Tlat007758.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tipula lateralis
Gene Symbol
stc
Assembly
GCA_963932295.1
Location
OZ010736.1:100476370-100479360[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 1.8 3.5e+04 -4.0 1.6 15 19 293 297 292 297 0.81
2 16 0.084 1.6e+03 0.3 0.3 4 10 326 332 325 332 0.95
3 16 4.1e-07 0.008 17.3 17.3 3 19 339 355 338 355 0.93
4 16 1.9 3.8e+04 -4.1 1.8 6 10 381 385 381 385 0.97
5 16 7.5e-05 1.5 10.0 9.0 3 18 393 408 391 409 0.91
6 16 0.81 1.6e+04 -2.9 0.6 6 10 439 443 438 443 0.89
7 16 4.1e-07 0.008 17.3 14.5 1 19 449 467 449 467 0.93
8 16 0.3 6e+03 -1.5 0.9 5 10 497 502 497 502 0.96
9 16 0.0013 26 6.0 11.1 4 18 515 529 508 530 0.87
10 16 0.02 4e+02 2.3 11.3 1 11 570 580 570 592 0.91
11 16 7.2e-10 1.4e-05 26.1 15.3 1 18 597 614 597 615 0.97
12 16 0.93 1.8e+04 -3.1 1.1 6 10 644 648 643 649 0.82
13 16 2 3.9e+04 -8.6 11.0 10 18 662 671 651 672 0.75
14 16 0.0023 45 5.3 8.2 1 15 708 722 708 730 0.91
15 16 0.00014 2.7 9.2 11.4 4 19 742 759 740 759 0.93
16 16 1 2e+04 -3.2 1.7 8 12 775 779 768 779 0.65

Sequence Information

Coding Sequence
ATGTCACAAAATTATTATGGACCATACTGTGATGGGGCTCAGTTCTTtaatcaatttcaaaataatgtcgATGCGCAGTATTACTACCATGTAAATGGGGTGCCTCAATATAATTACTACGGAAATGAGTTTCCTCCCCCACAACAAAGGGTGCAGGTGCAACATCAAAACTATCAATCCCAATATGTACCACCGTCGACGCAGTATagttttcaaattgaaaattctaCACTGGTTCCGACAGCTGCTGAATTCGTGCCAAGCTGGTTGAATAAGGAAGGGGCCACCAATACGAACGGAACAAGTTTGAATAGTGCTCAAGAAGATGTATCGAGTACTATAGACGAGCTTTCAAATTTATCGTTGAATTCGTCGAATAAAAATGATCGGGATCATCGGGTGGAAAATAATAACCAAAGAAGTACGGGAAATAGGATCACATATAAAGATAATCGAAACGATTATCGTGAAAACGATAACTATCGGAACAATCATCGCCCCCGTTATGAGAATAATTATAACAGTCGATATAATAATTATCGTTATGAAGATAATTCTCGTTACAACAATAATCGATCGCGGAATACTTATAAGAAGGATAATAGTAAACCTTTGCATAAATCAAAATCCGGGATACAATCCGGAGTTCAATCATCTTCCTCAGCCGAATCTGTACCTGatccaaaaatagaaaaactatCTCAACGCGATAATTTGTCGCACGAAATTGATTCGGGTAAGCTGGAGTGTCTTGTATGCTGTGAAAATATCAAACCATATCAATCTATATGGTCATGCAGCAACTGTTATCatattttgcatttgaattgTACCATTAAATGGGCACACAGTTCGAAATCAGACGATGGATGGCGGTGTCCAGCTTGTCAGAATGTTTCGCAGAAAATTCCTCGAGATTACTATTGCTTTTGTGGCAAAACGAAAAATCCACAGAATAATTACAATGATTTGGCGCACAGTTGTGGTGAGTTGTGTGAACGTAAAAATGGATGTGAACATAGTTGTACTCAACTGTGCCATCCGGGACCGTGTCCACCGTGTCAGGCGACCGTTACACGATACTGTGGCTGTGGTAAATCAAGTATGCTGATGCAATGCAATCAAAAGAATGATATTGTATGTGAACAGATTTGTGAGAAGCTCTTAAGCTGTGAGTTACacgattgtaaattaaaatgcCATCAAGGTGATTGTGAAATGTGTGCCGAAAAATTTTCGTTCAAATGCTATTGTGGTAAAAATACACGTGAAGTACCGTGCGATATCGATAATGCAACTATGGCAAACTATAGTTGCGAAGCGTTGTGTAATCGAATGCTATCGTGTCAAAACCATCGGTGTCAGCAAATTTGCCATCCCGGCGAATGCGGTGATTGTAAACTAGCTCCGGATACAATAAAATCTTGTCCCTGTGGAAAAACACGAATTGTTGCTGGTCAACGAAAATCGTGTCTTGATCCAGTGCCAACATGTAATCGAGTATGTAAAAAACCTCTTCCATGTGGTCCGCGTCGTGCACCACATTTATGTACCGGAAAATGTCATCCCGGAAATTGTTTAGCCTGCAATAAGGAAACAGCTGTTAAATGCCGGTGTGGCCAAATGGATCAGATGGTAAAATGTCGTGAGCTTCAAACTCGTGCAGATGATGCCCGGTGTAAAAAACGATGCACGAAGAAGCGTAATTGTGGCAAACACAAGTGTAATCAAGAGTGTTGTATCGACATTGATCATATATGCCCGATTCCATGCAATCATCAGTTATCATGTGGGAAACATAAATGCGATAAGCCATGTCATAAAGGACGTTGTCCACCGTGTTATCGAAGCTCTTTCGAAGAACTATATTGTGAATGTGGTGTAAATGTTATTTATCCTCCAGTGCCTTGCGGAACAAAACGGCCAGAGTGTGAAAATCCGTGCACACGTCAACATCCTTGCGATCATCCTGTGCAACACAATTGTCATTCAGCTGCAACCTGCCCaccatgtatgattttaaccaCGAAACATTGTTATGGAAAACATGAACAGCGCAAAACAATTCCATGTAGTCAAGAAGATTTTAGTTGCGGTATGCCATGCAATAAGCCCCTACCATGCAATCGACACAAATGCATTCGAAATTGTCACAAAGATGATTGTACCATCGAAGGAGaaatatgtaaacaaaattgTACCACAATTCGTACAACTTGTGTTCACAAGTGTAATGCACCATGCCATGATGACGATTGTCCTGATACGCCATGTCGAGAAACTGTCGAAGTCAGCTGTCAATGTGGTCATCGGAAACAAACTCGTACCTGTCATGATTTTGCAAAAGATTTTCGCCGCATAGCAACCGCCAATCTTGCATCATCCATGCAAGAAATGCAACGTGGCCAATCGGTTGAACTTAGTGATATATTTGGACCAGTGCGGGTAAGCACGTGTAGCAATAAAACACTCGAATGCACAGAAGAGTGTCGTGTTGTCGATCGTAATCGTCGACTCGATATAGCGCTTCAAATTCGAAATCCTGATGTATCGTCAAAACTTCAGCCAAAGTATTCCGATTATTTAAGATCGTGGGGCAAGAAGGATCCCAAATTTATTGAGAGTGTCCACGATAAACTAACCGAGTTGGTCAAATTGTCGAAGGATAGCAAACGAAAATCACGTAGCCATTCATTTCCAACGATGAATCGTGATAAACGGCAAGTGGTTCATGAAATGTGTTCGATGTTTGGCGTTGAATCGGTAGCATATGATGCAGAACCAAATCGTAATGTTGTGGCCACGGCTTATAAGGATCGGTCGTGGCTTCCAGCTATGAGTGTCCTTGAAGTTTTACAGCGAGAAGGTGGTCAACGACGAATACCTGTTCCGCAGAATGCGTGGGGTATAAAAAAATGA
Protein Sequence
MSQNYYGPYCDGAQFFNQFQNNVDAQYYYHVNGVPQYNYYGNEFPPPQQRVQVQHQNYQSQYVPPSTQYSFQIENSTLVPTAAEFVPSWLNKEGATNTNGTSLNSAQEDVSSTIDELSNLSLNSSNKNDRDHRVENNNQRSTGNRITYKDNRNDYRENDNYRNNHRPRYENNYNSRYNNYRYEDNSRYNNNRSRNTYKKDNSKPLHKSKSGIQSGVQSSSSAESVPDPKIEKLSQRDNLSHEIDSGKLECLVCCENIKPYQSIWSCSNCYHILHLNCTIKWAHSSKSDDGWRCPACQNVSQKIPRDYYCFCGKTKNPQNNYNDLAHSCGELCERKNGCEHSCTQLCHPGPCPPCQATVTRYCGCGKSSMLMQCNQKNDIVCEQICEKLLSCELHDCKLKCHQGDCEMCAEKFSFKCYCGKNTREVPCDIDNATMANYSCEALCNRMLSCQNHRCQQICHPGECGDCKLAPDTIKSCPCGKTRIVAGQRKSCLDPVPTCNRVCKKPLPCGPRRAPHLCTGKCHPGNCLACNKETAVKCRCGQMDQMVKCRELQTRADDARCKKRCTKKRNCGKHKCNQECCIDIDHICPIPCNHQLSCGKHKCDKPCHKGRCPPCYRSSFEELYCECGVNVIYPPVPCGTKRPECENPCTRQHPCDHPVQHNCHSAATCPPCMILTTKHCYGKHEQRKTIPCSQEDFSCGMPCNKPLPCNRHKCIRNCHKDDCTIEGEICKQNCTTIRTTCVHKCNAPCHDDDCPDTPCRETVEVSCQCGHRKQTRTCHDFAKDFRRIATANLASSMQEMQRGQSVELSDIFGPVRVSTCSNKTLECTEECRVVDRNRRLDIALQIRNPDVSSKLQPKYSDYLRSWGKKDPKFIESVHDKLTELVKLSKDSKRKSRSHSFPTMNRDKRQVVHEMCSMFGVESVAYDAEPNRNVVATAYKDRSWLPAMSVLEVLQREGGQRRIPVPQNAWGIKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01460819;
90% Identity
iTF_01459166;
80% Identity
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