Basic Information

Insect: Timema cristinae
Gene Symbol: stc
Assembly: GCA_002928295.1
Location: PGFK01001818.1:3720865-3754693[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 2 5.1e+04 -4.2 1.6 15 19 390 394 389 394 0.81

2 16 0.07 1.8e+03 0.5 0.3 4 10 423 429 422 431 0.94

3 16 2.3e-07 0.0057 18.1 13.5 4 18 440 454 438 455 0.94

4 16 1.5 3.8e+04 -3.7 0.4 6 10 481 485 481 486 0.93

5 16 2.4e-06 0.061 14.8 12.1 1 18 491 508 491 509 0.96

6 16 1.2 3e+04 -3.4 1.1 8 13 514 519 513 520 0.76

7 16 2.6e-08 0.00066 21.1 14.6 1 18 549 566 549 567 0.97

8 16 9.1e-06 0.23 13.0 15.3 4 19 616 631 609 631 0.87

9 16 1.4 3.5e+04 -3.6 2.0 5 10 660 665 660 665 0.93

10 16 0.00054 14 7.3 8.1 1 11 671 681 671 682 0.97

11 16 2 5.1e+04 -4.3 0.7 4 10 686 692 686 692 0.82

12 16 1.4e-08 0.00035 22.0 16.1 1 19 698 716 698 716 0.98

13 16 1.2 3e+04 -3.4 0.7 6 10 745 749 744 750 0.79

14 16 2 5.1e+04 -5.7 3.7 10 12 763 765 760 773 0.50

15 16 1.9e-07 0.0048 18.3 11.7 1 16 809 824 809 835 0.87

16 16 9.2e-07 0.023 16.1 13.2 1 19 841 860 841 860 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	2	5.1e+04	-4.2	1.6	15	19	390	394	389	394	0.81
2	16	0.07	1.8e+03	0.5	0.3	4	10	423	429	422	431	0.94
3	16	2.3e-07	0.0057	18.1	13.5	4	18	440	454	438	455	0.94
4	16	1.5	3.8e+04	-3.7	0.4	6	10	481	485	481	486	0.93
5	16	2.4e-06	0.061	14.8	12.1	1	18	491	508	491	509	0.96
6	16	1.2	3e+04	-3.4	1.1	8	13	514	519	513	520	0.76
7	16	2.6e-08	0.00066	21.1	14.6	1	18	549	566	549	567	0.97
8	16	9.1e-06	0.23	13.0	15.3	4	19	616	631	609	631	0.87
9	16	1.4	3.5e+04	-3.6	2.0	5	10	660	665	660	665	0.93
10	16	0.00054	14	7.3	8.1	1	11	671	681	671	682	0.97
11	16	2	5.1e+04	-4.3	0.7	4	10	686	692	686	692	0.82
12	16	1.4e-08	0.00035	22.0	16.1	1	19	698	716	698	716	0.98
13	16	1.2	3e+04	-3.4	0.7	6	10	745	749	744	750	0.79
14	16	2	5.1e+04	-5.7	3.7	10	12	763	765	760	773	0.50
15	16	1.9e-07	0.0048	18.3	11.7	1	16	809	824	809	835	0.87
16	16	9.2e-07	0.023	16.1	13.2	1	19	841	860	841	860	0.95

