Cqui004657.1
Basic Information
- Insect
- Culex quinquefasciatus
- Gene Symbol
- Lztr1
- Assembly
- GCA_015732765.1
- Location
- NC:39498981-39503847[-]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 4.8e-14 8.6e-12 44.9 1.0 2 107 359 489 358 492 0.85 2 5 0.43 77 3.2 0.0 76 108 490 522 487 524 0.89 3 5 1.8e-20 3.3e-18 65.6 0.0 8 105 583 682 577 687 0.85 4 5 2.2 4e+02 1.0 0.0 77 101 686 710 681 718 0.82 5 5 3.7 6.8e+02 0.2 0.0 7 35 733 763 728 764 0.79
Sequence Information
- Coding Sequence
- ATGATCCTCGCCGGAAGCAGCAGCATGGGCGGTTCCACGACGTCGGGACCGCCCGTTCCGGCCGGCTTGCCGATTCCGAGTGCGGCCAACAAGTGGAAGCGGATGCTGGAGTGTGACGAGTTTGTGGGCGCCCGCCGGTCCAAGCACACGGTCGTGGCGTACAAGGACGCGATCTACGTGTTCGGCGGGGACAACGGCAAGAACATGCTGAACGATTTGATCCGGTTCGGGGTGAAGGACAAGTCCTGGGGGAGGGCATTTTCCACAGGGACGCCACCGGCTCCGAGGTACCATCACTCGGCGGTGGTCCATGGGACGTCGATGTTCGTGTTTGGCGGATACACCGGGGACATTCACTCGAACTCGAACTTGACCAACAAGAACGACCTGTTTGAGTACAACTTCCAGAACGGGCAGTGGACCGAGTGGAAGTTTGTGGGGAGGACGCCGGTGCCACGGAGTGCGCATGGGGCGGCCGTTTACGATAATAAGCTGTGGATATATGCTGGATACGATGGGAATGCCCGGTTGAACGACATGTGGACAATCCGGCTGACCGGAGAAACCCACCAGTGGGAAGAGGTCCAGCAGAAGGGTGAATGTCCTCCGACGTGTTGCAATTTCCCGGTGGCCGTTGCCCGTGGCTGCATGTACGTGTTCTCCGGCCAAAGTGGCTTGCAAATAACCAACACACTGTTCCAGTTCAACTTCAAGGACAAAACATGGCGTAGAATCTCAAATGAGCACATCCTTCGGGGAGCTCCTCCACCGCCAGCCCGTCGCTATGGCCACACCATGGTCCACCATGACCGGTTCCTGTACGTGTTTGGCGGTGCCGCAGACTCGACCCTCCCGAACGACCTCCACTGTTACGATCTGGACTCCCAGGTCTGGTCCACGGTAATTCCCGCTCCGGAATCGCAAGTCCCAAGTGGCCGCCTCTTTCACGCGGCTGCCGTTATCGGTGACGCCATGTACATCTTCGGCGGGACGATCGACAACAATGTGCGTAGCGGAGACATGTACCGGTTCCAGTTCTCAAGCTATCCAAAATGCACGCTTCAGGATGACTTTGGCAAGTTCCTCCAAAACCGACAGTTTTGCGACGTTCAGTTTGTCGTCGGAGCGGACGAGGCGAAGGTTTCTGCCCACATTGCCATGATTGTGGCGCGGTCGCAGTTTCTGAGGGCGAAGATATTGGCTGCGCGTGACGCCAGAAATCTGCACTTTGAGAAGCTGTTTGGGACGACGGAGGTGCCGTTTGCGGAGCGGCCGATTCTGGAGGTCAAGTTGCCGAATGCGCAGCCGGAAGCGTTCGAGATGGTGCTGAACTACATCTACACCGATCGGATTGATTTCAAGGACCCATTCTGCAACAAGATCGTCCTCCTCATGATGGACGTGTACCAACTGGCCGTCCAATTCTACATCCCCCGCCTCGAGCAACTGTGCGTACAATATCTCGAGTTCAAAATCTCCAAAACCAACGTTCTGGACGCACTCTACAATGCGGACCGCATGGGTCTCACCCTGATCAAGGATCACTGCATGGGATTTATCACAAAGGACGACCACTTTAACGATATCGTCATGTCGCCCGAGTTTGCCGCCCTCGAGAAGATGCTGATCGTGGAGATCATCCGGAAGAAGCAAAACCCGAGCAAGCACTCGACCGACATGAAGTACGACAAAACGATCGGAACTTCGTTGGAGAACGATATGGCGGTGTTTTTGAAGTCTGGCGGGAAGGAGTTTTGCGACATTAATTTGGTGTTGGAAGGGAAGGTTATTCCGGCGCACAAGTCTATCCTGGCGGCACGGTGCACCTACTTCCAGGCCATGTTCCGATCGTTTATGCCGGCGGACAATACCGTTAATATCCAAATCGGTGACATTTCCCCCTCCCAGGAGGCGTTCAGCTCCCTCCTCCGTTACATCTACTACGGCGACACCAAGATGCCCCCGGAGGACTCGCTCTATCTTTTTCAGGCCCCCTGCTTCTACGGGTTCACCAACAACCGACTGCAGGCCTTCTGCAAGCACAACCTAGAGAACAACATCACGTACGACAACGTGCTACAAATTCTCGAAGCTTCCGACAAGATGAACGTCCCGGACATCAAGAACTACGCCCTCCGCATGGTCGTGCACAACTTTTCCCAGGTCGCGCGGCTGCCCAAGATGCAGGAACTGACGCGGGAACTGCTGCTGGACGTGATACTGGCCGTCGCGGACAAAGGGGACAAGCGGATAAGCCACGACTCGACGTTTATCTCGCTGTACAGCGACATTTGA
- Protein Sequence
- MILAGSSSMGGSTTSGPPVPAGLPIPSAANKWKRMLECDEFVGARRSKHTVVAYKDAIYVFGGDNGKNMLNDLIRFGVKDKSWGRAFSTGTPPAPRYHHSAVVHGTSMFVFGGYTGDIHSNSNLTNKNDLFEYNFQNGQWTEWKFVGRTPVPRSAHGAAVYDNKLWIYAGYDGNARLNDMWTIRLTGETHQWEEVQQKGECPPTCCNFPVAVARGCMYVFSGQSGLQITNTLFQFNFKDKTWRRISNEHILRGAPPPPARRYGHTMVHHDRFLYVFGGAADSTLPNDLHCYDLDSQVWSTVIPAPESQVPSGRLFHAAAVIGDAMYIFGGTIDNNVRSGDMYRFQFSSYPKCTLQDDFGKFLQNRQFCDVQFVVGADEAKVSAHIAMIVARSQFLRAKILAARDARNLHFEKLFGTTEVPFAERPILEVKLPNAQPEAFEMVLNYIYTDRIDFKDPFCNKIVLLMMDVYQLAVQFYIPRLEQLCVQYLEFKISKTNVLDALYNADRMGLTLIKDHCMGFITKDDHFNDIVMSPEFAALEKMLIVEIIRKKQNPSKHSTDMKYDKTIGTSLENDMAVFLKSGGKEFCDINLVLEGKVIPAHKSILAARCTYFQAMFRSFMPADNTVNIQIGDISPSQEAFSSLLRYIYYGDTKMPPEDSLYLFQAPCFYGFTNNRLQAFCKHNLENNITYDNVLQILEASDKMNVPDIKNYALRMVVHNFSQVARLPKMQELTRELLLDVILAVADKGDKRISHDSTFISLYSDI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00285557;
- 90% Identity
- iTF_01462082;
- 80% Identity
- iTF_00400680;