Basic Information

Insect: Tipula unca
Gene Symbol: stc
Assembly: GCA_951394425.1
Location: OX596381.1:135044003-135047006[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 1.8 4.6e+04 -4.0 1.6 15 19 298 302 297 302 0.81

2 16 0.084 2.1e+03 0.3 0.3 4 10 331 337 330 337 0.95

3 16 4.1e-07 0.01 17.3 17.3 3 19 344 360 343 360 0.93

4 16 2 5e+04 -4.2 1.3 6 10 386 390 386 390 0.96

5 16 0.0029 72 5.0 8.7 3 19 398 414 396 414 0.91

6 16 0.82 2.1e+04 -2.9 0.9 6 10 444 448 443 448 0.89

7 16 2.4e-06 0.061 14.8 12.6 1 19 454 472 454 472 0.93

8 16 0.31 7.7e+03 -1.5 0.9 5 10 502 507 502 507 0.96

9 16 0.00089 22 6.6 10.1 4 18 520 534 513 535 0.87

10 16 0.021 5.1e+02 2.2 11.3 1 11 575 585 575 597 0.91

11 16 7.3e-10 1.8e-05 26.1 15.3 1 18 602 619 602 620 0.97

12 16 1.2 2.9e+04 -3.4 1.2 6 10 649 653 648 653 0.85

13 16 2 5e+04 -9.9 11.2 14 18 672 676 656 677 0.74

14 16 0.00077 19 6.8 7.5 1 16 713 728 713 735 0.85

15 16 0.0002 5.1 8.6 11.9 2 19 746 764 745 764 0.91

16 16 1 2.5e+04 -3.2 1.7 8 12 780 784 773 784 0.65

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	1.8	4.6e+04	-4.0	1.6	15	19	298	302	297	302	0.81
2	16	0.084	2.1e+03	0.3	0.3	4	10	331	337	330	337	0.95
3	16	4.1e-07	0.01	17.3	17.3	3	19	344	360	343	360	0.93
4	16	2	5e+04	-4.2	1.3	6	10	386	390	386	390	0.96
5	16	0.0029	72	5.0	8.7	3	19	398	414	396	414	0.91
6	16	0.82	2.1e+04	-2.9	0.9	6	10	444	448	443	448	0.89
7	16	2.4e-06	0.061	14.8	12.6	1	19	454	472	454	472	0.93
8	16	0.31	7.7e+03	-1.5	0.9	5	10	502	507	502	507	0.96
9	16	0.00089	22	6.6	10.1	4	18	520	534	513	535	0.87
10	16	0.021	5.1e+02	2.2	11.3	1	11	575	585	575	597	0.91
11	16	7.3e-10	1.8e-05	26.1	15.3	1	18	602	619	602	620	0.97
12	16	1.2	2.9e+04	-3.4	1.2	6	10	649	653	648	653	0.85
13	16	2	5e+04	-9.9	11.2	14	18	672	676	656	677	0.74
14	16	0.00077	19	6.8	7.5	1	16	713	728	713	735	0.85
15	16	0.0002	5.1	8.6	11.9	2	19	746	764	745	764	0.91
16	16	1	2.5e+04	-3.2	1.7	8	12	780	784	773	784	0.65

