Ngue004223.1
Basic Information
- Insect
- Nephrotoma guestfalica
- Gene Symbol
- sip1
- Assembly
- GCA_963691935.1
- Location
- OY829913.1:63015482-63017946[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-90 5.6e-86 290.4 15.6 4 275 386 649 383 649 0.98 2 2 0.54 1.2e+04 -2.6 0.1 245 267 664 686 654 693 0.61
Sequence Information
- Coding Sequence
- atgtctgATACCGAATACGAACGGTTCGAAATAACAAATCGAGATttagaatatgaatttaatCCAACCCGTTACCGGCGtaatttaacgaaaaatcaacaaatctatGGTATTTGGGCTTCAGACAGCGAGAACGATGATGTTGAAGAATATGATAAGCGTGGCCGCCTGAAACGGGACTCAAAGAAGGCAAAAGACTATACAAGTCCAGTTAGTTTTGTTGCTGGTGGAGTTCAACAATACGGTAAGAAAAAAGAGAAGGCCGAAGATAATAGAACCGATGAAGATGACGAGGAGAAAGATGATGAAACAAATAACCCTCAAGCTGAAAGCCAATCGTCTGAATCTGAAGAGGAAGCATATCGAGCTCGGCCTTCATTTTCTCAACAACCTCAAGCTAAACCAGCGGCTAAAGGCATAGGTCAATGGGAAAGTTACACGAGAGGTATTGGCGCAAAATTACTCCTACAAATGGGTTATGAACCTGGTAAGGGATTAGGCAAAACATTACAAGGTATTGCTACCCCGGTTGAGGCATCTGTGCGCAAAGGACGAGGAGCTATAGGCGCATATGGCCCCGAAAAATTAGCTAAAGTTGAACAATCTGTTGATCTCGCGGGGGAAAAGTCCGCTATCGCAGCTGAAAAGTCGAAAAAATGGCTGAAAAACtccgaaaaaaatcaaaagcgcAAGAAACTTCGTTACTTTTATCGTAGTGTcgaggaaattattgagaaaGGAGGCAAGAAAGATTCATTATTCTTCGATTCGGGCAGCAGCAAACTGGGTAATGTTACTGTAATTGATATGACTGGGCCCGAAAAGCGTGTGTTGAGCGGATATCATGCGCTCGGCCAAAGCAAAATAGGCGAAGAAACACTCTACGAACATGCAATTACCAAGAAGAGTTCTAATTTTAAGCTCCCTGAACTAATGTACAACTTAAATTTGATTGTTGACTTATGTGAACAAGACATAGTCGCAATCGAGAAAAGTCGCAAATCAACAAAAgagcgaaaaattaattgtacCCAGGAGACTGAAAAGCTAAAACAGATTGTTGAATTGGAACGAGATCACATTAATACACTGGAGAATGCGTTAGAGTTAGTCGAAAATCTCGTAAATCCGAAAACGTTTTTAACTCTAGCGGATGcggagaaaatttttattaatcttttaatAGATTTCCCTGAAGAATACAAAGAGTTTGGGCTGGGTGACCTTGCGCCCGGAATTGTAGCACCGATGTTTGCCAGCCGCCTAAAGGATTGGAATCCACTCGAAGAACCGGCTAAGCACGTGCCACTACTAAAACGCTGGAACACGGTGCTAAATCAAAATGTTGCAACCCACCAGGCAAACCTTTTCGATCCTTACTCTGCCCTAGTCTGGTCCGGGATTATACCGAGCATTCGAAATGCCACAAATGTATGGGACCCGCGGAATTATCAACAAATGATTGCTTTGCTAGACGCATGGGCGCCTTTATTTCCATCATGGATTCTCGACAATATCTTAGAACAAATAATATTGCCGAAATTGACCGTGTACGTGGTGAATTGGGATCCATTGACCGATACGATTCCAATACATGTTTGGATTTTACCCTGGAGCAAACTACTCGCACATAAGATGGATAATGTTTATACGATTGTTCGTGAAAAATATGGCAATGCTCTGAAAGCGTGGATGCCTTCTGATCGTTCTGCGCGTGCAATGTTGTCTCCATGGAAAGACGTGTTCGATGACGGTGACATGCAGAGCTTTTTAATCAAACATATAATACCAAAGCTCCAGCTAAGCCTCTCGGACCTCGTTATCAACCCGTTGCAGCAAGATCTTGAATTCTGGAATCAGGTATGGGAATGGCATGAACTTATACCGGCGGTGCTTATGGTACAAATGTTAGAGAAATACTTTTTCCCTAAATGGATTCAAACACTGGTCATTTGGCTGaatcaaaatccaaatttggatcaagtttcgCGTTGGTATACGGGATGGAAAAACTTTTTAACCGATGAAGTACTCCAGCAGACGAATGTTAAGGAACAATTACGACGAGCACTCGAATTGATGCATCGTGCAACAGGCACAACACCAACAGCAATCGAGACTCAACCAGTGCCGCCGGCACCACCACCACCTAAACTAATGGACCTTCAAATTCCCCCACCAACCATCGAATTTAAAGATTTGGTTTCACAACGATGTTCAGATCAGGGCATTATATTTGTTCCCATGCCAGGAAGGCGAGAGATGGGCAAACAGGTTTATCGTATTGGGAAATTATTCGGGTATATCGATCGGTCGGTAATTTTGGTGAGCGATGGTAGTTTTAATAATTGGGCTCCCATCTCAATCACAAGCCTTTTGGAACGGGCGATAACTGGCTAA
- Protein Sequence
- MSDTEYERFEITNRDLEYEFNPTRYRRNLTKNQQIYGIWASDSENDDVEEYDKRGRLKRDSKKAKDYTSPVSFVAGGVQQYGKKKEKAEDNRTDEDDEEKDDETNNPQAESQSSESEEEAYRARPSFSQQPQAKPAAKGIGQWESYTRGIGAKLLLQMGYEPGKGLGKTLQGIATPVEASVRKGRGAIGAYGPEKLAKVEQSVDLAGEKSAIAAEKSKKWLKNSEKNQKRKKLRYFYRSVEEIIEKGGKKDSLFFDSGSSKLGNVTVIDMTGPEKRVLSGYHALGQSKIGEETLYEHAITKKSSNFKLPELMYNLNLIVDLCEQDIVAIEKSRKSTKERKINCTQETEKLKQIVELERDHINTLENALELVENLVNPKTFLTLADAEKIFINLLIDFPEEYKEFGLGDLAPGIVAPMFASRLKDWNPLEEPAKHVPLLKRWNTVLNQNVATHQANLFDPYSALVWSGIIPSIRNATNVWDPRNYQQMIALLDAWAPLFPSWILDNILEQIILPKLTVYVVNWDPLTDTIPIHVWILPWSKLLAHKMDNVYTIVREKYGNALKAWMPSDRSARAMLSPWKDVFDDGDMQSFLIKHIIPKLQLSLSDLVINPLQQDLEFWNQVWEWHELIPAVLMVQMLEKYFFPKWIQTLVIWLNQNPNLDQVSRWYTGWKNFLTDEVLQQTNVKEQLRRALELMHRATGTTPTAIETQPVPPAPPPPKLMDLQIPPPTIEFKDLVSQRCSDQGIIFVPMPGRREMGKQVYRIGKLFGYIDRSVILVSDGSFNNWAPISITSLLERAITG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01457341;
- 90% Identity
- iTF_01457341;
- 80% Identity
- -