Nfla058139.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Nephrotoma flavescens
Gene Symbol
sip1
Assembly
GCA_932525705.1
Location
CAKOBH010006862.1:509107-511480[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.4e-90 7.4e-86 289.9 16.0 4 275 386 649 383 649 0.98
2 2 0.33 1e+04 -2.4 0.1 245 268 664 687 654 694 0.61

Sequence Information

Coding Sequence
ATGTCTGATACCGAATACGAACGGTTCGAAATAACAAATCGAGATTTGGAATATGAATTTAATCCAAGTCGCTATCGGCGTAATTTATCGAAAAATCAACAAATCTATGGTATATGGGCTTCAGACAGTGAGAACGATGATGTTGAAGAATATGATAAGCGTGGCCGCCTGAAACGGGACTCGAAGAAACCAAAAGACTATACAAGTCCAGTTAGTTTTGTTGCTGGTGGAGTTCAACAATACGGTAAGAAAAAAGAGAAGAACGAAGATAATAGAACCGATGAAGATGACGAGGAGGAAGATGATGAAACAAATAATCCTCAAGCTGAAAGTCAATCGTCTGAATCTGAAGAGGAAGCATATCGAGCCCGGCCCACATTTTCTCAACAACCGCAACCTAAACCAGCGGCTAAAGGCATTGGTCAATGGGAAAGTTACACGAGAGGTATTGGTGCAAAATTACTCCTACAAATGGGTTATGAACCTGGTAAGGGGTTAGGCAAAACATTGCAAGGTATTGCTACCCCGGTTGAGGCGTCTGTGCGCAAAGGACGAGGAGCTATAGGCGCATACGGCCCCGAAAAACTAGCTAAAGTCGAACAACCTGGTGAACTCGCAGGGGAAAAGTCGGCTATCACAGCTGAAAAGTCGAAAAAATGGTTGAAAAACTCCGAAAAAAATCAAAAGCGCAAGAAACTTCGGTACTTTTATCGTAGTGTCGAGGAAATTATTGAAAAAGGAGGCAAGAAAGATTCATTGTTCTTCGATTCGGGCAGCAGTAAACTGGGTAATGTTACTGTAATTGACATGACTGGACCCGAAAAGCGTGTGTTGAGCGGATATCATGCGCTCGGCCAAAGCAAAATAGGCGAAGAAACACTCTACGAACATGCAACTACCAAGAAGAGTTCTAATTTTAAGCTCCCTGAACTAATGTACAACTTAAATTTAATTGTTGACTTATGTGAACAAGACATAATCGCAATTGAGAAAAGTCGTAAATCAACAAAAGAGCGAAAACTTAATTGTACCCAGGAGACTGAAAAGCTGAAACAGATTGTTGAATTGGAACGGGATCACATTAATACACTGGAGAATGCGTTAGAGTTAGTCGAAAATCTCGTAAATCCGAAAACGTTTTTAACTCTCGCGGATGCGGAGAAACTTTTTATTAATCTTTTAATAGATTTCCCTGAAGAATACAAAGAGTTTGGGCTGGGTGATCTTGCGCCCGGAATTGTAGCACCGATGTTTGCCAGCCGCCTAAAGGATTGGAATCCACTCGAAGAACCGGCTAAGCACGTGCCACTACTAAAACGCTGGAACACGGTGCTAAATCAAAATGTTGCAACCCACCAGGCAAACCTTTTCGATCCTTACTCTGCCCTAGTCTGGTCCGGGATTATACCGAGCATTCGAAATGCCACAAATGTATGGGACCCGCGGAACTATCAACAAATGATTGCTTTGCTAGACGCATGGGCGCCTTTATTTCCATCATGGATTCTTGACAATATCTTAGAACAAATAATATTGCCGAAATTGACCGTGTACGTGGTGAATTGGGATCCATTGACCGATACGATTCCAATACATGTTTGGATTTTACCCTGGAGCAAACTACTCGCACATAAAATGGATAATGTTTATACGATTGTTCGCGAAAAATATGGCAATGCTCTGAAAGCGTGGATGCCTTCTGATCGATCCGCGCGTGCAATGCTGTCTCCATGGAAAGACGTGTTCGATGACGGTGACATGCAAAGCTTTTTAATCAAGCACATAATACCAAAGCTTCAGCTAAGCCTCTCGGATCTCGTTATCAACCCGTTGCAGCAAGATCTCGAACTCTGGAATCAGGTATGGGAATGGCATGAACTTATACCGGCGGTTCTTATGGTACAAATGTTAGAGAAATACTTTTTCCCTAAATGGATTCAAACACTGGTCATTTGGTTGAATCAAAATCCAAATTTGGATCAAGTGTCACGTTGGTATACGGGATGGAAAAACTTTTTAACCGATGAAGTACTCCAGCAGACGAATGTTAAGGAACAATTACGACGAGCACTCGAATTGATGCATCGTGCAACAGGTACAACACCAACGGCAGTCGAGACTCAACCGGTGCCGCCGGCACCACCGCCACCTAAACTAATGGACCTCCAAATTCCCCCACCAACGATCGAATTTAAAGATTTGGTTTCACAACGATGTTCGGACCAGGGTATTATATTTGTTCCCATGCCAGGAAGGCGAGAGATGGGTAAACAGGTTTATCGTATTGGGAAATTATTCGGGTATATC
Protein Sequence
MSDTEYERFEITNRDLEYEFNPSRYRRNLSKNQQIYGIWASDSENDDVEEYDKRGRLKRDSKKPKDYTSPVSFVAGGVQQYGKKKEKNEDNRTDEDDEEEDDETNNPQAESQSSESEEEAYRARPTFSQQPQPKPAAKGIGQWESYTRGIGAKLLLQMGYEPGKGLGKTLQGIATPVEASVRKGRGAIGAYGPEKLAKVEQPGELAGEKSAITAEKSKKWLKNSEKNQKRKKLRYFYRSVEEIIEKGGKKDSLFFDSGSSKLGNVTVIDMTGPEKRVLSGYHALGQSKIGEETLYEHATTKKSSNFKLPELMYNLNLIVDLCEQDIIAIEKSRKSTKERKLNCTQETEKLKQIVELERDHINTLENALELVENLVNPKTFLTLADAEKLFINLLIDFPEEYKEFGLGDLAPGIVAPMFASRLKDWNPLEEPAKHVPLLKRWNTVLNQNVATHQANLFDPYSALVWSGIIPSIRNATNVWDPRNYQQMIALLDAWAPLFPSWILDNILEQIILPKLTVYVVNWDPLTDTIPIHVWILPWSKLLAHKMDNVYTIVREKYGNALKAWMPSDRSARAMLSPWKDVFDDGDMQSFLIKHIIPKLQLSLSDLVINPLQQDLELWNQVWEWHELIPAVLMVQMLEKYFFPKWIQTLVIWLNQNPNLDQVSRWYTGWKNFLTDEVLQQTNVKEQLRRALELMHRATGTTPTAVETQPVPPAPPPPKLMDLQIPPPTIEFKDLVSQRCSDQGIIFVPMPGRREMGKQVYRIGKLFGYI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01457341;
90% Identity
iTF_01457341;
80% Identity
-