGAATATCCAAATCGGTGATATCTCTCCCTCACAGGAGGCATTCAGCTCCCTGCTGCGCTACATCTACTACGGTGACACTAAAATGCCCCCGGAGGACTCGCTCTATCTTTTTCAAGCCCCTTGCTTCTACGGATTCACCAACAATCGGCTTCAAGCATTTTGCAAACACAACCTAGAGAACAACATCACCTACGATAATGTGCTGCAAATCTTGGAAGCATCGGATAAGATGAATGTTCCGGACATCAAGAACTACGCGTTGCGCATGGTGGTGCACAACTTTTCCCAGGTGGCACGGCTACCTAAGATGCAGGAACTCACCCTAGAGTTGCTGCTCGATGTCATTATGGCCGTTGCCGACACCAAGGGAGACGGGAGTAAGCGAATCAGTCACGATTCTACGTTCATAAGTTTGTACAGTGACATTTGA
- Protein Sequence
- MTSANRFTSPTPSAGLITPSTSGTTTAPTGPIPSAANKWKRMLECDEFVGARRSKHTVVAYKDAIYVFGGDNGKNMLNDLIRFGVKDKSWGRAFSTGTPPAPRYHHSAVVHGTSMFVFGGYTGDIHSNSNLTNKNDLFEYNFQNGQWTEWKFVGRTPVPRSAHGAAVFENKLWIYAGYDGNARLNDMWTIRLTGETHQWEEVQQKGDRPPTCCNFPVAVARGCMYVFSGQSGLQITNTLFQFNFKDNTWRRISNEHILRGAPPPPARRYGHTMVHHDRFLYVFGGAADSTLPNDLHCYDLDSQVWSTVIPAPESQVPSGRLFHAAAVIGDAMYIFGGTIDNNVRSGDMYRFQFSSYPKCTLQDDFGKFLQNRQFCDVQFVVGTDEVKVPAHIAMIVARSQFLRSKILSARDARNIHFEKLFGTTEVPFADRPLLEVQLPSAQPEAFEMVLNYIYTDRIDFKDPFCNKIVLLMMDVYQLAVQFYIPRLEQLCVQYLEFKISKTNVLDALYNADRMNLKLIKDHCLGFITKEDHFYDIVMSTEFAALEKPLIVEIIRKRLNPSKHSTDMKYDKTIGTSLENDMAVFLKSGGKEFCDINLVLEGKVIPSHKSILAARCTYFQAMFRSFMPADNTVNIQIGDISPSQEAFSSLLRYIYYGDTKMPPEDSLYLFQAPCFYGFTNNRLQAFCKHNLENNITYDNVLQILEASDKMNVPDIKNYALRMVVHNFSQVARLPKMQELTLELLLDVIMAVADTKGDGSKRISHDSTFISLYSDI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00285557;
- 90% Identity
- iTF_00400680; iTF_00948872; iTF_00401811; iTF_01524947;
- 80% Identity
- -