Basic Information

Insect: Timema monikensis
Gene Symbol: stc
Assembly: GCA_902151445.1
Location: CABFVZ010000645.1:231765-260486[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 2 8.1e+04 -4.2 1.6 15 19 401 405 400 405 0.81

2 15 0.071 2.9e+03 0.5 0.3 4 10 434 440 433 442 0.94

3 15 2.3e-07 0.0093 18.1 13.5 4 18 451 465 449 466 0.94

4 15 1.7e-06 0.07 15.3 11.8 1 18 502 519 502 520 0.96

5 15 1.2 4.8e+04 -3.4 1.1 8 13 525 530 524 531 0.76

6 15 4.4e-08 0.0018 20.4 14.0 1 18 560 577 560 578 0.97

7 15 9.2e-06 0.37 12.9 15.3 4 19 627 642 620 642 0.87

8 15 1.4 5.7e+04 -3.6 2.0 5 10 671 676 671 676 0.93

9 15 0.00055 22 7.3 8.1 1 11 682 692 682 693 0.97

10 15 2 8.1e+04 -4.3 0.7 4 10 697 703 697 703 0.82

11 15 1.4e-08 0.00057 22.0 16.1 1 19 709 727 709 727 0.98

12 15 1.2 4.9e+04 -3.4 0.7 6 10 756 760 755 761 0.79

13 15 2 8.1e+04 -5.7 3.7 10 12 774 776 771 784 0.50

14 15 1.4e-07 0.0055 18.8 11.0 1 15 820 834 820 845 0.91

15 15 9.3e-07 0.038 16.1 13.2 1 19 852 871 852 871 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	2	8.1e+04	-4.2	1.6	15	19	401	405	400	405	0.81
2	15	0.071	2.9e+03	0.5	0.3	4	10	434	440	433	442	0.94
3	15	2.3e-07	0.0093	18.1	13.5	4	18	451	465	449	466	0.94
4	15	1.7e-06	0.07	15.3	11.8	1	18	502	519	502	520	0.96
5	15	1.2	4.8e+04	-3.4	1.1	8	13	525	530	524	531	0.76
6	15	4.4e-08	0.0018	20.4	14.0	1	18	560	577	560	578	0.97
7	15	9.2e-06	0.37	12.9	15.3	4	19	627	642	620	642	0.87
8	15	1.4	5.7e+04	-3.6	2.0	5	10	671	676	671	676	0.93
9	15	0.00055	22	7.3	8.1	1	11	682	692	682	693	0.97
10	15	2	8.1e+04	-4.3	0.7	4	10	697	703	697	703	0.82
11	15	1.4e-08	0.00057	22.0	16.1	1	19	709	727	709	727	0.98
12	15	1.2	4.9e+04	-3.4	0.7	6	10	756	760	755	761	0.79
13	15	2	8.1e+04	-5.7	3.7	10	12	774	776	771	784	0.50
14	15	1.4e-07	0.0055	18.8	11.0	1	15	820	834	820	845	0.91
15	15	9.3e-07	0.038	16.1	13.2	1	19	852	871	852	871	0.95

