Basic Information

Insect: Timema shepardi
Gene Symbol: stc
Assembly: GCA_902151425.1
Location: CABFVX010004097.1:16161-48001[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 2 1e+05 -4.2 1.6 15 19 428 432 427 432 0.81

2 15 0.071 3.6e+03 0.5 0.3 4 10 461 467 460 469 0.94

3 15 2.3e-07 0.012 18.1 13.5 4 18 478 492 476 493 0.94

4 15 1.2e-06 0.059 15.8 11.0 1 18 529 546 529 547 0.96

5 15 1.2 6e+04 -3.4 1.1 8 13 552 557 551 558 0.76

6 15 5.6e-09 0.00029 23.2 13.9 1 18 587 604 587 605 0.97

7 15 1.8e-05 0.91 12.0 15.6 4 19 700 715 699 715 0.97

8 15 1.4 7.2e+04 -3.6 2.0 5 10 744 749 744 749 0.93

9 15 0.00055 28 7.3 8.1 1 11 755 765 755 766 0.97

10 15 2 1e+05 -4.3 0.7 4 10 770 776 770 776 0.82

11 15 1.4e-08 0.00071 22.0 16.1 1 19 782 800 782 800 0.98

12 15 1.2 6.1e+04 -3.4 0.7 6 10 829 833 828 834 0.79

13 15 2 1e+05 -5.7 3.7 10 12 847 849 844 857 0.50

14 15 9.3e-06 0.47 12.9 14.7 1 16 893 908 893 919 0.87

15 15 9.3e-07 0.047 16.1 13.2 1 19 925 944 925 944 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	2	1e+05	-4.2	1.6	15	19	428	432	427	432	0.81
2	15	0.071	3.6e+03	0.5	0.3	4	10	461	467	460	469	0.94
3	15	2.3e-07	0.012	18.1	13.5	4	18	478	492	476	493	0.94
4	15	1.2e-06	0.059	15.8	11.0	1	18	529	546	529	547	0.96
5	15	1.2	6e+04	-3.4	1.1	8	13	552	557	551	558	0.76
6	15	5.6e-09	0.00029	23.2	13.9	1	18	587	604	587	605	0.97
7	15	1.8e-05	0.91	12.0	15.6	4	19	700	715	699	715	0.97
8	15	1.4	7.2e+04	-3.6	2.0	5	10	744	749	744	749	0.93
9	15	0.00055	28	7.3	8.1	1	11	755	765	755	766	0.97
10	15	2	1e+05	-4.3	0.7	4	10	770	776	770	776	0.82
11	15	1.4e-08	0.00071	22.0	16.1	1	19	782	800	782	800	0.98
12	15	1.2	6.1e+04	-3.4	0.7	6	10	829	833	828	834	0.79
13	15	2	1e+05	-5.7	3.7	10	12	847	849	844	857	0.50
14	15	9.3e-06	0.47	12.9	14.7	1	16	893	908	893	919	0.87
15	15	9.3e-07	0.047	16.1	13.2	1	19	925	944	925	944	0.95