Sequence Information

Coding Sequence: atgtcacaaaattattatggaCCGTATTGTGATGGAGCTCAGTTCTTTAGTCAGTTTCAAAATAATGTCGATGCGCAGTATTATTACCATGTCAATGGAGTACCCCAGTATAACTACTACGGGAATGAGTTTGCGCCTCCACAGCCTAGGCCACAGCATCAGAATTATCAATCTCAATATGTCCCGCCGACGACTCAGTATAGTTTTCAAATTGAGAATTCCACCCTGGTTCCGACAGCTGCTGAATTTGTGCCAAGCTGGTTGAACAAAGAAGGGGCCACCACTTCGAATGGGACCAGCTCGAATAATGCTCAGGAAGATGTATCGAGTACGGTAGATGAACTCTCAAATCTATCATTGAATTCGTCGAACAAAAGTGATCGTGATAATTATCGGGTGGATAATAACCAAAGAGGATCGGGAAATAGGAGGATTTCCTATAAAGATAATCGAAATGATTATCGTGAGAATGATAGCTATAGGAATAATCATCGGCCCCGTTATGATAATAACTATAACAGCCGATataccaacaataataataataataattatcgatACGAAGATAATTCTCGTTACAACAATAATCGATCACGGAACACGTACAAAAAGGATAATGGTAAGCCTCTACATAAATCAAAATCTGGGCTACAATCGGGAGTTCAATCATCATCCTCGGCCGAATCTGTGCCAGAcccgaaaattgaaaaattatcgcAACGGGATAATTTATCGCACGAAATTGATTCCGGCAAGCTGGAATGTCTTGTGTGCTGTGAGAATATCAAGCCATATCAATCCATATGGTCGTGCAGCAACTGCTATCATATTCTGCATTTGAATTGTACCATAAAATGGGCGCACAGTTCGAAATCGGATGATGGATGGCGGTGTCCTGCTTGTCAGAATGTTTCACAGAAAATTCCACGCGACTATTACTGCTTTTGTGGCAAGACAAAAAATCCccaaaataattacaatgattTGGCTCACAGTTGTGGAGAGTTGTGCGAACGTAAAAATGGTTGTGAACATAGCTGTACGCAACTGTGTCATCCAGGGCCGTGTCCACCGTGCCAGGCCACCGTGACGCGGTATTGTGGATGTGGCAAATCGAATCGAATCATGCAATGCAATCAAAAGAATGATATTGTATGCGAAAAGATTTGCGAGAAGCTGCTAAGCTGTGAACTACatgattgtaaattaaaatgccaTCAAGATGATTGTGAAGTGTGTTCAGAAAAGTTTACGTTCAAGTGTTACTGTGGCAGAAATACACGTGAAGTTCCGTGCGACATCGATAATCCGACTTTGGCCAATTATAGTTGCGAAAAGATATGCAATCGAATGTTGTCATGTCAAAATCATCGTTGCCTGAAAATTTGCCATCCTGGCGAATGTGGTGATTGTAAGCTATCGCCGGATACGATTAAATCGTGCCCGTGTGGAAAAACTCGAATAGTTGCGGGTCAACGAAAGTCGTGTCTAGATCCAGTGCCAACATGCAATCGAGTCTGTAAAAAGCCGCTTCCGTGTGGCCCACGTCGTGCACCTCATTTGTGTACTGGCAAATGTCATTCTGGGAATTGTTTGGCTTGCAATAAAGAAACAGCTGTTAAATGTCGTTGCGGTCAAATGGATCAAATGGTAAAATGTCGTGAGCTTCAAACTCGTGCGGATGATGCACGTTGCAAGAAGCGATGCACTAAGAAACGAAATTGTGGCAAGCACAAGTGTAATCAAGAGTGTTGTATTGATATTGATCATATATGCCCGATCCCGTGTAACCATCAGTTGTCGTGTGGAAAGCATAAATGCGATAAGCCATGCCACAAAGGACGTTGTCCACCATGTTATCGTAGTTCTTTCGAAGAGCTATACTGTGAGTGTGGTGTGAATGTTATATATCCTCCAGTGCCTTGTGGAACTAAACGGCCAGAGTGTGAAAATCCATGCACACGGCAACACGCGTGTGATCATCCTGTGCAACATAATTGCCATTCTATTGCAACCTGTCCACCATGTATGATCCTAACCACAAAACACTGTTATGGAAAACATGAACAGCGCAAAACTATTCCCTGTAGTCAAGAAGATTTTAGTTGTGGTATGCCGTGCAACAAACCGTTACCTTGTAATCGGCACAAATGTATTCGAAGTTGTCACAAAGATGCTTGTGCAATTGAGGGTGAAGTATGTAAACAGAATTGCACAACCATACGTACAACTTGCGCCCATAAATGCAATGCTCCATGTCATGAAGCTGAATGTCCCGATACACCATGTCGAGAAACTGTTGAAGTCACTTGCCAATGTGGCCACCGGAAACAAACTCGTACCTGTCATGATTTTGCGAAAGATTTTCGACGCATTGCAACTGCCAATCTAGCATCATCTATGCAAGAAATGCAACGCGGCCAATCGGTAGAACTCAGTGATATATTCGGTCCAGTGCGTGTAAGCGCGAGTAGTAACAAGACGCTAGAGTGTACAGAAGAATGTCGTGTTGTCGATCGTAATCGTCGCCTCGATATAGCGCTTCAGATCCGAAATCCTGATGTTTCATCAAAACTTCAGCCAAAGTATTCCGATTACCTAAGGTCATGGGGCAAGAAGGATCCCAAATTTATCGAGACTGTGCACGATAAACTAACTGAGTTGGTAAAATTATCGAAGGATAGCAAACAGAAATCTCGTAGTCATTCATTCCCAACGATGAATCGTGATAAGCGGCAAGTGGTTCATGAAATGTGCAGTATGTTTGGTGTTGAATCAGTCGCTTATGATGCAGAACCAAATCGTAATGTTGTGGCCACGGCTTACAAGGATCGGTCGTGGCTCCCAGCAATGAGTATCCTTGAAGTTTTACAGCGTGAGGGTGGTCAACGACGAATTCCCGTTCCGCAGAATGCGTGGGGTATAAAAAAATGA
Protein Sequence: MSQNYYGPYCDGAQFFSQFQNNVDAQYYYHVNGVPQYNYYGNEFAPPQPRPQHQNYQSQYVPPTTQYSFQIENSTLVPTAAEFVPSWLNKEGATTSNGTSSNNAQEDVSSTVDELSNLSLNSSNKSDRDNYRVDNNQRGSGNRRISYKDNRNDYRENDSYRNNHRPRYDNNYNSRYTNNNNNNNYRYEDNSRYNNNRSRNTYKKDNGKPLHKSKSGLQSGVQSSSSAESVPDPKIEKLSQRDNLSHEIDSGKLECLVCCENIKPYQSIWSCSNCYHILHLNCTIKWAHSSKSDDGWRCPACQNVSQKIPRDYYCFCGKTKNPQNNYNDLAHSCGELCERKNGCEHSCTQLCHPGPCPPCQATVTRYCGCGKSNRIMQCNQKNDIVCEKICEKLLSCELHDCKLKCHQDDCEVCSEKFTFKCYCGRNTREVPCDIDNPTLANYSCEKICNRMLSCQNHRCLKICHPGECGDCKLSPDTIKSCPCGKTRIVAGQRKSCLDPVPTCNRVCKKPLPCGPRRAPHLCTGKCHSGNCLACNKETAVKCRCGQMDQMVKCRELQTRADDARCKKRCTKKRNCGKHKCNQECCIDIDHICPIPCNHQLSCGKHKCDKPCHKGRCPPCYRSSFEELYCECGVNVIYPPVPCGTKRPECENPCTRQHACDHPVQHNCHSIATCPPCMILTTKHCYGKHEQRKTIPCSQEDFSCGMPCNKPLPCNRHKCIRSCHKDACAIEGEVCKQNCTTIRTTCAHKCNAPCHEAECPDTPCRETVEVTCQCGHRKQTRTCHDFAKDFRRIATANLASSMQEMQRGQSVELSDIFGPVRVSASSNKTLECTEECRVVDRNRRLDIALQIRNPDVSSKLQPKYSDYLRSWGKKDPKFIETVHDKLTELVKLSKDSKQKSRSHSFPTMNRDKRQVVHEMCSMFGVESVAYDAEPNRNVVATAYKDRSWLPAMSILEVLQREGGQRRIPVPQNAWGIKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01460819;
90% Identity: iTF_01054913; iTF_01052866; iTF_01054012; iTF_01054013; iTF_01458034; iTF_01460819; iTF_01457025; iTF_01455352;
80% Identity: -