Sequence Information

Coding Sequence: ATGGCAAACTGGAATAGGCCAAATTCATATGATAATGGAAGAAACCCAAACTACAACTTTCAATCAAGCGAATATTCCAGACGAAATCCACAACAGTATGGAGGGGAGTCTACAACTCTACCTTATTACTCTGCCCCAAACGAAGTGGGTGTGTCTACCTCCGTAGAGAATACTACTTTGTATGAAACTTCAAGAGCACCCGTTTTAAACGCACCAACAAATTATATGGATGCACATCAGTTGTTTCCATATTTTAACGATACAGCTGACGTAAGTTCTAATCTTCCTCAAAGGGAAGCAAATTTTGCTCTTGCAGCTTCATCATCTTTGACTGCAACAGCTGGAGAGTTCATACCGAGATCAACATCTGCGCTGCACTCAAGTTCTCGAAATGTTATGAAAAATTCTGTTTTACATGGCGGCCAAGATCAACAGCAAACAAGACAACCTGACCAAGACTGGAGAAACAACCGGGTGTACAAAAATTCATTTACAGGCTATAATCGCGGCCAGGGTAACTTCGCAAGGGATGATAGAAACTCATCACAACCTAGGAGAACTAATATGGATGATTCAAAGAGTCAAGATCGTAGCAGATTATTGGCTGAAGCGGCAGCGTTTCTTATACCCAAACCCAACCAGGCCATGCCCGGATCTAGTGTTTCTAATGAAAATGCCGGGTCCGTTGATACCAAGTCTCAAAATGATGCCGGAGCTACAAACCCTATGGCGAGAAGGAATTTTGACTCCCAACAAAGAtcaggagaaaataataaaagaatctATACAAACCctaaatatcaaaacaatacAACTTATGGTAACTATCCTAAATCTGAAAACTTCTATCAGAATCCTAGAAGAAACACTAATATTTCTGGCTACACGAAGCAAGCACAGTATTACTCCCAGCACGGAAATGATCCTAGAGATAGTATGCCATTAACTCTAGAAACGTTTGGGGCATCTCAGAGCTATGATGATGAGGCAAGTCAGAGGGAGCGCCTTGTTGAGCAGTTGACTAAAGGCACACTGGAATGCTTGGTATGCTGTGACCGAGTTCGCCAACAAGATCCTGTGTGGAGCTGCAGGAATTGCTACCACGTGTTGCACCTTAAGTGCATCAAGAAGTGGGCCAAGTCTTCCAAAGTTGAAACTGGATGGCGCTGCCCTGCCTGCCAGAATGTCACAGAGAAGGTCCCACAGCTGTATCGCTGTTTCTGCAGCAAGGCGATTGAGCCCCAGTGGAATAGACAAGATGTCCCACACACTTGTGGCGAGATGTGTGGCAAGACTCGTGACAAACCGGATTGTGTGCATCGTTGCACTCTTCTCTGCCATCCGGGACCATGCCCCCCTTGTGTTGCTCAAGTAAACAGACAATGCGGCTGCGGTGCAACATCAAAAGTGGTGAAGTGTGGTGGAGACAAGCCACTACTTTGTGAAGCTCTGTGTGGCAAGGAGCTAAACTGTAGTGTACACAAGTGCACCAAGAAATGCCACATGGGAGAATGTGGCAATTGTGAAGAAATTGTCAGCCAAGCTTGCCATTGTGGCAAAGAGTCTCGGAAGATTGCCTGCGACCTCACCTCAGTCGGGGTGACAAACTTCTCCTGTGGAGGAATTTGTGAGAAGAATCTGACATGCGGGAACCACCAGTGCACTTTGGTGTGTCACACTGGCCCCTGTGGAGAGTGCGAGCTCTCCCCCGATAAGGTCACACACTGTCCTTGCGGTAAAACCGAGCTTACAGCAGACCAGGCCAGAAACAGCTGTCTGGATACCATTCCCAACTGTCCGCTCATCTGTGGCAAGAAGCTAGCTTGCGGTCAACCCAACAACCCCCACCAATGCAAAGAGAAGTGTCACAATGGCAAATGCCCTTCTTGCCCATTAAGTACGCTTGTGAAGTGTCGCTGCGGCAATATGGACAGAGAAATCCCATGTATTGAGCTCACCACACGAGCTGATGATGCCAGGTGTGAGAAAAAATGCACCAAGAAACGTGCATGTGGCAAACATCGTTGTAACCAGCTGTGCTGCATTGACGTTGATCACGTATGCCCCATGGTGTGCAACCACATGTTGACCTGCGGGCAGCACCGCTGTGATGAACCTTGCCACCGCGGACATTGCCGCCCCTGTTGGAGAACAAGTTTTGACGAGCTTTATTGTGAGTGTGGGGCAAGCGTGTTATACCCTCCGGTCCCCTGCGGCACAAGGCGTCCATCGTGCTCCAAGCCTTGCTCCAGACCCCACCCTTGTGAGCACCCACCGATCCACAACTGCCACAGCGAGCCGACTTGTCCACTGTGTACAGTGCTCACCCAGAAGTACTGCTATGGCAAGCATGAGCTTCGCAAGACCATTCCATGCCACCAGGCGGATTTCTCGTGCGGTCTCCCGTGCAACAAGGACTTGTCTTGTGGCCGCCACCGCTGCATCTTGCCATGTCACAAGGGCCCCTGTCTGAAAGAAGGTCAGGCGTGTACACAACCTTGCACCACCACAAGGAATCTCTGTGGACATAACTGTGCCAGTCCTTGCCACGATGGACCATGCCTCGACTCACCTTGCAAGGAAATGGTAAAGGTGACATGTGAGTGCGGCCACAGATTCACTACTCGAGCCTGCTTTGACAATGTGAAGGAGTACCAGCGTATGGCTACATCACTGTTGGCTTCCAAGATGGCGGACATGCAGTTAGGACATTCTGTTGACATTGGTGATCTGCTTAGTAATCCAACCACTCGCAAAATGAGCCTTAAAACgcttGAGTGCAATGATGAGTGCAAATTGATTGAAAGAAATAGACGTATGGCTATAGGGCTGCAGATTCGTAATCCTGATCTAAGCGCCAAATTGACGCCTCGTTATTCAGAGTTTATGCGACAGTGGGCAAAGAAAGACCCTAATTTATGTAACATGGTTCAAGAGAAGTTAACAGAACTAGTTCAGTTAGCCAAACAGtcgAAGCAAAAGAGTCGCAGCCACTCTTTTGATCCAATGAACCGAGACAAACGTCAGTTTGTTCATGAGTACTGTGAACATTTTGGATGCGAGTCCATTGCGTATGATCAGGAGCCCAAACGTAATGTCGTAGCGATAGCTACAAGAGATAAGGCTTGGCTTCCTAGCATGAGTTTGATGGAAGTTATTCAGCGAGAAAATGGTCAGCGGAAGATCCCAAAACCTGTTATTAATGCAAACAGAACCCCATCCCTCAGAACTATGGATGTATTACCTGTGAAATATTCTCAAGCGCACGCCATAAAAGCCCCTAGCCAAAACACACTTCAGCAAACAAAAGAAGAGCCTgatattgattattttgattttacacaGAAATAA
Protein Sequence: MANWNRPNSYDNGRNPNYNFQSSEYSRRNPQQYGGESTTLPYYSAPNEVGVSTSVENTTLYETSRAPVLNAPTNYMDAHQLFPYFNDTADVSSNLPQREANFALAASSSLTATAGEFIPRSTSALHSSSRNVMKNSVLHGGQDQQQTRQPDQDWRNNRVYKNSFTGYNRGQGNFARDDRNSSQPRRTNMDDSKSQDRSRLLAEAAAFLIPKPNQAMPGSSVSNENAGSVDTKSQNDAGATNPMARRNFDSQQRSGENNKRIYTNPKYQNNTTYGNYPKSENFYQNPRRNTNISGYTKQAQYYSQHGNDPRDSMPLTLETFGASQSYDDEASQRERLVEQLTKGTLECLVCCDRVRQQDPVWSCRNCYHVLHLKCIKKWAKSSKVETGWRCPACQNVTEKVPQLYRCFCSKAIEPQWNRQDVPHTCGEMCGKTRDKPDCVHRCTLLCHPGPCPPCVAQVNRQCGCGATSKVVKCGGDKPLLCEALCGKELNCSVHKCTKKCHMGECGNCEEIVSQACHCGKESRKIACDLTSVGVTNFSCGGICEKNLTCGNHQCTLVCHTGPCGECELSPDKVTHCPCGKTELTADQARNSCLDTIPNCPLICGKKLACGQPNNPHQCKEKCHNGKCPSCPLSTLVKCRCGNMDREIPCIELTTRADDARCEKKCTKKRACGKHRCNQLCCIDVDHVCPMVCNHMLTCGQHRCDEPCHRGHCRPCWRTSFDELYCECGASVLYPPVPCGTRRPSCSKPCSRPHPCEHPPIHNCHSEPTCPLCTVLTQKYCYGKHELRKTIPCHQADFSCGLPCNKDLSCGRHRCILPCHKGPCLKEGQACTQPCTTTRNLCGHNCASPCHDGPCLDSPCKEMVKVTCECGHRFTTRACFDNVKEYQRMATSLLASKMADMQLGHSVDIGDLLSNPTTRKMSLKTLECNDECKLIERNRRMAIGLQIRNPDLSAKLTPRYSEFMRQWAKKDPNLCNMVQEKLTELVQLAKQSKQKSRSHSFDPMNRDKRQFVHEYCEHFGCESIAYDQEPKRNVVAIATRDKAWLPSMSLMEVIQRENGQRKIPKPVINANRTPSLRTMDVLPVKYSQAHAIKAPSQNTLQQTKEEPDIDYFDFTQK*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01449158;
90% Identity: iTF_01449158;
80% Identity: -