Sequence Information

Coding Sequence: ATGGCAAACTGGAATAGGCCAAATTCATATGATAGTGGAAGAAACCCAAACTACAACTTCCAATCAAGCGAATATTCCAGACGAAATCCACAACAGTATGGAGGGGGGTCTACAACTCTACCTTATTACTCTGCTCCAAACGAAGTGGGTGTGTCTACCTCCGTACAGAATACTACTTTGTATGAAACTTCAGGAGCACCCGTTTTTAACGCACCTACAAATTATATAGATGCACATCAGTCGTTTCCATATTTTAACGATACAGCTGACGTAAGTGCTAATCTTCCTCAAAGGGAAGCAAATCTTGCTCTTGCAGCCTCATCATCTTTGACTGCAACAGCTGGAGAGTTTATACCAAGATCGACATCTGCACTGCACTCAAGTTCTCGAAATGTTATGAAAAATTCTGTTTTACATGGCGGCCAAGATCAGCAGCAATCAAGACAGCCTGACCAAGACTGGAGAAACAACCGGGTGTACAAAAATTCATTTACGGGCTATAATCGAGGCCAGGGTAACTTTGCAAGGGATGATCGAAACTCATCACAACCTAGGAGAACTAATATGGAAGATGCAAAGAGTCAAGATCGTAGCAGATTATTGGCTGAAGCTGCAGCGTTTCTTATACCCAAACCCAACCAGGTCATGCCTGGATCTAGTGTATTTAATGAAAACGCCGGGTCCGTTGATACCAAGTCTCAAAATGATGCCGGAGCTACAAACCCTATGACGAGAAGGAATTTCGACTCCCAACAAAGAtcaggagaaaataataaaagaatttaTACAAACCctaaatatcaaaacaatacAACTTATGGTAACTATACTAAATCTGAAAACTTCTATCAGAATCCTAGAAGAAACACTAATACTTCTGGCTACACGAAGCAACCACAGTATTACTCTCAGCAAGGAAATGATCCAAGAGATAGAATGCCATTAACTCTAGAAACGTTTGGGGCATCTCAGAGCTATGGTAGAAATCATCGTACTTCACATAGCAACTCTGGCGGGGAacctttcaaaaataaagaaattttagTGAACCAATCAGCTCTGAAAAGAGGAGCATTTCATATAGAAAATAATGATGACGAGGCAAGTCAGAGGGAGCGCCTTGTTGAGCAGTTGACTAAAGGCACACTGGAATGCTTGGTATGCTGTGACCGAGTTCGCCAACAAGATCCTGTGTGGAGCTGCAGGAATTGCTACCACGTGTTGCACCTTAAGTGCATCAAGAAGTGGGCCAAGTCTTCCAAAGTTGAAACTGGATGGCGCTGCCCTGCCTGTCAGAATGTCACAGAGAAGGTCCCACAGCTGTATCACTGTTTCTGCAGCAAGGCGATTGAGCCCCAGTGGAATAGACAAGATGTCCCACACACTTGTGGTGAGATGTGTGGCAAGACTCGTGACAAACCGGATTGTGTGCACCGTTGCACTCTTCTCTGCCATCCGGGACCATGCCCCCCTTGTGTTGCTCAAGTAAACAGACAATGCGGCTGTGGTGCAACATCAAAAGTGGTGAAGTGTGGTGGAGACAAGCCACTACTTTGCGACGCTCTGTGTGGCAAGGAGCTAAACTGTAGTGTGCACAAGTGCGCCAGGAAATGCCACATGGGAGAGTGTGGCAATTGTGAAGAAATTGTCAGCCAAGCATGCCATTGTGGCAAAGAGTCTCGGAAGATTCCCTGCGACCTCACCTCAGTAGGGGTGACAAACTTCTCCTGTGGAGGAATTTGTGAGAAGAATCTGACATGCGGGAACCACCGGTGCACTTTGGTGTGTCACACTGGCCCCTGTGGAGAGTGCGAGCTCTCCCCTGATAAGATCACACACTGCCCTTGCGGTAAAACCGAGCTTACAGCAGACCAGGCCAGAAACAGCTGTCTAGATACCATTCCCAACTGTCCGCTCATCTGTGGCAAGAAGCTAGCTTGCGGTCAACCCAGCGGGAGACAGGAAGGAGGGTTTGGCAAGTTACCGCAGTTAACTGGGCGAGAGGCAGGAAGGAGGGTTCAGCGAGTTACCGCAGTGAACCAGGCGAGAGGCAGGAAAGAGAGTTCGGTGAGTTACCGCAATGAACCAGACAACCCCCACCATTGCGAAGAGAAGTGTCACAATGGCAAATGCCCTTCATGCCCATTAAGTACGCTTGTGAAGTGTCGCTGCGGCAATATGGACAGAGAAATCCCGTGTATTGAGCTCACCACACGAGCCGATGATGCCAGGTGTGAGAAAAAATGCACCAAGAAACGTGCATGTGGCAAACATCGTTGTAACCAGCTGTGCTGCATTGACGTTGATCACGTATGCCCCATGGTGTGCAACCACATGTTGACCTGCGGGCAGCACCGCTGTGATGAGCCTTGCCACCGCGGACATTGCCGCCCCTGTTGGAGAACAAGTTTTGACGAGCTGTACTGTGAGTGCGGGGCAAGCGTGCTGTACCCTCCAGTTCCCTGTGGCACAAGGCGCCCATCGTGCTCCAAGCCCTGCTCCAGACCCCACCCTTGTGAGCACCCACCGATCCACAACTGCCACAGCGAGCCGACTTGTCCACTGTGTACAGTACTCACCCAGAAGTACTGCTATGGCAAGCATGAGCTTCGCAAGACCATTCCATGCCACCAGGCGGATTTCTCGTGCGGCCTCCCGTGCAACAAGGACTTGCCTTGTGGCCGCCACCACTGCATCTTGCCATGTCACAAGGGCCCCTGTCTGAAAGAAGGCCAGGCATGTACACAGCCTTGCACCACCACAAGGAACCTTTGTGGACATAACTGTGCCAGTCCTTGCCACGATGGACCATGCCTCGACTCACCTTGCAAGGAAATGGTAAAGGTGACATGCGAGTGTGGCCACAGATTCACTACTCGAGCCTGCTTCGACAATGTGAAGGAGTACCAGCGTATGGCAACATCACTGTTGGCTTCCAAGATGGCGGACATGCAGTTAGGTCATTCTGTCGACATTGGTGACCTGCTTAGTAATCCAACCACTCGCAAAATGAGCCTTAAAACgcTTGAGTGCAATGATGAGTGCAAATTGATTGAAAGAAATAGACGTATGGCTATAGGGCTGCAGATTCGTAATCCTGATCTAAGCGCCAAATTGACGCCTCGCTATTCTGAGTTTATGCGACAGTGGGCGAAGAAAGACCCTAATTTATGTAACATGGTTCAAGAGAAGTTAACAGAACTAGTTCAGTTAGCCAAACAGtcGAAGCAAAAGAGTCGCAGCCACTCATTTGATCCGATGAACCGAGATAAACGTCAGTTTGTTCATGAGTATTGTGAACATTTTGGATGTGAGTCCATGGCTTATGATCAGGAGCCCAAACGTAATGTCGTAGCTATAGCTACAAGAGACAAGGTATTAATCTAA
Protein Sequence: MANWNRPNSYDSGRNPNYNFQSSEYSRRNPQQYGGGSTTLPYYSAPNEVGVSTSVQNTTLYETSGAPVFNAPTNYIDAHQSFPYFNDTADVSANLPQREANLALAASSSLTATAGEFIPRSTSALHSSSRNVMKNSVLHGGQDQQQSRQPDQDWRNNRVYKNSFTGYNRGQGNFARDDRNSSQPRRTNMEDAKSQDRSRLLAEAAAFLIPKPNQVMPGSSVFNENAGSVDTKSQNDAGATNPMTRRNFDSQQRSGENNKRIYTNPKYQNNTTYGNYTKSENFYQNPRRNTNTSGYTKQPQYYSQQGNDPRDRMPLTLETFGASQSYGRNHRTSHSNSGGEPFKNKEILVNQSALKRGAFHIENNDDEASQRERLVEQLTKGTLECLVCCDRVRQQDPVWSCRNCYHVLHLKCIKKWAKSSKVETGWRCPACQNVTEKVPQLYHCFCSKAIEPQWNRQDVPHTCGEMCGKTRDKPDCVHRCTLLCHPGPCPPCVAQVNRQCGCGATSKVVKCGGDKPLLCDALCGKELNCSVHKCARKCHMGECGNCEEIVSQACHCGKESRKIPCDLTSVGVTNFSCGGICEKNLTCGNHRCTLVCHTGPCGECELSPDKITHCPCGKTELTADQARNSCLDTIPNCPLICGKKLACGQPSGRQEGGFGKLPQLTGREAGRRVQRVTAVNQARGRKESSVSYRNEPDNPHHCEEKCHNGKCPSCPLSTLVKCRCGNMDREIPCIELTTRADDARCEKKCTKKRACGKHRCNQLCCIDVDHVCPMVCNHMLTCGQHRCDEPCHRGHCRPCWRTSFDELYCECGASVLYPPVPCGTRRPSCSKPCSRPHPCEHPPIHNCHSEPTCPLCTVLTQKYCYGKHELRKTIPCHQADFSCGLPCNKDLPCGRHHCILPCHKGPCLKEGQACTQPCTTTRNLCGHNCASPCHDGPCLDSPCKEMVKVTCECGHRFTTRACFDNVKEYQRMATSLLASKMADMQLGHSVDIGDLLSNPTTRKMSLKTLECNDECKLIERNRRMAIGLQIRNPDLSAKLTPRYSEFMRQWAKKDPNLCNMVQEKLTELVQLAKQSKQKSRSHSFDPMNRDKRQFVHEYCEHFGCESMAYDQEPKRNVVAIATRDKVLI*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01449158;
90% Identity: iTF_01449158;
80% Identity: -