Tlat008530.1
Basic Information
- Insect
- Tipula lateralis
- Gene Symbol
- sip1
- Assembly
- GCA_963932295.1
- Location
- OZ010736.1:116086093-116088668[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.8e-90 1.7e-85 288.0 15.7 3 275 380 644 378 644 0.98 2 2 0.47 9.2e+03 -3.0 0.1 245 265 659 679 648 688 0.55
Sequence Information
- Coding Sequence
- atgtctgATACAGAATATGAAAGATTTGAAATAACAAATCGAGATTTAGAATATGAATTTAATCCGACTCGTTATCGacgtaatttatcaaaaaatcaacaaatttatggtATTTGGGCATCAGACAGTGAAAATGAAGATATAGAAGAATATGATAAAAGAGGCCGTTTGAAACGCGACACAAAAAAGGCAAAAGATTATACTACACCGGTAAGTTTTGTGGCTGGGGGAGTCCAACAGTACGGTAAGAAAAAAGATGAAAATGCAATTAAAGTTGAAGATGAAGATGATGATACTAAAAGTCCCCAAGTTGTAAACGGATCATCCGAGTCTGAAGAGGAAGCGTATCGTCCACGTCCGTCGTTTGCACAGCAGCCGCAAAATAAACCAGTTGCGAAAGGTATAGGTCAATGGGAGAGTTATACAAAAGGAATTGGTGCAAAACTGTTACTTCAAATGGGTTACGAGCCTGGGAAGGGGCTGGGTAAAACTTTGCAAGGTATTGCCACTCCAGTCGAGGCGTCTGTACGCAAAGGCAGAGGAGCCATTGGTGCATATGGTCCCGAAAAGTTAGCAAAAGTTGAACAACAAAGTGAACTCGCTGGTGAAAAATCTACAATCGCCGTCGAAAAGTCTAAAAAATGGTTGAAAAACTCcgaaaaaaaccaaaaacggAAAAAACTTCGTTATTTCTATCGTAGcgtggaggaaattatcgaaaAAGGAGGCAAGAAAGACTCATTATTTTACGATTCTGGGAGTAATAAACTAGGTAATGTAACCGTGATTGATATGACTGGACCTGAAAAACGTGTATTAAGCGGATATCATGCACTCGGTCAAAGTAAAATAGGCGAGGAAACGTTATACGATCACACAATAACTAAAAAAAGTTCAAACTTTAAGCTTCCCGAACTAATGTATAATTTGAATCTGATTGTTGATTTATGCGAGCAAGACATAATAGCGATCGAAAAGAGTCGTAAATCTACAAGTGATCGAAAAATAAGCTGCACTCAAGAGAAAGAGAAACTAAAGCAAATTGTCGATTTGGAACGTGATCACATCAATACATTGGAAAATGCATTAGAATTGGTTGAAAATCTCGTAAATCCGAAAACTTTTTTGACTCTTTCAGACGcggaaaaaatttttataaatcttttaatCGATTTTCCTGAAGAGTATAAAGAATTTGGATTAGGCGATCTTGCACCAGGAATCGTAGCGCCGATGTTTGTAACTAGGTTTAAGGATTGGAAGCCACTCGAAGAGCCAGCTAAACACGTACCATTACTAAAACGTTGGAACACTGTGCTTAATCAGAATGTAGTGAGCCACCAGTCAAATCTATTTGATCCTTATTCAGCATTAGTGTGGTCTGGAATAATTCCAAGCATTAGGAACGCTACAAATGCATGGGATCCGAGGAATTATCAGCAAATGATCGCATTGCTAGACGCTTGGGCGCCCCTATTTCCATCCTGGATCCTCGATAATGTTTTAGAACAGATAATTCTACCGAAATTAACAGTATATGTTGTGAATTGGGATCCATTAACAGATACGATTCCCATACATATATGGATTCTACCGTGGAGTAAACTACTTGCACACAAAATGgataatgtatatacaattgTTCGCGAAAAATTTGGCAGTGCACTCAAAGCGTGGTTGCCTTCAGATCGATCAGCTCGAGCGATGCTTGTTCCATGGAGAGATGTCTTTGACGATGGCGATATGCAAagctttttaattaaacatataattCCTAAGCTTCAGTTATCACTTTCAGATCTTGTCATAAATCCACTACAACAAGATCTAGAATTATGGAATCAGGTCTGGGAATGGCATGAACTTATTCCAGCTGTACTTATGGCACAAATGCTAGAAAAATTCTTTTTCCCTAAATGGATTCAAACGCTTGTCATTTGGCTAAATCAAAATCCAAATTTGGATCAAGTATCACGTTGGTATACGGGTtggaaaaatttttttactgatGAAATTTTGCAGCAGACAAACGTTAAAGAGCAATTAAGAAGAGCACTTGAATTAATGCATCGTGCCACGGGTACAACGCCAACTGCAATTGAGACTCATACGCCAGTGGCTCCACCGCCACCAAAACTAATGGATCTTCAGATTCCGCCACCAACTATCGAATTTAAAGATTTGGTTTCGCAGCGGTGTTCAGACCAAGGTATTATATTTGTTCCGATGCCGGGTAGACGCGAAATGGGCAAACAGGTTTATCGCATTGGTAAATTATTTGGATACATTGATCGATCGGTTATTATGGTGAGCGATGGCAGTTTTAATAATTGGGCTCCAATTTCAATCACAAGTCTACTGGAAAGAGCGATTACTGGTTAA
- Protein Sequence
- MSDTEYERFEITNRDLEYEFNPTRYRRNLSKNQQIYGIWASDSENEDIEEYDKRGRLKRDTKKAKDYTTPVSFVAGGVQQYGKKKDENAIKVEDEDDDTKSPQVVNGSSESEEEAYRPRPSFAQQPQNKPVAKGIGQWESYTKGIGAKLLLQMGYEPGKGLGKTLQGIATPVEASVRKGRGAIGAYGPEKLAKVEQQSELAGEKSTIAVEKSKKWLKNSEKNQKRKKLRYFYRSVEEIIEKGGKKDSLFYDSGSNKLGNVTVIDMTGPEKRVLSGYHALGQSKIGEETLYDHTITKKSSNFKLPELMYNLNLIVDLCEQDIIAIEKSRKSTSDRKISCTQEKEKLKQIVDLERDHINTLENALELVENLVNPKTFLTLSDAEKIFINLLIDFPEEYKEFGLGDLAPGIVAPMFVTRFKDWKPLEEPAKHVPLLKRWNTVLNQNVVSHQSNLFDPYSALVWSGIIPSIRNATNAWDPRNYQQMIALLDAWAPLFPSWILDNVLEQIILPKLTVYVVNWDPLTDTIPIHIWILPWSKLLAHKMDNVYTIVREKFGSALKAWLPSDRSARAMLVPWRDVFDDGDMQSFLIKHIIPKLQLSLSDLVINPLQQDLELWNQVWEWHELIPAVLMAQMLEKFFFPKWIQTLVIWLNQNPNLDQVSRWYTGWKNFFTDEILQQTNVKEQLRRALELMHRATGTTPTAIETHTPVAPPPPKLMDLQIPPPTIEFKDLVSQRCSDQGIIFVPMPGRREMGKQVYRIGKLFGYIDRSVIMVSDGSFNNWAPISITSLLERAITG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01054332; iTF_01459691; iTF_01053166; iTF_01455762; iTF_01458386; iTF_01454840; iTF_01051934;
- 90% Identity
- iTF_01459691; iTF_01455762; iTF_01458386; iTF_01053166; iTF_01054332; iTF_01051934; iTF_01454840;
- 80% Identity
- -