Cpip010746.1
Basic Information
- Insect
- Culex pipiens
- Gene Symbol
- -
- Assembly
- GCA_016801865.2
- Location
- NC:183812050-183818665[-]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 1.1e-13 1.5e-11 44.9 1.0 2 107 359 489 358 492 0.85 2 5 1 1.4e+02 3.2 0.0 76 108 490 522 487 524 0.89 3 5 4.4e-20 5.8e-18 65.6 0.0 8 105 583 682 577 687 0.85 4 5 5.3 7e+02 1.0 0.0 77 101 686 710 681 718 0.82 5 5 9 1.2e+03 0.2 0.0 7 35 733 763 728 764 0.79
Sequence Information
- Coding Sequence
- ATGATTCTCGCCGGAAGCAGTAGCATGGGTGGTTCCACGACGTCGGGTCCGCCCGTTCCGGCCGGCTTGCCGATTCCCAGTGCGGCCAACAAGTGGAAGCGGATGCTGGAGTGTGACGAGTTTGTCGGAGCCCGCCGGTCCAAGCACACGGTCGTGGCGTACAAGGACGCGATCTACGTGTTCGGCGGGGACAACGGAAAGAACATGCTGAACGATTTGATCCGGTTCGGGGTGAAGGACAAGTCCTGGGGGCGGGCATTTTCCACGGGGACGCCCCCTGCTCCGAGGTACCATCACTCGGCGGTGGTCCACGGGACGTCGATGTTCGTGTTTGGCGGATACACCGGGGACATTCACTCGAACTCGAACTTGACCAACAAGAACGACCTGTTTGAGTACAACTTCCAGAACGGGCAGTGGACCGAGTGGAAGTTTGTGGGGAGGACGCCGGTGCCGCGGAGTGCGCATGGGGCGGCCGTCTACGATAATAAGCTGTGGATCTACGCCGGGTACGATGGGAACGCCCGGTTGAACGACATGTGGACAATCCGGCTAACTGGGGAAACCCACCAGTGGGAAGAGGTCCAGCAGAAGGGCGAATGTCCTCCGACGTGTTGCAATTTCCCGGTGGCCGTCGCCCGCGGCTGCATGTACGTGTTCTCCGGCCAAAGTGGCTTGCAAATCACCAACACGTTGTTCCAGTTCAACTTCAAGGACAAAACATGGCGTCGAATCTCAAACGAGCACATCCTCCGAGGAGCTCCTCCTCCGCCAGCCCGTCGTTACGGCCACACCATGGTCCACCATGACCGGTTCCTGTACGTGTTTGGTGGTGCCGCAGACTCGACCCTCCCGAACGACCTTCACTGCTACGATCTGGACTCCCAGGTCTGGTCCACGGTCATTCCCGCTCCGGAATCGCAAGTCCCAAGTGGCCGCCTCTTTCACGCGGCCGCCGTCATCGGTGACGCCATGTACATCTTCGGCGGAACGATCGACAACAATGTGCGCAGCGGAGACATGTACCGGTTCCAGTTCTCGAGCTATCCGAAATGCACCCTTCAGGACGACTTTGGCAAGTTCCTTCAAAATCGTCAGTTTTGCGACGTTCAGTTTGTCGTCGGAGCGGACGAGGCGAAGGTTTCCGCCCACATCGCCATGATTGTGGCGCGGTCGCAGTTTCTGAGGGCGAAGATATTGGCCGCCCGAGACGCCAGGAATCTGCACTTTGAGAAGCTGTTCGGGACGACGGAGGTGCCGTTTGCGGAGCGACCGATTCTGGAGGTCAAGCTGCCGAACGCGCAGCCGGAGGCGTTCGAGATGGTGCTGAACTATATCTACACCGATCGGATTGATTTCAAGGACCCATTCTGCAACAAGATCGTCCTCCTCATGATGGACGTGTACCAACTGGCCGTCCAATTCTACATCCCCCGCCTTGAGCAACTGTGCGTGCAATATCTCGAGTTCAAAATCTCCAAAACCAACGTTCTGGACGCACTCTACAATGCGGATCGCATGGGCCTCACCCTGATCAAGGATCACTGCATGGGATTTATCACAAAGGACGACCACTTTAACGATATCGTCATGTCGCCCGAGTTTGCCGCCCTCGAGAAGATGCTGATCGTGGAGATCATCCGGAAGAAGCAAAATCCGAGCAAGCACTCGACCGATATGAAGTACGACAAGACGATTGGGACTTCGCTGGAGAACGATATGGCGGTGTTTTTGAAGTCTGGTGGGAAGGAGTTTTGCGACATTAACTTGGTGCTGGAGGGGAAGGTCATTCCGGCGCACAAGTCTATCCTGGCGGCACGGTGCACCTACTTCCAGGCCATGTTCCGATCGTTTATGCCGGCGGACAATACCGTTAATATCCAAATCGGTGATATTTCCCCCTCCCAGGAAGCGTTCAGCTCCCTCCTCCGTTACATCTACTACGGCGACACCAAAATGCCCCCGGAGGACTCGCTGTATCTTTTTCAGGCCCCCTGCTTCTACGGGTTCACCAACAACCGACTGCAGGCCTTCTGCAAGCACAACCTAGAGAACAACATCACGTACGACAACGTGCTGCAGATCCTCGAGGCTTCCGACAAGATGAACGTCCCGGACATCAAGAACTACGCCCTCCGCATGGTCGTGCACAACTTTTCCCAGGTCGCGCGGCTGCCCAAGATGCAGGAGCTGACGCGGGAACTGCTGCTGGACGTGATACTGGCCGTCGCGGACAAAGGGGACAAGCGGATAAGCCACGACTCGACGTTCATCTCGCTGTACAGCGACATTTGA
- Protein Sequence
- MILAGSSSMGGSTTSGPPVPAGLPIPSAANKWKRMLECDEFVGARRSKHTVVAYKDAIYVFGGDNGKNMLNDLIRFGVKDKSWGRAFSTGTPPAPRYHHSAVVHGTSMFVFGGYTGDIHSNSNLTNKNDLFEYNFQNGQWTEWKFVGRTPVPRSAHGAAVYDNKLWIYAGYDGNARLNDMWTIRLTGETHQWEEVQQKGECPPTCCNFPVAVARGCMYVFSGQSGLQITNTLFQFNFKDKTWRRISNEHILRGAPPPPARRYGHTMVHHDRFLYVFGGAADSTLPNDLHCYDLDSQVWSTVIPAPESQVPSGRLFHAAAVIGDAMYIFGGTIDNNVRSGDMYRFQFSSYPKCTLQDDFGKFLQNRQFCDVQFVVGADEAKVSAHIAMIVARSQFLRAKILAARDARNLHFEKLFGTTEVPFAERPILEVKLPNAQPEAFEMVLNYIYTDRIDFKDPFCNKIVLLMMDVYQLAVQFYIPRLEQLCVQYLEFKISKTNVLDALYNADRMGLTLIKDHCMGFITKDDHFNDIVMSPEFAALEKMLIVEIIRKKQNPSKHSTDMKYDKTIGTSLENDMAVFLKSGGKEFCDINLVLEGKVIPAHKSILAARCTYFQAMFRSFMPADNTVNIQIGDISPSQEAFSSLLRYIYYGDTKMPPEDSLYLFQAPCFYGFTNNRLQAFCKHNLENNITYDNVLQILEASDKMNVPDIKNYALRMVVHNFSQVARLPKMQELTRELLLDVILAVADKGDKRISHDSTFISLYSDI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00285557;
- 90% Identity
- iTF_01462082;
- 80% Identity
- iTF_00401811;