Sequence Information

Coding Sequence: ATGGCAAACTGGAATAGGCCAAATTCATATGATAATGGAAGAAACCCAAACTACAACTTTCAATCAAGCGAATATTCCAGACGAAATCCACAACAGTATGGAGGGGAGTCTACAACTCTACCTTATTACTCTGCCCCAAACGAAGTGGGTGTGTCTACCTCCGTAGAGAATACTACTTTGTATGACACTTCAAGAGCACCTGTTTTAACTGCACCAACAAATTATATGGATGCACATCAGTTGTTTCCATATTTTAACGATACAGCTGACGTAAGGGCTAATCTTCCTCAAAGGGAAGCAAATTTTGCTCTTGCAGCTTCATCATCTTTGACTGCAACAGCTGGAGAGTTTATACCGAGATCGACATCTGCGCTGCACTCAAGTTCTCGAAATGTTATGAAAAATTCTGTTTTACATGGCGGCCAAGATCAACAGCAAACAAGACAACCTGACCAAGACTGGAGAAACAACCAGGTCTACAAAAATTCATTTACAGGTTATAATCGCGGCCAGGGTAACTTCGCAAGGGATGATCGGAACTCATCACAACCTAGGAGAACTAATATGGATGATTCAAAGAGTCAAGATCGTAGCAGATTATTGGCTGAAGCGGCAGCGTTTCTTATACCCAAACCCAACCAGGCCATGCCCGGATCTAGTGTTTCTAATGAAAATGCCGGGTCCGTTGATACCAAGTCTCAAAATGATGCCGGAGCTACAAACCCTATGGCGAGAAGGAATTTTGACTCCCAACAAAGATctggagaaaataataaaagaatctATACAAACcctaaatatcaaaacaatacaACTTATGGTAACTATCCAAAATCTGAAAACTTCTATCAGAATCCTAGAAGAAACACTAATATTTCTGGCTACACGAAGCAAGCACAGTATTACTCCCAGCACGGAAATGATCCAAGAGATAGAATGCCATTAACTCTAGAAACGTTTGGGGCATCTCAGAGCTATGGTAGAAATCATCGTACTTCACATAGCAACTCTGATGACGAGGCAAGTCAGAGGGAGCGCCTTGTTGAGCAGTTGACTAAAGGCACACTGGAATGCTTGGTATGCTGTGACCGAGTTCGCCAACAAGATCCTGTGTGGAGCTGCAGGAATTGCTACCACGTGTTGCACCTTAAGTGCATCAAGAAGTGGGCCAAGTCTTCCAAAGTTGAAACTGGATGGCGCTGCCCTGCCTGTCAGAATGTCACAGAGAAGGTCCCACAGCTGTATCGCTGTTTCTGCAGCAAGGCGATTGAGCCCCAGTGGAATAGACAAGATGTCCCACACACTTGTGGCGAGATGTGTGGCAAGACTCGTGACAAACCAGATTGTGTACATCGTTGCACTCTTCTCTGCCATCCGGGACCATGCCCCCCTTGTGTTGCTCAAGTAAACAGACAATGCGGCTGTGGTGCAACATCAAAAGTGGTGAAGTGTGGTGGAGACAAGCCACTACTTTGTGACGCTCTGTGTGGCAAGGAGCTAAACTGTAGTGTACACAAGTGCACCAGGAAATGCCACATGGGAGAATGTGGCAATTGTGAAGAAATTGTCAGCCAAGCTTGCCATTGTGGCAAAGAGTCTCGGAAGATTGCCTGCGACCTCACTTCAGTCGGGGTGACAAACTTCTCCTGTGGAGGAATTTGTGAGAAGAATCTGACATGCGGGAACCACCAGTGCACTTTGGTGTGTCACACTGGCCCCTGTGGAGATTGCGAGCTCTCCCCCGATAAGGTCACACACTGTCCTTGCGGTAAAACTGAGCTTACAGCAGACCAGGCCAGAAACAGCTGTCTGGATACCATTCCCAACTGTCCGCTCATCTGTGGCAAGAAGCTAGCTTGCGGTCAACCCAACAACCCCCACCAATGCAAAGAGAAGTGTCACAATGGCAAATGCCCTTCTTGCCCATTAAGTACGCTTGTGAAGTGTCGCTGCGGCAATATGGACAGAGAAATCCCATGTATTGAGCTCACCACACGAGCTGATGATGCCAGGTGTGAGAAAAAATGCACCAAGAAACGTGCATGTGGCAAACATCGTTGTAACCAGCTGTGCTGCATTGACGTTGATCATGTATGCCCCATGGTGTGCAACCACATGTTGACCTGCGGGCAGCACCGCTGTGATGAACCTTGCCACCGCGGACATTGCCGCCCCTGTTGGAGAACAAGTTTTGACGAGCTTTATTGTGAGTGTGGGGCAAGCGTGTTATACCCTCCGGTCCCCTGCGGCACAAGGCGTCCATCGTGCTCCAAGCCTTGCTCCAGACCCCACCCTTGTGAGCACCCACCGATCCACAACTGCCACAGCGAGCCGACTTGTCCACTGTGTACAGTGCTCACCCAGAAGTACTGCTATGGCAAGCATGAGCTTCGCAAGACCATTCCATGCCACCAGGCGGATTTCTCGTGCGGTCTCCCGTGCAACAAGGACTTGTCTTGTGGCCGCCACCGCTGCATCTTGCCATGTCACAAGGGCCCCTGTCTGAAAGAAGGTCAGGCGTGTGCACAACCTTGCGCCACCACAAGGAATCTCTGTGGACATAACTGTGCCAGTCCTTGCCACGATGGACCATGCCTCGACTCACCTTGCAAGGAAATGGTAAAGGTGACATGCGAGTGCGGCCACAGATTCACTACTCGAGCCTGCTTTGACAATGTGAAGGAGTACCAGCGTATGGCTACATCACTGTTGGCTTCCAAGATGGCGGACATGCAGTTAGGACATTCTGTTGACATTGGTGACCTGCTTAGTAATCCAACCACTCGCAAAATGAGCCTTAAAACgcttGAGTGCAATGATGAGTGCAAATTGATTGAAAGAAATAGACGTATGGCTATAGGGCTGCAGATTCGTAATCCTGATCTAAGCGCCAAATTGACGCCTCGTTATTCAGAGTTTATGCGACAGTGGGCAAAGAAAGACCCTAATTTATGTAACATGGTTCAAGAGAAGTTAACAGAACTAGTTCAGTTAGCCAAACAGtcgAAGCAAAAGAGTCGCAGCCACTCTTTTGATCCGATGAACCGAGACAAACGTCAGTTTGTTCATGAGTACTGTGAACATTTTGGATGTGAGTCCATTGCGTATGATCAGGAGCCCAAACGTAATGTCGTAGCGATAGCTACAAGAGATAAGGCTTGGCTTCCTAGCATGAGTTTGATGGAAGTTATTCAGCGAGAAAATGGTCAGCGGAAGATCCCAAAACCTGTTATTAATGCAAACAGAACCCCATCCCTCAGAACTATGGATGTATTACCTGTGAAATATTCTCAAGCGCACGCCATAAAGGCCCCTAGCCAAAACACACTTCAGCAAACAAAAGAAGAGCCTgatattgattattttgattttacacAGAAATAA
Protein Sequence: MANWNRPNSYDNGRNPNYNFQSSEYSRRNPQQYGGESTTLPYYSAPNEVGVSTSVENTTLYDTSRAPVLTAPTNYMDAHQLFPYFNDTADVRANLPQREANFALAASSSLTATAGEFIPRSTSALHSSSRNVMKNSVLHGGQDQQQTRQPDQDWRNNQVYKNSFTGYNRGQGNFARDDRNSSQPRRTNMDDSKSQDRSRLLAEAAAFLIPKPNQAMPGSSVSNENAGSVDTKSQNDAGATNPMARRNFDSQQRSGENNKRIYTNPKYQNNTTYGNYPKSENFYQNPRRNTNISGYTKQAQYYSQHGNDPRDRMPLTLETFGASQSYGRNHRTSHSNSDDEASQRERLVEQLTKGTLECLVCCDRVRQQDPVWSCRNCYHVLHLKCIKKWAKSSKVETGWRCPACQNVTEKVPQLYRCFCSKAIEPQWNRQDVPHTCGEMCGKTRDKPDCVHRCTLLCHPGPCPPCVAQVNRQCGCGATSKVVKCGGDKPLLCDALCGKELNCSVHKCTRKCHMGECGNCEEIVSQACHCGKESRKIACDLTSVGVTNFSCGGICEKNLTCGNHQCTLVCHTGPCGDCELSPDKVTHCPCGKTELTADQARNSCLDTIPNCPLICGKKLACGQPNNPHQCKEKCHNGKCPSCPLSTLVKCRCGNMDREIPCIELTTRADDARCEKKCTKKRACGKHRCNQLCCIDVDHVCPMVCNHMLTCGQHRCDEPCHRGHCRPCWRTSFDELYCECGASVLYPPVPCGTRRPSCSKPCSRPHPCEHPPIHNCHSEPTCPLCTVLTQKYCYGKHELRKTIPCHQADFSCGLPCNKDLSCGRHRCILPCHKGPCLKEGQACAQPCATTRNLCGHNCASPCHDGPCLDSPCKEMVKVTCECGHRFTTRACFDNVKEYQRMATSLLASKMADMQLGHSVDIGDLLSNPTTRKMSLKTLECNDECKLIERNRRMAIGLQIRNPDLSAKLTPRYSEFMRQWAKKDPNLCNMVQEKLTELVQLAKQSKQKSRSHSFDPMNRDKRQFVHEYCEHFGCESIAYDQEPKRNVVAIATRDKAWLPSMSLMEVIQRENGQRKIPKPVINANRTPSLRTMDVLPVKYSQAHAIKAPSQNTLQQTKEEPDIDYFDFTQK*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01446183; iTF_01451150; iTF_01448120; iTF_01445340; iTF_01450144;
90% Identity: iTF_01446183; iTF_01448120; iTF_01445340; iTF_01450144; iTF_01451150;
80% Identity: -