Napp040094.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Nephrotoma appendiculata
Gene Symbol
stc
Assembly
GCA_947310385.1
Location
OX371224.1:136567222-136570195[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 1.8 7.4e+04 -4.0 1.6 15 19 290 294 289 294 0.81
2 15 0.083 3.4e+03 0.3 0.3 4 10 323 329 322 329 0.95
3 15 4e-07 0.016 17.3 17.3 3 19 336 352 335 352 0.93
4 15 1.9 7.9e+04 -4.1 1.8 6 10 378 382 378 382 0.97
5 15 2.5e-05 1 11.5 11.0 3 19 390 406 388 406 0.92
6 15 5.8e-07 0.024 16.8 12.4 1 19 446 464 446 464 0.93
7 15 0.3 1.2e+04 -1.5 0.9 5 10 494 499 494 499 0.96
8 15 0.00088 36 6.6 10.1 4 18 512 526 505 527 0.87
9 15 0.02 8.3e+02 2.3 11.3 1 11 567 577 567 589 0.91
10 15 7.2e-10 2.9e-05 26.1 15.3 1 18 594 611 594 612 0.97
11 15 1.1 4.7e+04 -3.3 1.2 6 10 641 645 640 645 0.85
12 15 2 8.1e+04 -8.6 10.9 10 18 659 668 648 669 0.72
13 15 0.00012 4.7 9.4 8.5 1 16 705 720 705 727 0.83
14 15 7.7e-08 0.0031 19.6 14.4 1 19 737 756 737 756 0.97
15 15 0.44 1.8e+04 -2.0 0.5 7 12 771 776 765 776 0.71

Sequence Information

Coding Sequence
ATGTCACAAAATTACTATGGACCTTATTGTGATGGAGCTCAGTTTTTTAGTCAGTTTCAAAATGTCGATGCGCAGTATTACTATCATGTTAACGGTGTGCCCCAGTACAACTACTACGGAAATGAGTTTGCGCCCCAACAGCAAAGGCTCCAACAAAACAATTACCAATCTCAGTATGTACCACCGTCGACGCAGTATAGTTTTCAAATTGAGAATTCTACATTGGTTCCGACCGCTGCTGAATTTGTGCCAAGCTGGCTGAATAAGGAGGGTGAAAATGCCTCGAACGGGACCAGCTCACATAATATTCAGGAAGATGTATCAAGTACAATAGATGATCTCTCAAATTTATCTTTGAGTTCGTCGAATAAAAATGAGAATCATCGGGTGGATAGTAACCAAAGAGGATCGGGACCTAGAAGGATATCATACAAAGATAGTCGAACTGATTACCGAGAAAATGATGGATATCGGAATAATCATCGCCCTCGCTACGATAATAACTATAACAACAGTCGATATAATAATTACCGTTACGAGGATAATTCTCGCCTCAACAATAATCGAGCAAGGAACAGTTATAAAAAAGATAATGGGAAGTCAATGTATAAATCAAAATCTGGGCTACAGTCGGGAGTTCAATCATCGTCTTCGGCCGAATCCGTACCCGATCCAAAAATTGAAAAGTTGTCGCAACGTGACAATTTGTCGCACGAAATCGATTCGGGCAAGCTCGAGTGTCTTGTGTGCTGTGAAAATATCAAGCCATATCAATACATATGGTCGTGCACCAATTGCTATCATATTCTTCATTTGAATTGTACCATAAAATGGGCTCATAGCTCAAAATCGGATGATGGATGGCGCTGTCCCGCGTGTCAAAATGTTTCACAAAAAATTCCTCGTGATTATTACTGTTTTTGTGGGAAGACGAAAAATCCCCAGAATAATTACAATGATTTGGCGCACAGTTGCGGCGAATTGTGTGAACGCAAAAATGGTTGTGAACATAGTTGTACTCAACTGTGCCATCCAGGGCCATGTCCACCTTGCCAGGCAACCGTAACACGTTATTGTGGATGTGGCAAATCGAGCAGGATTATGCAATGCAATCAAAAGAATGATATCGTTTGCGAACAGATTTGTGAGAAATTACTAAGCTGTGAGTTGCACGATTGTAAACTAAAATGCCATCAAGGTGATTGTGAAGTGTGCCCCGAAAAATTTACGTTCAAATGCTATTGTGGGAAAAATTCACGAGAAGTTCCATGCGACATTGATAATGCAAATATGGCCAACTATAGTTGCGAAAAGATGTGTAATCGAATGCTGCCGTGTCAAAATCATCGGTGTCAACAAATTTGTCATCTTGGCGAATGTGGCGATTGTAAATTGGCTCCAGACTCGATCAAATCATGTCCGTGTGGAAAAACTCGGATAGTAGCGGGGCAACGTAAGTCTTGCCTTGATCCAGTACTAACGTGTAATCGGGTTTGCAAAAAGCCACTTCCATGTGGTCCACGGCGTGCACCACATTTGTGCACAGGTAAATGTCATTCAGGGAATTGTTTAGCTTGCAACAAAGAAACTCCAGTTAAATGCCGTTGCGGTCAAATGGATCAGATGGTAAAATGTCGCGAGCTTCAAACACGTGCCGATGATGCACGATGTAAGAAGCGTTGCACTAAGAAACGGAATTGTGGGAAACACAAATGCAATCAAGAGTGTTGTATTGATATTGATCATATATGCCCGATCCCTTGTAATCACCAGCTATCATGTGGAAAACATAAATGCGATAAGCCATGTCATAAGGGACGATGTCCACCTTGTTATCGCAGCTCGTTCGAAGAGCTGTACTGTGAATGCGGTGTCAATGTTATATATCCTCCAGTGCCTTGCGGGACAAAACGACCAGAGTGTGAGAATCCGTGCACCAGGGAACATTCATGCGATCATCCCGTGCAACATAATTGTCATTCGGTTGCAACCTGCCCTCCTTGTATGATACTAACCACAAAATCCTGTTATGGGAAACATGAGCAGCGCAAAACTATTCCATGTAGCCAAGAAGATTTTAGTTGCGGAATGCCGTGCAATAGGGCGTTACCATGTAATCGTCACAAATGTATTCGAAGTTGTCACAAAGATGATTGTCCCATTGAGGGTGAAGTATGCAAACAGAATTGCACCACAATTCGTACAACGTGTGGCCATAAATGCAATGCACCTTGTCACGAAGGTGATTGTCCGGATACACCGTGCCGAGAAACTGTCGAAGTCACCTGCCAATGTGGAAATCGGAAACAAACTCGTACATGCCACGATTTTGCGAAAGATTTTCGGCGCATTGCCACTGCCAATCTAGCATCATCTATGCAGGAAATGCAACGTGGCCAATCGGTAGAGCTCAGCGATATATTTGGTCCAGTTCGAGTAAACACATCTAGTAACAAGACACTGGAATGTACTGAGGAGTGTCGTGTGGTCGATCGAAATCGTCGACTTGATATTGCACTACAGATTCGAAATCCAGATGTTTCGTCGAAACTCCAACCAAAGTATTCCGATTACTTAAGGTCGTGGGGCAAGAAGGATCCTAAATTTATCGAAACGGTGCACGATAAATTAACTGAATTGGTGAAATTATCGAAAGAGAGTAAACAAAAATCTCGTAGTCATTCGTTCCCAACCATGAATCGTGATAAGAGGCAAGTGGTACATGAAATGTGCAGTATGTTTGGTGTAGAATCCGTGGCTTATGATGCGGAACCAAATCGAAATGTTGTGGCCACGGCCTATAAGGATAGGTCGTGGCTGCCAGCTATGAGTCTCCTTGAAGTTTTACAACGGGAGGGTGGTCAACGACGAATACCCGTTCCGCAGAATGCGTGGGGTATAAAAAAATGA
Protein Sequence
MSQNYYGPYCDGAQFFSQFQNVDAQYYYHVNGVPQYNYYGNEFAPQQQRLQQNNYQSQYVPPSTQYSFQIENSTLVPTAAEFVPSWLNKEGENASNGTSSHNIQEDVSSTIDDLSNLSLSSSNKNENHRVDSNQRGSGPRRISYKDSRTDYRENDGYRNNHRPRYDNNYNNSRYNNYRYEDNSRLNNNRARNSYKKDNGKSMYKSKSGLQSGVQSSSSAESVPDPKIEKLSQRDNLSHEIDSGKLECLVCCENIKPYQYIWSCTNCYHILHLNCTIKWAHSSKSDDGWRCPACQNVSQKIPRDYYCFCGKTKNPQNNYNDLAHSCGELCERKNGCEHSCTQLCHPGPCPPCQATVTRYCGCGKSSRIMQCNQKNDIVCEQICEKLLSCELHDCKLKCHQGDCEVCPEKFTFKCYCGKNSREVPCDIDNANMANYSCEKMCNRMLPCQNHRCQQICHLGECGDCKLAPDSIKSCPCGKTRIVAGQRKSCLDPVLTCNRVCKKPLPCGPRRAPHLCTGKCHSGNCLACNKETPVKCRCGQMDQMVKCRELQTRADDARCKKRCTKKRNCGKHKCNQECCIDIDHICPIPCNHQLSCGKHKCDKPCHKGRCPPCYRSSFEELYCECGVNVIYPPVPCGTKRPECENPCTREHSCDHPVQHNCHSVATCPPCMILTTKSCYGKHEQRKTIPCSQEDFSCGMPCNRALPCNRHKCIRSCHKDDCPIEGEVCKQNCTTIRTTCGHKCNAPCHEGDCPDTPCRETVEVTCQCGNRKQTRTCHDFAKDFRRIATANLASSMQEMQRGQSVELSDIFGPVRVNTSSNKTLECTEECRVVDRNRRLDIALQIRNPDVSSKLQPKYSDYLRSWGKKDPKFIETVHDKLTELVKLSKESKQKSRSHSFPTMNRDKRQVVHEMCSMFGVESVAYDAEPNRNVVATAYKDRSWLPAMSLLEVLQREGGQRRIPVPQNAWGIKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01460819;
90% Identity
iTF_01459166;
80% Identity
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